MYH15 (myosin heavy chain 15) - Rat Genome Database

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Gene: MYH15 (myosin heavy chain 15) Canis lupus familiaris
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Symbol: MYH15
Name: myosin heavy chain 15
RGD ID: 12093924
Description: INVOLVED IN extraocular skeletal muscle development (ortholog); ASSOCIATED WITH Coronary Disease (ortholog); Stroke (ortholog); FOUND IN cytosol (ortholog); intracellular membrane-bounded organelle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: myosin-15
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13313,620,132 - 13,758,477 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3313,620,520 - 13,758,862 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3313,721,182 - 13,875,249 (-)NCBI
ROS_Cfam_1.03313,781,218 - 13,935,290 (-)NCBI
UMICH_Zoey_3.13313,650,681 - 13,804,668 (-)NCBI
UNSW_CanFamBas_1.03313,716,572 - 13,870,812 (-)NCBI
UU_Cfam_GSD_1.03314,129,265 - 14,283,448 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
Coronary Disease  (ISO)
Stroke  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

Genomics

Comparative Map Data
MYH15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13313,620,132 - 13,758,477 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3313,620,520 - 13,758,862 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3313,721,182 - 13,875,249 (-)NCBI
ROS_Cfam_1.03313,781,218 - 13,935,290 (-)NCBI
UMICH_Zoey_3.13313,650,681 - 13,804,668 (-)NCBI
UNSW_CanFamBas_1.03313,716,572 - 13,870,812 (-)NCBI
UU_Cfam_GSD_1.03314,129,265 - 14,283,448 (-)NCBI
MYH15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl3108,380,368 - 108,529,322 (-)EnsemblGRCh38hg38GRCh38
GRCh383108,380,368 - 108,549,462 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh373108,099,215 - 108,248,169 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363109,581,906 - 109,730,859 (-)NCBINCBI36hg18NCBI36
Celera3106,495,842 - 106,644,781 (-)NCBI
Cytogenetic Map3q13.13NCBI
HuRef3105,472,505 - 105,621,389 (-)NCBIHuRef
CHM1_13108,063,378 - 108,212,288 (-)NCBICHM1_1
Myh15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391648,877,763 - 49,019,926 (+)NCBIGRCm39mm39
GRCm39 Ensembl1648,877,849 - 49,019,467 (+)Ensembl
GRCm381649,057,400 - 49,199,563 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1649,057,486 - 49,199,104 (+)EnsemblGRCm38mm10GRCm38
MGSCv371649,057,599 - 49,199,217 (+)NCBIGRCm37mm9NCBIm37
MGSCv361648,977,112 - 49,116,649 (+)NCBImm8
Celera1649,407,858 - 49,550,080 (+)NCBICelera
Cytogenetic Map16B5NCBI
Myh15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21151,621,924 - 51,763,037 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1151,622,413 - 51,762,971 (-)Ensembl
Rnor_6.01154,205,771 - 54,344,662 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1154,204,775 - 54,344,615 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01157,366,049 - 57,505,916 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41152,774,445 - 53,004,691 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1151,233,907 - 51,370,019 (-)NCBICelera
Cytogenetic Map11q21NCBI
Myh15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554279,259,811 - 9,400,526 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554279,257,716 - 9,400,526 (-)NCBIChiLan1.0ChiLan1.0
MYH15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13112,432,416 - 112,586,559 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3112,432,417 - 112,586,559 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v03105,498,196 - 105,635,979 (-)NCBIMhudiblu_PPA_v0panPan3
Myh15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602140,659,871 - 141,189,411 (+)NCBI
SpeTri2.0NW_0049366451,656,823 - 2,184,210 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYH15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13151,003,817 - 151,154,648 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113151,008,571 - 151,156,933 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213160,079,574 - 160,195,529 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MYH15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12272,279,080 - 72,413,029 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2272,278,723 - 72,410,847 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604194,071,081 - 94,207,400 (-)NCBIVero_WHO_p1.0
Myh15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473140,620,340 - 40,828,320 (+)NCBIHetGla_female_1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium
Low 6 2 9 1
Below cutoff 5 5 16 6 4 6 6 4 3 8 10 5

Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00000016254   ⟹   ENSCAFP00000015037
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3313,620,520 - 13,758,862 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000065815   ⟹   ENSCAFP00000052319
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3313,620,520 - 13,758,862 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000068451   ⟹   ENSCAFP00000057308
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3313,620,520 - 13,758,862 (-)Ensembl
RefSeq Acc Id: XM_038444863   ⟹   XP_038300791
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03313,781,218 - 13,935,290 (-)NCBI
RefSeq Acc Id: XM_038462316   ⟹   XP_038318244
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3313,721,182 - 13,875,249 (-)NCBI
RefSeq Acc Id: XM_038519146   ⟹   XP_038375074
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13313,650,681 - 13,804,668 (-)NCBI
RefSeq Acc Id: XM_038582731   ⟹   XP_038438659
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03314,129,265 - 14,283,448 (-)NCBI
RefSeq Acc Id: XM_038647145   ⟹   XP_038503073
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03313,716,572 - 13,870,812 (-)NCBI
Reference Sequences
RefSeq Acc Id: ENSCAFP00000057308   ⟸   ENSCAFT00000068451
RefSeq Acc Id: ENSCAFP00000015037   ⟸   ENSCAFT00000016254
RefSeq Acc Id: ENSCAFP00000052319   ⟸   ENSCAFT00000065815
RefSeq Acc Id: XP_038375074   ⟸   XM_038519146
RefSeq Acc Id: XP_038503073   ⟸   XM_038647145
RefSeq Acc Id: XP_038300791   ⟸   XM_038444863
RefSeq Acc Id: XP_038318244   ⟸   XM_038462316
RefSeq Acc Id: XP_038438659   ⟸   XM_038582731


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000010154 Ensembl
NCBI Gene MYH15 ENTREZGENE
VGNC ID VGNC:49881 ENTREZGENE