HAO1 (hydroxyacid oxidase 1) - Rat Genome Database

Name: HAO1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

	Submit Data \| Help \| Video Tutorials \| News \| Publications \| Download \| REST API \| Citing RGD \| Contact
	Search RGD Grant Resources Citing RGD About Us Contact Us Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease Find Models new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive Pathways Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
	Advanced Search (OLGA)

Gene: HAO1 (hydroxyacid oxidase 1) Canis lupus familiaris

Analyze

Symbol:

HAO1

Name:

hydroxyacid oxidase 1

RGD ID:

12098574

Description:

ENCODES a protein that exhibits (S)-2-hydroxy-acid oxidase activity (inferred); FMN binding (inferred); glyoxylate oxidase activity (inferred); INVOLVED IN response to oxidative stress (ortholog); ASSOCIATED WITH Alagille syndrome (ortholog); calcium oxalate nephrolithiasis (ortholog); congenital myasthenic syndrome 18 (ortholog); FOUND IN intracellular membrane-bounded organelle (inferred); peroxisomal matrix (inferred); peroxisome (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

RGD Orthologs

Human

Mouse

Rat

Chinchilla

Bonobo

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	HAO1 (hydroxyacid oxidase 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Hao1 (hydroxyacid oxidase 1, liver)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Hao1 (hydroxyacid oxidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Hao1 (hydroxyacid oxidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	HAO1 (hydroxyacid oxidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Hao1 (hydroxyacid oxidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	HAO1 (hydroxyacid oxidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	HAO1 (hydroxyacid oxidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Hao1 (hydroxyacid oxidase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	14,204,543 - 14,252,873 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	14,204,617 - 14,252,191 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	14,026,777 - 14,075,130 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	14,605,063 - 14,653,411 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	14,605,124 - 14,653,421 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	14,214,061 - 14,262,313 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	14,324,157 - 14,372,478 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	14,653,607 - 14,701,967 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Alagille syndrome (ISO)

calcium oxalate nephrolithiasis (ISO)

congenital myasthenic syndrome 18 (ISO)

developmental and epileptic encephalopathy 12 (ISO)

Experimental Liver Cirrhosis (ISO)

genetic disease (ISO)

nephrolithiasis (ISO)

Prostatic Neoplasms (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

fatty acid alpha-oxidation (IBA,IEA)

glycolate catabolic process (IEA)

response to oxidative stress (ISO)

Cellular Component

intracellular membrane-bounded organelle (IEA)

peroxisomal matrix (IEA)

peroxisome (IBA,IEA)

Molecular Function

(S)-2-hydroxy-acid oxidase activity (IEA)

FMN binding (IEA)

glyoxylate oxidase activity (IEA)

oxidoreductase activity (IEA)

References

Genomics

Comparative Map Data

HAO1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	14,204,543 - 14,252,873 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	14,204,617 - 14,252,191 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	14,026,777 - 14,075,130 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	14,605,063 - 14,653,411 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	14,605,124 - 14,653,421 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	14,214,061 - 14,262,313 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	14,324,157 - 14,372,478 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	14,653,607 - 14,701,967 (+)	NCBI		UU_Cfam_GSD_1.0

HAO1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	7,882,985 - 7,940,458 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	20	7,882,985 - 7,940,458 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	20	7,863,632 - 7,921,105 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	7,811,631 - 7,869,093 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	20	7,811,630 - 7,869,093	NCBI
Celera	20	7,933,209 - 7,990,669 (-)	NCBI		Celera
Cytogenetic Map	20	p12.3	NCBI
HuRef	20	7,814,621 - 7,872,059 (-)	NCBI		HuRef
CHM1_1	20	7,864,109 - 7,921,570 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	20	7,924,797 - 7,982,271 (-)	NCBI		T2T-CHM13v2.0

Hao1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	134,339,281 - 134,396,272 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	134,339,281 - 134,396,288 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	134,497,361 - 134,554,352 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	134,497,361 - 134,554,368 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	134,323,097 - 134,380,088 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	134,188,802 - 134,245,793 (-)	NCBI		MGSCv36	mm8
Celera	2	135,711,108 - 135,768,145 (-)	NCBI		Celera
Cytogenetic Map	2	F2	NCBI
cM Map	2	65.65	NCBI

Hao1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	121,757,400 - 121,828,721 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	121,771,836 - 121,828,721 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	125,674,380 - 125,731,284 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	3	134,287,471 - 134,345,573 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	3	131,930,568 - 131,987,464 (-)	NCBI	Rnor_WKY
Rnor_6.0	3	127,444,900 - 127,500,709 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	127,444,902 - 127,500,709 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	133,932,667 - 133,988,954 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	122,506,916 - 122,564,012 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	3	120,530,658 - 120,586,825 (-)	NCBI		Celera
Cytogenetic Map	3	q36	NCBI

Hao1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955415	17,981,791 - 18,035,224 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955415	17,981,791 - 18,035,151 (-)	NCBI	ChiLan1.0	ChiLan1.0

HAO1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	20	7,637,582 - 7,695,120 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	7,633,861 - 7,695,120 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	20	7,856,967 - 7,914,818 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

