GORASP1 (golgi reassembly stacking protein 1)

Gene: GORASP1 (golgi reassembly stacking protein 1) Canis lupus familiaris

Analyze

Symbol:

GORASP1

Name:

golgi reassembly stacking protein 1

RGD ID:

12098556

Description:

INVOLVED IN establishment of protein localization to plasma membrane (ortholog); Golgi organization (ortholog); Golgi ribbon formation (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN Golgi apparatus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

Golgi reassembly-stacking protein 1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	8,766,243 - 8,776,278 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	8,766,243 - 8,776,288 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	8,805,904 - 8,816,000 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	9,054,839 - 9,064,948 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	9,053,432 - 9,064,954 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	8,868,535 - 8,878,620 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	9,010,792 - 9,020,892 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	9,004,214 - 9,014,311 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

establishment of protein localization to plasma membrane (ISO)

Golgi organization (IEA,ISO)

Golgi ribbon formation (ISO)

negative regulation of dendrite morphogenesis (ISO)

protein N-linked glycosylation (ISO)

Cellular Component

Golgi apparatus (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

GORASP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	8,766,243 - 8,776,278 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	8,766,243 - 8,776,288 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	8,805,904 - 8,816,000 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	9,054,839 - 9,064,948 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	9,053,432 - 9,064,954 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	8,868,535 - 8,878,620 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	9,010,792 - 9,020,892 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	9,004,214 - 9,014,311 (-)	NCBI		UU_Cfam_GSD_1.0

GORASP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	39,096,599 - 39,107,627 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	39,095,222 - 39,108,369 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	39,138,090 - 39,149,118 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	39,113,095 - 39,124,134 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	39,113,094 - 39,124,134	NCBI
Celera	3	39,078,594 - 39,089,634 (-)	NCBI		Celera
Cytogenetic Map	3	p22.2	NCBI
HuRef	3	39,180,011 - 39,191,775 (-)	NCBI		HuRef
CHM1_1	3	39,089,163 - 39,100,931 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	39,108,763 - 39,119,791 (-)	NCBI		T2T-CHM13v2.0

Gorasp1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	119,754,739 - 119,766,624 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	119,754,323 - 119,766,631 (-)	Ensembl		GRCm39 Ensembl
GRCm38	9	119,925,673 - 119,937,558 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	119,925,257 - 119,937,565 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	119,834,791 - 119,846,676 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	119,774,371 - 119,786,256 (-)	NCBI		MGSCv36	mm8
Celera	9	120,392,893 - 120,404,786 (-)	NCBI		Celera
Cytogenetic Map	9	F4	NCBI
cM Map	9	71.33	NCBI

Gorasp1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	128,532,933 - 128,544,686 (-)	NCBI		GRCr8
mRatBN7.2	8	119,655,267 - 119,667,022 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	119,655,268 - 119,666,972 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	125,236,740 - 125,248,426 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	123,435,787 - 123,447,473 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	121,268,521 - 121,280,226 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	128,610,290 - 128,622,337 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	128,610,291 - 128,622,337 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	127,811,973 - 127,824,020 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	124,883,445 - 124,895,149 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	124,903,186 - 124,914,863 (-)	NCBI
Celera	8	118,802,215 - 118,813,913 (-)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

Gorasp1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955427	24,862,346 - 24,870,651 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955427	24,862,253 - 24,873,710 (+)	NCBI	ChiLan1.0	ChiLan1.0

GORASP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	39,048,191 - 39,059,226 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	39,052,953 - 39,063,985 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	38,992,863 - 39,004,586 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	39,273,272 - 39,285,008 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	39,273,272 - 39,285,008 (-)	Ensembl	panpan1.1		panPan2

Gorasp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	195,213,155 - 195,223,471 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936473	28,353,485 - 28,361,977 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936473	28,351,669 - 28,362,062 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GORASP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	23,786,248 - 23,797,487 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	23,786,245 - 23,797,508 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	26,045,884 - 26,057,044 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GORASP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	308,445 - 319,309 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	308,649 - 317,728 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	9,035,490 - 9,046,715 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gorasp1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	1,873,466 - 1,883,462 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624731	1,873,474 - 1,884,712 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in GORASP1
165 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	5	5	22	6	6	6	6	6	12		10	6
Low										8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005634254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014106639	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038431920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038431921	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038431922	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038457001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038457002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038507234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038507235	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038507236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038570476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038570477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038570478	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038634653	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038634654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038634655	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000256	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000008174 ⟹ ENSCAFP00000007572

