DDX31 (DEAD-box helicase 31) - Rat Genome Database

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Gene: DDX31 (DEAD-box helicase 31) Canis lupus familiaris
Analyze
Symbol: DDX31
Name: DEAD-box helicase 31
RGD ID: 12088456
Description: ENCODES a protein that exhibits ATP binding (inferred); helicase activity (inferred); hydrolase activity (inferred); INVOLVED IN ribosome biogenesis (inferred); ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog); Ehlers-Danlos syndrome classic type 1 (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (inferred); intracellular membrane-bounded organelle (inferred); nucleolus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: probable ATP-dependent RNA helicase DDX31
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1951,631,608 - 51,700,747 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl951,629,757 - 51,699,301 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha950,896,296 - 50,965,808 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0952,524,554 - 52,594,192 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl952,523,108 - 52,594,131 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1951,304,543 - 51,374,091 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0951,629,079 - 51,698,570 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0951,708,706 - 51,778,277 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
DDX31
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1951,631,608 - 51,700,747 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl951,629,757 - 51,699,301 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha950,896,296 - 50,965,808 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0952,524,554 - 52,594,192 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl952,523,108 - 52,594,131 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1951,304,543 - 51,374,091 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0951,629,079 - 51,698,570 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0951,708,706 - 51,778,277 (+)NCBIUU_Cfam_GSD_1.0
DDX31
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389132,592,997 - 132,669,983 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9132,592,997 - 132,670,401 (-)EnsemblGRCh38hg38GRCh38
GRCh379135,468,384 - 135,545,370 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369134,459,497 - 134,535,609 (-)NCBINCBI36Build 36hg18NCBI36
Build 349132,542,803 - 132,575,342NCBI
Celera9106,011,427 - 106,087,527 (-)NCBICelera
Cytogenetic Map9q34.13NCBI
HuRef9104,963,490 - 105,039,530 (-)NCBIHuRef
CHM1_19135,620,049 - 135,696,158 (-)NCBICHM1_1
T2T-CHM13v2.09144,804,196 - 144,881,203 (-)NCBIT2T-CHM13v2.0
Ddx31
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39228,730,418 - 28,795,587 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl228,730,418 - 28,795,583 (+)EnsemblGRCm39 Ensembl
GRCm38228,840,406 - 28,905,575 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl228,840,406 - 28,905,571 (+)EnsemblGRCm38mm10GRCm38
MGSCv37228,695,926 - 28,761,095 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36228,662,746 - 28,727,579 (+)NCBIMGSCv36mm8
Celera228,546,305 - 28,611,439 (+)NCBICelera
Cytogenetic Map2A3NCBI
cM Map219.38NCBI
Ddx31
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8332,570,725 - 32,635,446 (+)NCBIGRCr8
mRatBN7.2312,172,829 - 12,238,392 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl312,172,836 - 12,238,873 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx315,246,068 - 15,310,588 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0323,831,036 - 23,895,559 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0322,085,481 - 22,150,009 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.037,422,871 - 7,488,299 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl37,422,820 - 7,488,617 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0312,773,068 - 12,838,525 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.437,849,554 - 7,914,005 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.137,849,651 - 7,914,732 (+)NCBI
Celera36,952,740 - 7,017,059 (+)NCBICelera
Cytogenetic Map3p12NCBI
Ddx31
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555131,970,830 - 2,031,908 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555131,970,386 - 2,036,572 (-)NCBIChiLan1.0ChiLan1.0
DDX31
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2116,688,619 - 6,822,160 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan196,690,957 - 6,813,334 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v09103,665,553 - 103,787,705 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19132,297,226 - 132,418,713 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9132,341,965 - 132,418,713 (-)Ensemblpanpan1.1panPan2
Ddx31
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947199,353,677 - 199,412,484 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648719,123,577 - 19,179,117 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648719,123,422 - 19,179,285 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DDX31
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1272,383,595 - 272,453,979 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11272,383,585 - 272,454,395 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21306,415,843 - 306,486,509 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DDX31
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1125,468,127 - 5,545,610 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl125,468,412 - 5,549,120 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607910,034,035 - 10,170,720 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ddx31
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247603,692,548 - 3,765,645 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247603,692,248 - 3,763,887 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in DDX31
534 total Variants

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014116978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000072882   ⟹   ENSCAFP00000046931
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl951,629,757 - 51,699,301 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000080452   ⟹   ENSCAFP00000047331
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl951,629,757 - 51,699,301 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845029486   ⟹   ENSCAFP00845023164
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl952,523,108 - 52,594,131 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845029624   ⟹   ENSCAFP00845023268
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl952,523,108 - 52,594,131 (+)Ensembl
RefSeq Acc Id: XM_014116978   ⟹   XP_013972453
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1951,636,139 - 51,700,747 (+)NCBI
Dog10K_Boxer_Tasha950,900,826 - 50,965,808 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022423671   ⟹   XP_022279379
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1951,634,734 - 51,700,747 (+)NCBI
Dog10K_Boxer_Tasha950,899,787 - 50,965,808 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022423672   ⟹   XP_022279380
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1951,631,608 - 51,700,747 (+)NCBI
Dog10K_Boxer_Tasha950,896,296 - 50,965,808 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022423673   ⟹   XP_022279381
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1951,634,950 - 51,700,747 (+)NCBI
Dog10K_Boxer_Tasha950,899,787 - 50,965,808 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022423674   ⟹   XP_022279382
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1951,634,945 - 51,700,747 (+)NCBI
Dog10K_Boxer_Tasha950,899,787 - 50,965,808 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022423675   ⟹   XP_022279383
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1951,634,955 - 51,700,747 (+)NCBI
Dog10K_Boxer_Tasha950,899,787 - 50,965,808 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022423676   ⟹   XP_022279384
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1951,636,878 - 51,700,747 (+)NCBI
Dog10K_Boxer_Tasha950,901,595 - 50,965,808 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038487076   ⟹   XP_038343004
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1951,308,026 - 51,374,091 (+)NCBI
RefSeq Acc Id: XM_038487077   ⟹   XP_038343005
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1951,304,543 - 51,374,091 (+)NCBI
RefSeq Acc Id: XM_038487078   ⟹   XP_038343006
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1951,308,026 - 51,374,091 (+)NCBI
RefSeq Acc Id: XM_038487079   ⟹   XP_038343007
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1951,308,026 - 51,374,091 (+)NCBI
RefSeq Acc Id: XM_038487080   ⟹   XP_038343008
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1951,308,026 - 51,374,091 (+)NCBI
RefSeq Acc Id: XM_038487081   ⟹   XP_038343009
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1951,309,064 - 51,374,091 (+)NCBI
RefSeq Acc Id: XM_038548928   ⟹   XP_038404856
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0951,712,194 - 51,778,277 (+)NCBI
RefSeq Acc Id: XM_038548929   ⟹   XP_038404857
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0951,708,706 - 51,778,277 (+)NCBI
RefSeq Acc Id: XM_038548930   ⟹   XP_038404858
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0951,712,194 - 51,778,277 (+)NCBI
RefSeq Acc Id: XM_038548931   ⟹   XP_038404859
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0951,712,194 - 51,778,277 (+)NCBI
RefSeq Acc Id: XM_038548932   ⟹   XP_038404860
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0951,712,194 - 51,778,277 (+)NCBI
RefSeq Acc Id: XM_038548933   ⟹   XP_038404861
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0951,714,002 - 51,778,277 (+)NCBI
RefSeq Acc Id: XM_038548934   ⟹   XP_038404862
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0951,713,232 - 51,778,277 (+)NCBI
RefSeq Acc Id: XM_038612882   ⟹   XP_038468810
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0951,632,558 - 51,698,570 (+)NCBI
RefSeq Acc Id: XM_038612883   ⟹   XP_038468811
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0951,629,079 - 51,698,570 (+)NCBI
RefSeq Acc Id: XM_038612884   ⟹   XP_038468812
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0951,632,558 - 51,698,570 (+)NCBI
RefSeq Acc Id: XM_038612885   ⟹   XP_038468813
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0951,632,558 - 51,698,570 (+)NCBI
RefSeq Acc Id: XM_038612886   ⟹   XP_038468814
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0951,632,558 - 51,698,570 (+)NCBI
RefSeq Acc Id: XM_038612887   ⟹   XP_038468815
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0951,634,366 - 51,698,570 (+)NCBI
RefSeq Acc Id: XM_038612888   ⟹   XP_038468816
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0951,633,596 - 51,698,570 (+)NCBI
RefSeq Acc Id: XM_038678185   ⟹   XP_038534113
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0952,528,045 - 52,594,192 (+)NCBI
RefSeq Acc Id: XM_038678186   ⟹   XP_038534114
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0952,524,554 - 52,594,192 (+)NCBI
RefSeq Acc Id: XM_038678187   ⟹   XP_038534115
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0952,528,045 - 52,594,192 (+)NCBI
RefSeq Acc Id: XM_038678188   ⟹   XP_038534116
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0952,528,045 - 52,594,192 (+)NCBI
RefSeq Acc Id: XM_038678189   ⟹   XP_038534117
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0952,528,045 - 52,594,192 (+)NCBI
RefSeq Acc Id: XM_038678190   ⟹   XP_038534118
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0952,529,853 - 52,594,192 (+)NCBI
RefSeq Acc Id: XM_038678191   ⟹   XP_038534119
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0952,529,084 - 52,594,192 (+)NCBI
Protein Sequences
Protein RefSeqs XP_013972453 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279379 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279380 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279381 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279382 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279383 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279384 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343004 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343005 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343006 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343007 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343008 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343009 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404856 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404857 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404858 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404859 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404860 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404861 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404862 (Get FASTA)   NCBI Sequence Viewer  
  XP_038468810 (Get FASTA)   NCBI Sequence Viewer  
  XP_038468811 (Get FASTA)   NCBI Sequence Viewer  
  XP_038468812 (Get FASTA)   NCBI Sequence Viewer  
  XP_038468813 (Get FASTA)   NCBI Sequence Viewer  
  XP_038468814 (Get FASTA)   NCBI Sequence Viewer  
  XP_038468815 (Get FASTA)   NCBI Sequence Viewer  
  XP_038468816 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534113 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534114 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534115 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534116 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534117 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534118 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534119 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000046931.2
  ENSCAFP00000047331.2
  ENSCAFP00040004942.1
  ENSCAFP00845023164.1
  ENSCAFP00845023268.1
RefSeq Acc Id: XP_013972453   ⟸   XM_014116978
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_022279380   ⟸   XM_022423672
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PVU3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022279379   ⟸   XM_022423671
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PVU3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022279382   ⟸   XM_022423674
- Peptide Label: isoform X4
- UniProtKB: A0A8C0PVU3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022279381   ⟸   XM_022423673
- Peptide Label: isoform X3
- UniProtKB: A0A8C0PVU3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022279383   ⟸   XM_022423675
- Peptide Label: isoform X5
- UniProtKB: A0A8C0PVU3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022279384   ⟸   XM_022423676
- Peptide Label: isoform X6
- UniProtKB: A0A8C0LGF3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000047331   ⟸   ENSCAFT00000080452
RefSeq Acc Id: ENSCAFP00000046931   ⟸   ENSCAFT00000072882
RefSeq Acc Id: XP_038343005   ⟸   XM_038487077
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038343004   ⟸   XM_038487076
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038343006   ⟸   XM_038487078
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038343008   ⟸   XM_038487080
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038343007   ⟸   XM_038487079
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038343009   ⟸   XM_038487081
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038468811   ⟸   XM_038612883
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038468810   ⟸   XM_038612882
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038468812   ⟸   XM_038612884
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038468814   ⟸   XM_038612886
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038468813   ⟸   XM_038612885
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038468816   ⟸   XM_038612888
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038468815   ⟸   XM_038612887
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038534114   ⟸   XM_038678186
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PVU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038534113   ⟸   XM_038678185
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PVU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038534115   ⟸   XM_038678187
- Peptide Label: isoform X3
- UniProtKB: A0A8C0PVU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038534117   ⟸   XM_038678189
- Peptide Label: isoform X5
- UniProtKB: A0A8C0PVU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038534116   ⟸   XM_038678188
- Peptide Label: isoform X4
- UniProtKB: A0A8C0PVU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038534119   ⟸   XM_038678191
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038534118   ⟸   XM_038678190
- Peptide Label: isoform X6
- UniProtKB: A0A8C0LGF3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038404857   ⟸   XM_038548929
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PVU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038404856   ⟸   XM_038548928
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PVU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038404858   ⟸   XM_038548930
- Peptide Label: isoform X3
- UniProtKB: A0A8C0PVU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038404860   ⟸   XM_038548932
- Peptide Label: isoform X5
- UniProtKB: A0A8C0PVU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038404859   ⟸   XM_038548931
- Peptide Label: isoform X4
- UniProtKB: A0A8C0PVU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038404862   ⟸   XM_038548934
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038404861   ⟸   XM_038548933
- Peptide Label: isoform X6
- UniProtKB: A0A8C0LGF3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845023164   ⟸   ENSCAFT00845029486
RefSeq Acc Id: ENSCAFP00845023268   ⟸   ENSCAFT00845029624

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000049076 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00040003018 UniProtKB/TrEMBL
  ENSCAFG00845016626 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000072882.2 UniProtKB/TrEMBL
  ENSCAFT00000080452.2 UniProtKB/TrEMBL
  ENSCAFT00040005741.1 UniProtKB/TrEMBL
  ENSCAFT00845029486.1 UniProtKB/TrEMBL
  ENSCAFT00845029624.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
InterPro DEAD/DEAH_box_helicase_dom UniProtKB/TrEMBL
  DUF4217 UniProtKB/TrEMBL
  Helicase_ATP-bd UniProtKB/TrEMBL
  Helicase_C UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  RNA-helicase_DEAD-box_CS UniProtKB/TrEMBL
  RNA_helicase_DEAD_Q_motif UniProtKB/TrEMBL
NCBI Gene DDX31 ENTREZGENE
PANTHER ATP-DEPENDENT RNA HELICASE DDX31-RELATED UniProtKB/TrEMBL
  RNA HELICASE UniProtKB/TrEMBL
Pfam DEAD UniProtKB/TrEMBL
  DUF4217 UniProtKB/TrEMBL
  Helicase_C UniProtKB/TrEMBL
PROSITE DEAD_ATP_HELICASE UniProtKB/TrEMBL
  HELICASE_ATP_BIND_1 UniProtKB/TrEMBL
  HELICASE_CTER UniProtKB/TrEMBL
  Q_MOTIF UniProtKB/TrEMBL
SMART DEXDc UniProtKB/TrEMBL
  DUF4217 UniProtKB/TrEMBL
  HELICc UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A8C0LGF3 ENTREZGENE
  A0A8C0PVU3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3P2R9_CANLF UniProtKB/TrEMBL
  A0A8I3P5H1_CANLF UniProtKB/TrEMBL
  A0A8P0NXE2_CANLF UniProtKB/TrEMBL
  A0A8P0SZW7_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:111431 ENTREZGENE