Hao1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	163,001,985 - 163,055,075 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936485	11,435,151 - 11,486,042 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936485	11,435,151 - 11,486,042 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HAO1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	16,744,442 - 16,802,442 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	16,746,153 - 16,802,460 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	18,814,432 - 18,870,834 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

HAO1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	30,183,031 - 30,238,663 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	30,183,705 - 30,240,231 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666071	14,314,987 - 14,370,752 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Hao1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624741	8,763,496 - 8,824,468 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624741	8,762,556 - 8,824,517 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in HAO1
593 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium			6	6		6
Low
Below cutoff	5	3	12		5		6	10	8	6	5

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038432854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038509620	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038571362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038635558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_542897	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000261	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000063	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSCAFT00000009507 ⟹ ENSCAFP00000008826

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	24	14,204,617 - 14,252,191 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845047457 ⟹ ENSCAFP00845037234

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	24	14,605,124 - 14,653,421 (+)	Ensembl

RefSeq Acc Id:

XM_038432854 ⟹ XP_038288782

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	24	14,605,063 - 14,653,411 (+)	NCBI

RefSeq Acc Id:

XM_038509620 ⟹ XP_038365548

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	24	14,214,061 - 14,262,313 (+)	NCBI

RefSeq Acc Id:

XM_038571362 ⟹ XP_038427290

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	24	14,653,607 - 14,701,967 (+)	NCBI

RefSeq Acc Id:

XM_038635558 ⟹ XP_038491486

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	24	14,324,157 - 14,372,478 (+)	NCBI

RefSeq Acc Id:

XM_542897 ⟹ XP_542897

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	24	14,204,543 - 14,252,873 (+)	NCBI
Dog10K_Boxer_Tasha	24	14,026,777 - 14,075,130 (+)	NCBI

Sequence:

show sequence

GACAGCTAGTGGAATTATCAAAATGTAGAAGGCTATGAACAGGGAAAAAAAAAAAACCCAAACC
TGGGGTCACAATAACCTGTGAAAATGTTTACGCGGTTAGTTTGTATCAGTGATTATGAACAAAA
TGCAAAATCAGTACTTCAGAAGTCGATATATGACTATTACAGGTCCGGGGCAAATGATCAGGAA
ACATTGGCTGATAATATTGCAGCATTTTCCAGATGGAAGCTGTATCCGCGGATGCTCCGGAATG
TTGCTGAGATAGACCTGTCGACTTCTGTTTTGGGTCAGAGAGTCAGCATGCCAATATGTGTTGG
GGCTACTGCCATGCAGTGCATGGCTCACGTGGATGGGGAGCTCGCAACTGTGCGAGCCTGCAGG
TCACTGGGAACTGGAATGATGCTGAGTTCCTGGTCCACCTCCTCAATTGAAGAAGTGGCAGAGG
CCAGTCCTGATGCACTGCGCTGGCTGCAACTGTACATCTACAAGGACCGTGAGGTCACCAAGCA
GCTAGTGCAGCGGGCTGAGCGAAAGGGCTACAAGGCCATATTTTTGACAGTGGACACTCCTTAC
CTGGGGAACCGCTTTGACGATGTGCGTAATAGGTTCAAGCTGCCACCTCAACTCAGGATGAAAA
ATTTTGAAACCAATGATTTAGCATTTTCTCCTAAGGAAAATTTTGGAGACAACAGTGGACTTGC
TACGTATGTTGCTAAATCAATAGACCCATCGATCAGCTGGGAGGATATTAAATGGCTGAGGGGG
CTGACCTCACTGCCAATTGTTGCAAAAGGCATTTTGAGAGGTGATGACGCCAAGGAGGCAGTTA
AACATGGTTTGAATGGGATATTGGTGTCGAATCATGGAGCTCGACAACTTGATGGGGTGCCAGC
CACTATTGATGCTCTGCCAGAAATCGTGGAGGCTGTGGAAGGGAAGGTGGAGATCTTCCTGGAT
GGAGGTGTTCGGAAAGGCACCGATGTTCTGAAAGCTCTGGCCCTGGGAGCCAAGGCTGTGTTTG
TGGGGAGACCAGTCATCTGGGGCTTGGCTTCACAGGGAGAGAAAGGTGTTCAAGATGTCCTTGA
GATACTAAAGGAAGAATTCCGATTGGCCATGGCTTTGAGTGGGTGCCAGAATGTGAAAGTCATC
GACAAGACATTGGTGAGGAAAAATCCTTTGGCCGTTTCCAAGATCTGACAGTGCACAATATTTT
CCCATCTGTATTATTTTTTTTCGGCATGTATTACTTGACAAAGAGACACTGTGCAGAGAGTGAC
CACAGTCTGCAATCCCCCACTTCAACACAAAGGGTGTCGTTCTTCTCCAACAAAATAGCAATCC
CTTTGAGCTCATTGCTTTTGACTTTTCAATGGGTGTCCTAGGAACCTTTTAGAAAGAAATGGAC
TTGCATCCTGGAAATATATTAACTGTTAAAAAGAAAACATTGAAAATGTGTTTAGACAACGTCA
TCCCCTGGCAGGCTAAAGGGCTGAAAAACAAAAGATAGCCTTTGGTAAAATTGGAGGTAGCTAC
ACTGAGGTAAAAAGATAATGATCTCACTGTTTATTAACCCACATTGTGTTTAGATGTCCTTAAA
GCAGCGTTCCTAAATTGTAAGCTCAGGTTCAAAAGGTTGGATATGCCTAGAGAAACAGGAGATT
TAGATTTCCCAACACTGAGGAGTCAGCTCTTGATAGAATTGTGATGAGTTGGTGGTAATTTGTG
ACTTTCTAGATACTTTTTAACCCCCTGACTTATGCTACTTCTTTGAATGTAGATTTCTCTTCCT
ATCTTTAGTGTTTGCATATATCTGAATGTTTTATGCTATGTATATTGCTTCTTAATCAGAAATA
AATAAAGCATTTTTGAAAAGAATCTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038288782	(Get FASTA)	NCBI Sequence Viewer
	XP_038365548	(Get FASTA)	NCBI Sequence Viewer
	XP_038427290	(Get FASTA)	NCBI Sequence Viewer
	XP_038491486	(Get FASTA)	NCBI Sequence Viewer
	XP_542897	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	XP_542897 ⟸ XM_542897
- Peptide Label:	isoform X1
- UniProtKB:	F6XM23 (UniProtKB/TrEMBL), A0A8C0P5I9 (UniProtKB/TrEMBL), A0A8I3PUM1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFTRLVCISDYEQNAKSVLQKSIYDYYRSGANDQETLADNIAAFSRWKLYPRMLRNVAEIDLST SVLGQRVSMPICVGATAMQCMAHVDGELATVRACRSLGTGMMLSSWSTSSIEEVAEASPDALRW LQLYIYKDREVTKQLVQRAERKGYKAIFLTVDTPYLGNRFDDVRNRFKLPPQLRMKNFETNDLA FSPKENFGDNSGLATYVAKSIDPSISWEDIKWLRGLTSLPIVAKGILRGDDAKEAVKHGLNGIL VSNHGARQLDGVPATIDALPEIVEAVEGKVEIFLDGGVRKGTDVLKALALGAKAVFVGRPVIWG LASQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVRKNPLAVSKI hide sequence