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	23	8,766,243 - 8,776,283 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000065728 ⟹ ENSCAFP00000066443

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	23	8,766,243 - 8,776,253 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000065883 ⟹ ENSCAFP00000044921

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	23	8,766,243 - 8,776,288 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000070271 ⟹ ENSCAFP00000053954

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	23	8,766,243 - 8,776,253 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000071896 ⟹ ENSCAFP00000064182

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	23	8,767,526 - 8,776,288 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845054185 ⟹ ENSCAFP00845042570

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	23	9,053,432 - 9,064,954 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845054193 ⟹ ENSCAFP00845042576

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	23	9,053,432 - 9,064,870 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845054199 ⟹ ENSCAFP00845042580

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	23	9,053,432 - 9,064,870 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845054208 ⟹ ENSCAFP00845042587

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	23	9,054,844 - 9,064,612 (-)	Ensembl

RefSeq Acc Id:

XM_005634254 ⟹ XP_005634311

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	8,766,243 - 8,776,278 (-)	NCBI
Dog10K_Boxer_Tasha	23	8,805,904 - 8,816,000 (-)	NCBI

Sequence:

show sequence

CGTCCGGGACCCGGGCGCCGCCGCCATGGGCCTGGGCGCCAGCGCCGAGCAGTCCCCGGGCGGC
GCCGAGGGCTTCCACCTGCACGGGGTGCAGGAGAACTCGCCAGCCCAGCAAGCGGGCCTGGAGC
CCTACTTTGATTTCATCGTCACCATCGGGCACTCGAGGCTGAACAAGGAGAATGACACACTGAA
GGCTCTGCTGAAGGCCAATGTGGAGAAGCCTGTGAAGCTGGAGGTGTTCAATATGAAGACCATG
AAGCTGCGCGAGGTGGAGGTGGTACCCAGCAACATGTGGGGTGGCCAGGGCCTGCTGGGAGCCA
GCGTGCGCTTCTGCAGCTTCCGCAGGGCAAGCGAGCACGTGTGGCATGTGCTGGACGTGGAACC
CTCTTCACCTGCCTCACTGGCTGGCCTGCGCCCCTACACAGACTATGTGGTTGGTTCAGATCAG
ATCCTCCAGGAGTCCGAGGACTTCTTTACACTCATCGAGTCCCACGAGGGGAAGCCCTTGAAGC
TGATGGTTTACAACTCCGAGTCCGACTCCTGCCGGGAGGTGACTGTAACTCCCAACGCAGCCTG
GGGTGGAGAGGGCAGTCTGGGGTGTGGTATCGGCTATGGGTATCTGCACCGGATCCCAACCCAG
CCTTCCAGCCACCACAAGAAGCCACCTGGTACCCCGCCACCTGATGACCTGCCACCTGATATCC
CACCAGCCAGACCCACACCCCAGGACTCTCCTGCCCCTCCTGGCCCAGAAAGAGGCTCCGGGCA
GGGTGACTACATGGAGGCCCTGCTGCAGGCGCCCGGCTCCTCCATGGAGGGACAGCTTTCTGAG
CCTGGGAGTCCCAGCCTCGGCGCTCCAGACCTTGGGGGACTTCCATGTCCCATGGAGACTCTTC
AGCCTCCACCTCCAGTGCAGCGCGTCATGGACCCAGGCTTCCTGGACGTGTCGGGTATCTCCCT
CTTGGACAGCAGCAATGCCAGTGTCTGGCCCAGTCTGCCCTCTTCCACAGAGCTGATCTCCACA
GCTCTCTCAGCCTCCGGGCCTGAGGACGTCTCCAGCAGTGGTTCTCACGAGCGTGGTGGTGAGG
CCACATGGTCTGGATCAGAGTTTGAGGTCTCCTTCCCGGACAGCCCAGGCATCCAGGCCCAGCC
AGACCACCTGCCTCAGCTAACCCTTCCTGACAGCCTCACCTTTGCAGCCTCACCAGAAGATGGG
CTGTCTGCTGAGCTGCTCGAAGCACAGGCTGAGGAGGAGCCGGCAAGCACAGAGAGTCCAGATT
TCGGGGCAGAGGCTAAGGGGGCAGCCAGCCAGGCCCAGCTCTCCACCCCCGAATAACACCGTAG
GCTGTGTTGAGGCCCCTGATGGCATCTCATGAGGCCTAGATGTGGGGAAGCAGCTTAGGCTACA
CTATGCAGCCCAGTCCCTCCCTGATCCCGGCCCAGCACATACAGCTTCCTAGGCAGTGGCTCCC
CGGATGTGCAGTGACTTCTGCAGGGGAGGGCTTGTGTGTCCACATAGACCCTCCTGGTGTCCAA
GAATGACCTCCCAGCATTAATTCTGCCTGATGGTCCTGGCTTTGGGGAATCTTGGGGCAGTGGG
GGGCTGGGAGCAGTGCCCAGATGAAGTTTTGCAGGAGCTGGGGTAGGAGAGGAAAGGATTCTGC
TGCTTGGGTGGTGCAGAGAGCTTCAGGGGGTAGGAGGAGGCAGCGTGGGCCTGGAGGAAGGGCA
TCTTTTGGCCGCATAGCTTGAAGTCCAGTGCTCCTGCTCTGGTCACTCTGGCCGCCCTGGAGAC
AGCAGGGTCCACACAGGGTCAGGTGTGCACATGGAGCGGAGGAGCAGGGAATAGGTTGGAGTGT
TTGCCTGACATTTCGTAGGGCTTGCCTTCAATCTCGTACAGCTCAGCTAGCCGTGTGTGTGCTG
GAAGGCAACCCCCTGCCCTGGGGACCCCTGAAACCCCCGTGACTGTCCTGTCATGTGCTCTCAT
CTCTGTGCTACACTCCACAGTTGGCTCAGGCTGACCTGCACCATCCCAGCTGGAGAGAAGCAGT
AAGCTTGTCCACCTCTCTGGAGAGACGGGCTGGAAATTTAGGCCCTTCAGCAAAGACTCACTTG
TTCTTGGACTACAATGTTCTTCCCCAGGGCCTCCACCCCACAGGACCCCATATCCCTAGTGGTG
ACTTCTTTTGGCTCCCAACCTTAATTAAGACAACCATCTCTTCTAAACATAAAGGGCATCTGGT
CAGTCCCAGTGGTGAATAAAAATGGCAAATTTAAGTTCACCATCCTAAGTAGACTCTCAAAGCT
GGTCCTGACTTTATACATAGCTCTTTATACATAGCTCCCACGCAAAGGGGGAATGAGGGGCCTG
GGACTAGAAGCCATTCTAGTCTTTCCCACAGTATGGGAGGAGGCTGTTCCCTCCACCACAGGTG
CCCCGAGAGGCTGAGACCAGGCCAGGTCTTCGGCCCTACCTGGTTTATGAAGGAAGAGGAGGGC
TCCATGCAGGAACAGCTCCACCTCCCCTCACCTTCCCACATGCTGGTTGCCATGAAAGCTGCCT
CTGGCCTGGTCTTCTAGTTGCTACCCAGTTAAAAGTTCCGCCTCTGCCGCTTGATCTGTAATGT
GTGCACTTAACAGGGCATTCAGAGTTGTTAGGCCCATAGGACAAGGACTGTCTGCTTTGGGGGG
CACAGACCCAAGTATATGCAGGGAGGGCCCCCAATAAGCAAACACTAAAGATTTCTAGCACTGC
CACTGCTTTTAAAGGCAGCCCTTGTTGAGCCTACCAGAGCAGCTGATACGCCTGCAGAACAGGG
AGCCATTGTGTCTGAAACCGGGGCTGGAGCTTGTTTCTTGAATTGTCTGGGAGCCCAGTATCTG
CCTGGAGGAATCCAGGAAGTAGAAGACAACCTCCACAGGACTAGCCGGAGGCCAGCTTCGTGAA
CTGCAGCCTGGCAGCCTGGCCCAAGGTCCCCCTCGCCCTAGGATGCTGGCTCTTCCTTCCCTCC
TTTTACACACTCCCCACCCTACACAGGGGGATACAGTGGGTACTGACTCTAATTATTGCCAGGA
TAAACATGGAACCAGACGTTTCTCTGTAACCTGCTATGAAGGAAAATGACAAGTGATTAAGAAA
TAAATGTGTACTACACTGAAA

hide sequence

RefSeq Acc Id:

XM_038431920 ⟹ XP_038287848

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	23	9,054,839 - 9,064,948 (-)	NCBI

RefSeq Acc Id:

XM_038431921 ⟹ XP_038287849

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	23	9,056,569 - 9,064,614 (-)	NCBI

RefSeq Acc Id:

XM_038431922 ⟹ XP_038287850

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	23	9,056,569 - 9,064,883 (-)	NCBI

RefSeq Acc Id:

XM_038457001 ⟹ XP_038312929

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	23	8,807,634 - 8,815,668 (-)	NCBI

