PDPN (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 2 | 83,552,735 - 83,581,375 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 2 | 83,552,830 - 83,581,375 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 2 | 80,087,666 - 80,116,300 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 2 | 84,202,661 - 84,231,307 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 2 | 84,201,664 - 84,231,418 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 2 | 80,955,029 - 80,983,745 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 2 | 81,973,249 - 82,001,951 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 2 | 83,039,588 - 83,068,230 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
PDPN (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 1 | 13,583,757 - 13,617,957 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 13,583,465 - 13,617,957 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 13,910,252 - 13,944,452 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 13,782,839 - 13,817,039 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 1 | 12,392,151 - 12,426,304 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | p36.21 | NCBI | | | | | HuRef | 1 | 12,427,703 - 12,461,787 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 13,708,939 - 13,743,119 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 13,025,717 - 13,059,901 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Pdpn (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 4 | 142,993,979 - 143,026,134 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 142,994,001 - 143,026,134 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 143,267,409 - 143,299,564 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 143,267,431 - 143,299,564 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 142,857,325 - 142,889,410 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 142,534,133 - 142,566,099 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 145,087,916 - 145,122,854 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | E1 | NCBI | | | | | cM Map | 4 | 77.29 | NCBI | | | | |
|
Pdpn (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 5 | 160,884,995 - 160,919,112 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 155,601,691 - 155,635,656 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 155,601,691 - 155,635,656 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 158,285,987 - 158,319,956 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 160,059,293 - 160,093,261 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 160,039,655 - 160,073,636 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 161,947,137 - 161,981,441 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 161,947,137 - 161,981,441 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 165,646,114 - 165,679,595 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 162,142,251 - 162,175,921 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 162,152,438 - 162,186,109 (-) | NCBI | | | | | Celera | 5 | 153,929,730 - 153,964,026 (-) | NCBI | | Celera | | | RH 3.4 Map | 5 | 1057.9 | RGD | | | | | Cytogenetic Map | 5 | q36 | NCBI | | | | |
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Pdpn (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955527 | 4,183,639 - 4,215,200 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
PDPN (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 1 | 213,298,624 - 213,329,916 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 212,551,117 - 212,580,726 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 12,728,569 - 12,759,781 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 13,728,233 - 13,759,584 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 13,728,233 - 13,759,584 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
Pdpn (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405058 | 35,926,390 - 35,954,229 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936474 | 1,750,944 - 1,781,156 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936474 | 1,751,159 - 1,779,011 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PDPN (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 6 | 73,019,057 - 73,049,996 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 73,019,063 - 73,050,000 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 67,223,489 - 67,254,534 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PDPN (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 20 | 118,644,060 - 118,679,508 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 118,644,051 - 118,679,311 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666054 | 22,376,384 - 22,421,943 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pdpn (Heterocephalus glaber - naked mole-rat) |
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