RefSeq Acc Id:

ENSCAFP00000008826 ⟸ ENSCAFT00000009507

RefSeq Acc Id:	XP_038365548 ⟸ XM_038509620
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038491486 ⟸ XM_038635558
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038288782 ⟸ XM_038432854
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0P5I9 (UniProtKB/TrEMBL), A0A8I3PUM1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038427290 ⟸ XM_038571362
- Peptide Label:	isoform X1

RefSeq Acc Id:

ENSCAFP00845037234 ⟸ ENSCAFT00845047457

Protein Domains

FMN hydroxy acid dehydrogenase

Promoters

RGD ID:

13687524

Promoter ID:

EPDNEW_C5591

Type:

initiation region

Name:

HAO1_1

Description:

hydroxyacid oxidase 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	24	14,204,614 - 14,204,674	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000005890	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030020931	UniProtKB/TrEMBL
	ENSCAFG00845026925	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSCAFP00000008826.3	UniProtKB/TrEMBL
	ENSCAFP00030033501.1	UniProtKB/TrEMBL
	ENSCAFP00845037234	ENTREZGENE
	ENSCAFP00845037234.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000009507.5	UniProtKB/TrEMBL
	ENSCAFT00030038401.1	UniProtKB/TrEMBL
	ENSCAFT00845047457	ENTREZGENE
	ENSCAFT00845047457.1	UniProtKB/TrEMBL
Gene3D-CATH	3.20.20.70	UniProtKB/TrEMBL
InterPro	Aldolase_TIM	UniProtKB/TrEMBL
	Alpha-hydoxy_acid_DH_FMN	UniProtKB/TrEMBL
	FMN-dep_DH	UniProtKB/TrEMBL
	FMN_HAD	UniProtKB/TrEMBL
	FMN_hydac_DH_AS	UniProtKB/TrEMBL
NCBI Gene	HAO1	ENTREZGENE
PANTHER	HYDROXYACID OXIDASE 1	UniProtKB/TrEMBL
	S -2-HYDROXY-ACID OXIDASE-RELATED	UniProtKB/TrEMBL
Pfam	FMN_dh	UniProtKB/TrEMBL
PIRSF	Al-hdrx_acd_dh	UniProtKB/TrEMBL
PROSITE	FMN_HYDROXY_ACID_DH_1	UniProtKB/TrEMBL
	FMN_HYDROXY_ACID_DH_2	UniProtKB/TrEMBL
Superfamily-SCOP	FMN-linked oxidoreductases	UniProtKB/TrEMBL
UniProt	A0A8C0P5I9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PUM1	ENTREZGENE, UniProtKB/TrEMBL
	F6XM23	ENTREZGENE
VGNC ID	VGNC:41590	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD