SLC22A7 (solute carrier family 22 member 7) - Rat Genome Database

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Gene: SLC22A7 (solute carrier family 22 member 7) Canis lupus familiaris
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Symbol: SLC22A7
Name: solute carrier family 22 member 7
RGD ID: 12086867
Description: ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); organic anion transmembrane transporter activity (ortholog); prostaglandin transmembrane transporter activity (ortholog); INVOLVED IN alpha-ketoglutarate transport (ortholog); organic anion transport (ortholog); prostaglandin transport (ortholog); PARTICIPATES IN multispecific organic anion transporter mediated transport pathway; ASSOCIATED WITH Drug-Related Side Effects and Adverse Reactions (ortholog); genetic disease (ortholog); infantile Refsum disease (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: solute carrier family 22 (organic anion transporter), member 7
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11211,781,623 - 11,788,256 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1211,808,639 - 11,814,376 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01212,265,706 - 12,271,443 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11211,791,445 - 11,797,183 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01211,875,644 - 11,881,384 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01211,970,737 - 11,976,476 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
SLC22A7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11211,781,623 - 11,788,256 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1211,808,639 - 11,814,376 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01212,265,706 - 12,271,443 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11211,791,445 - 11,797,183 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01211,875,644 - 11,881,384 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01211,970,737 - 11,976,476 (+)NCBIUU_Cfam_GSD_1.0
SLC22A7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38643,295,714 - 43,305,538 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl643,295,694 - 43,305,538 (+)EnsemblGRCh38hg38GRCh38
GRCh37643,265,998 - 43,273,276 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36643,373,976 - 43,381,254 (+)NCBINCBI36Build 36hg18NCBI36
Build 34643,373,979 - 43,381,252NCBI
Celera644,817,758 - 44,825,036 (+)NCBICelera
Cytogenetic Map6p21.1NCBI
HuRef642,984,503 - 42,991,781 (+)NCBIHuRef
CHM1_1643,268,944 - 43,276,222 (+)NCBICHM1_1
T2T-CHM13v2.0643,127,200 - 43,134,478 (+)NCBIT2T-CHM13v2.0
Slc22a7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391746,743,111 - 46,749,403 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1746,743,109 - 46,749,383 (-)EnsemblGRCm39 Ensembl
GRCm381746,432,185 - 46,438,477 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1746,432,183 - 46,438,457 (-)EnsemblGRCm38mm10GRCm38
MGSCv371746,569,134 - 46,575,426 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361745,895,372 - 45,901,620 (-)NCBIMGSCv36mm8
Celera1749,867,036 - 49,874,196 (-)NCBICelera
Cytogenetic Map17CNCBI
cM Map1722.9NCBI
Slc22a7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8922,044,672 - 22,052,051 (+)NCBIGRCr8
mRatBN7.2914,547,073 - 14,554,354 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl914,547,849 - 14,553,921 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx923,131,122 - 23,136,904 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0928,194,555 - 28,200,325 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0926,494,501 - 26,500,283 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0916,925,321 - 16,931,119 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl916,924,520 - 16,931,766 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0915,822,368 - 15,828,166 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.499,934,309 - 9,940,107 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.199,931,570 - 9,937,643 (+)NCBI
Celera912,295,095 - 12,300,893 (+)NCBICelera
Cytogenetic Map9q12NCBI
Slc22a7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554379,204,322 - 9,210,086 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554379,204,414 - 9,210,350 (+)NCBIChiLan1.0ChiLan1.0
SLC22A7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2557,798,445 - 57,805,672 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1653,668,286 - 53,675,511 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0642,888,110 - 42,897,556 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1644,182,287 - 44,189,567 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl644,182,288 - 44,189,097 (+)Ensemblpanpan1.1panPan2
Slc22a7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494647,279,993 - 47,284,825 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647616,675,026 - 16,680,209 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647616,675,377 - 16,680,209 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC22A7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl738,328,419 - 38,334,878 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1738,328,474 - 38,334,879 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2743,828,928 - 43,834,428 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC22A7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11728,848,115 - 28,856,298 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1728,846,791 - 28,855,355 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604443,359,183 - 43,366,555 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc22a7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475416,276,437 - 16,281,741 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475416,275,689 - 16,282,141 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SLC22A7
62 total Variants

Expression


Sequence


RefSeq Acc Id: XM_022426070   ⟹   XP_022281778
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11211,781,623 - 11,788,256 (+)NCBI
Dog10K_Boxer_Tasha1211,808,639 - 11,814,376 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038492763   ⟹   XP_038348691
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11211,791,445 - 11,797,183 (+)NCBI
RefSeq Acc Id: XM_038553331   ⟹   XP_038409259
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01211,970,737 - 11,976,476 (+)NCBI
RefSeq Acc Id: XM_038617225   ⟹   XP_038473153
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01211,875,644 - 11,881,384 (+)NCBI
RefSeq Acc Id: XM_038682792   ⟹   XP_038538720
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01212,265,706 - 12,271,443 (+)NCBI
RefSeq Acc Id: XP_022281778   ⟸   XM_022426070
- Sequence:
RefSeq Acc Id: XP_038348691   ⟸   XM_038492763
RefSeq Acc Id: XP_038473153   ⟸   XM_038617225
RefSeq Acc Id: XP_038538720   ⟸   XM_038682792
RefSeq Acc Id: XP_038409259   ⟸   XM_038553331


Additional Information

Database Acc Id Source(s)
NCBI Gene SLC22A7 ENTREZGENE
VGNC ID VGNC:57234 ENTREZGENE