RefSeq Acc Id:

XM_038457002 ⟹ XP_038312930

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	23	8,807,634 - 8,815,935 (-)	NCBI

RefSeq Acc Id:

XM_038507234 ⟹ XP_038363162

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	23	8,868,535 - 8,878,620 (-)	NCBI

RefSeq Acc Id:

XM_038507235 ⟹ XP_038363163

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	23	8,870,265 - 8,878,288 (-)	NCBI

RefSeq Acc Id:

XM_038507236 ⟹ XP_038363164

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	23	8,870,265 - 8,878,555 (-)	NCBI

RefSeq Acc Id:

XM_038570476 ⟹ XP_038426404

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	23	9,004,214 - 9,014,311 (-)	NCBI

RefSeq Acc Id:

XM_038570477 ⟹ XP_038426405

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	23	9,005,944 - 9,013,977 (-)	NCBI

RefSeq Acc Id:

XM_038570478 ⟹ XP_038426406

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	23	9,005,944 - 9,014,246 (-)	NCBI

RefSeq Acc Id:

XM_038634653 ⟹ XP_038490581

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	23	9,010,792 - 9,020,892 (-)	NCBI

RefSeq Acc Id:

XM_038634654 ⟹ XP_038490582

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	23	9,012,522 - 9,020,560 (-)	NCBI

RefSeq Acc Id:

XM_038634655 ⟹ XP_038490583

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	23	9,012,522 - 9,020,827 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005634311	(Get FASTA)	NCBI Sequence Viewer
	XP_038287848	(Get FASTA)	NCBI Sequence Viewer
	XP_038287849	(Get FASTA)	NCBI Sequence Viewer
	XP_038287850	(Get FASTA)	NCBI Sequence Viewer
	XP_038312929	(Get FASTA)	NCBI Sequence Viewer
	XP_038312930	(Get FASTA)	NCBI Sequence Viewer
	XP_038363162	(Get FASTA)	NCBI Sequence Viewer
	XP_038363163	(Get FASTA)	NCBI Sequence Viewer
	XP_038363164	(Get FASTA)	NCBI Sequence Viewer
	XP_038426404	(Get FASTA)	NCBI Sequence Viewer
	XP_038426405	(Get FASTA)	NCBI Sequence Viewer
	XP_038426406	(Get FASTA)	NCBI Sequence Viewer
	XP_038490581	(Get FASTA)	NCBI Sequence Viewer
	XP_038490582	(Get FASTA)	NCBI Sequence Viewer
	XP_038490583	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000007572.4
	ENSCAFP00000053954.1
	ENSCAFP00000069279.1
	ENSCAFP00000075354.1
	ENSCAFP00030018303.1
	ENSCAFP00040030200.1
	ENSCAFP00040030325.1
	ENSCAFP00040030363.1
	ENSCAFP00845042570
	ENSCAFP00845042570.1
	ENSCAFP00845042576
	ENSCAFP00845042576.1
	ENSCAFP00845042580.1
	ENSCAFP00845042587.1

RefSeq Acc Id:	XP_005634311 ⟸ XM_005634254
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0N6S9 (UniProtKB/TrEMBL), A0A8C0LMR1 (UniProtKB/TrEMBL), A0A8C0T1G0 (UniProtKB/TrEMBL), A0A8I3Q4E7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGLGASAEQSPGGAEGFHLHGVQENSPAQQAGLEPYFDFIVTIGHSRLNKENDTLKALLKANVE KPVKLEVFNMKTMKLREVEVVPSNMWGGQGLLGASVRFCSFRRASEHVWHVLDVEPSSPASLAG LRPYTDYVVGSDQILQESEDFFTLIESHEGKPLKLMVYNSESDSCREVTVTPNAAWGGEGSLGC GIGYGYLHRIPTQPSSHHKKPPGTPPPDDLPPDIPPARPTPQDSPAPPGPERGSGQGDYMEALL QAPGSSMEGQLSEPGSPSLGAPDLGGLPCPMETLQPPPPVQRVMDPGFLDVSGISLLDSSNASV WPSLPSSTELISTALSASGPEDVSSSGSHERGGEATWSGSEFEVSFPDSPGIQAQPDHLPQLTL PDSLTFAASPEDGLSAELLEAQAEEEPASTESPDFGAEAKGAASQAQLSTPE hide sequence

RefSeq Acc Id:

ENSCAFP00000053954 ⟸ ENSCAFT00000070271

RefSeq Acc Id:

ENSCAFP00000007572 ⟸ ENSCAFT00000008174

RefSeq Acc Id:

ENSCAFP00000044921 ⟸ ENSCAFT00000065883

RefSeq Acc Id:

ENSCAFP00000066443 ⟸ ENSCAFT00000065728

RefSeq Acc Id:

ENSCAFP00000064182 ⟸ ENSCAFT00000071896

RefSeq Acc Id:	XP_038363162 ⟸ XM_038507234
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038363164 ⟸ XM_038507236
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038363163 ⟸ XM_038507235
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038490581 ⟸ XM_038634653
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038490583 ⟸ XM_038634655
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038490582 ⟸ XM_038634654
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038287848 ⟸ XM_038431920
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0N6S9 (UniProtKB/TrEMBL), A0A8C0LMR1 (UniProtKB/TrEMBL), A0A8C0T1G0 (UniProtKB/TrEMBL), A0A8I3Q4E7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038287850 ⟸ XM_038431922
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3S7N6 (UniProtKB/TrEMBL), A0A8P0SAS7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038287849 ⟸ XM_038431921
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3S7N6 (UniProtKB/TrEMBL), A0A8P0SAS7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038312930 ⟸ XM_038457002
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3S7N6 (UniProtKB/TrEMBL), A0A8P0SAS7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038312929 ⟸ XM_038457001
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3S7N6 (UniProtKB/TrEMBL), A0A8P0SAS7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038426404 ⟸ XM_038570476
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LMR1 (UniProtKB/TrEMBL), A0A8C0N6S9 (UniProtKB/TrEMBL), A0A8C0T1G0 (UniProtKB/TrEMBL), A0A8I3Q4E7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038426406 ⟸ XM_038570478
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3S7N6 (UniProtKB/TrEMBL), A0A8P0SAS7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038426405 ⟸ XM_038570477
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3S7N6 (UniProtKB/TrEMBL), A0A8P0SAS7 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845042570 ⟸ ENSCAFT00845054185

RefSeq Acc Id:

ENSCAFP00845042580 ⟸ ENSCAFT00845054199

RefSeq Acc Id:

ENSCAFP00845042587 ⟸ ENSCAFT00845054208

RefSeq Acc Id:

ENSCAFP00845042576 ⟸ ENSCAFT00845054193

Protein Domains

PDZ GRASP-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000005080	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030011268	UniProtKB/TrEMBL
	ENSCAFG00040018695	UniProtKB/TrEMBL
	ENSCAFG00845030523	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000008174.5	UniProtKB/TrEMBL
	ENSCAFT00000070271.2	UniProtKB/TrEMBL
	ENSCAFT00000094592.1	UniProtKB/TrEMBL
	ENSCAFT00000106218.1	UniProtKB/TrEMBL
	ENSCAFT00030020989.1	UniProtKB/TrEMBL
	ENSCAFT00040034674.1	UniProtKB/TrEMBL
	ENSCAFT00040034828.1	UniProtKB/TrEMBL
	ENSCAFT00040034872.1	UniProtKB/TrEMBL
	ENSCAFT00845054185	ENTREZGENE
	ENSCAFT00845054185.1	UniProtKB/TrEMBL
	ENSCAFT00845054193	ENTREZGENE
	ENSCAFT00845054193.1	UniProtKB/TrEMBL
	ENSCAFT00845054199.1	UniProtKB/TrEMBL
	ENSCAFT00845054208.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.42.10	UniProtKB/TrEMBL
InterPro	GRASP55_65	UniProtKB/TrEMBL
	GRASP_PDZ	UniProtKB/TrEMBL
	PDZ_sf	UniProtKB/TrEMBL
KEGG Report	cfa:485594	UniProtKB/TrEMBL
NCBI Gene	GORASP1	ENTREZGENE
PANTHER	GOLGI REASSEMBLY-STACKING PROTEIN 1	UniProtKB/TrEMBL
	PTHR12893	UniProtKB/TrEMBL
Pfam	GRASP55_65	UniProtKB/TrEMBL
PROSITE	PDZ_GRASP	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50156	UniProtKB/TrEMBL
UniProt	A0A8C0LMR1	ENTREZGENE
	A0A8C0N6S9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0T1G0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0T1U6_CANLF	UniProtKB/TrEMBL
	A0A8C0T3U2_CANLF	UniProtKB/TrEMBL
	A0A8I3Q4E7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3QBT2_CANLF	UniProtKB/TrEMBL
	A0A8I3QY89_CANLF	UniProtKB/TrEMBL
	A0A8I3S7N6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0SAS7	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:41351	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar