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Gene: SLC1A3 (solute carrier family 1 member 3) Canis lupus familiaris

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Symbol:

SLC1A3

Name:

solute carrier family 1 member 3

RGD ID:

12084441

Description:

ENCODES a protein that exhibits high-affinity L-glutamate transmembrane transporter activity (ortholog); L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN L-glutamate transmembrane transport (ortholog); malate-aspartate shuttle (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); Cornelia de Lange syndrome 1 (ortholog); COVID-19 (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); dendritic spine (ortholog)

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

excitatory amino acid transporter 1; GLAST; Na+-dependent glutamate transporter

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	71,936,128 - 72,014,119 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	71,936,126 - 72,014,173 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	71,545,756 - 71,624,038 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	72,446,075 - 72,524,440 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	72,445,714 - 72,524,563 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	72,192,176 - 72,270,091 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	72,315,043 - 72,393,341 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	72,846,428 - 72,924,441 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

Cornelia de Lange syndrome 1 (ISO)

COVID-19 (ISO)

Developmental Disabilities (ISO)

epilepsy (ISO)

episodic ataxia (ISO)

episodic ataxia type 6 (ISO)

Experimental Diabetes Mellitus (ISO)

genetic disease (ISO)

low tension glaucoma (ISO)

Neurodevelopmental Disorders (ISO)

spastic ataxia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

amino acid transport (IEA)

auditory behavior (IEA)

cell morphogenesis involved in neuron differentiation (IEA)

cellular response to cocaine (IEA)

chloride transmembrane transport (IEA)

cranial nerve development (IEA)

D-aspartate import across plasma membrane (IBA,IEA)

gamma-aminobutyric acid biosynthetic process (IEA)

intracellular sodium ion homeostasis (IEA)

L-alpha-amino acid transmembrane transport (IEA)

L-aspartate import across plasma membrane (IBA,IEA)

L-glutamate import (IEA)

L-glutamate import across plasma membrane (IBA,IEA)

L-glutamate transmembrane transport (IEA,ISO)

malate-aspartate shuttle (ISO)

neuromuscular process controlling balance (IEA)

neutral amino acid transport (IEA)

positive regulation of synaptic transmission (IEA)

potassium ion transmembrane transport (IEA)

response to antibiotic (IEA)

response to light stimulus (IEA)

response to wounding (IEA)

response to xenobiotic stimulus (IEA)

sensory perception of sound (IEA)

Cellular Component

basal plasma membrane (ISO)

basolateral plasma membrane (ISO)

cell periphery (IEA)

cell projection (IEA)

cell surface (IEA)

dendritic spine (ISO)

membrane (IEA)

membrane protein complex (ISO)

mitochondrial inner membrane (ISO)

neuron projection (IEA)

neuronal cell body (IEA)

plasma membrane (IBA,IEA)

synapse (IEA)

Molecular Function

acidic amino acid transmembrane transporter activity (IEA)

amino acid binding (IEA)

glutamate binding (IEA)

glutamate:sodium symporter activity (IBA,IEA)

high-affinity L-glutamate transmembrane transporter activity (IEA,ISO)

L-glutamate transmembrane transporter activity (IBA,IEA,ISO)

metal ion binding (IEA)

neutral L-amino acid transmembrane transporter activity (IBA)

protein binding (ISO)

symporter activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

nicotinamide adenine dinucleotide metabolic pathway (ISO)

References

Additional References at PubMed

PMID:10692470	PMID:23200831	PMID:30032202

Genomics

Comparative Map Data

SLC1A3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	71,936,128 - 72,014,119 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	71,936,126 - 72,014,173 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	71,545,756 - 71,624,038 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	72,446,075 - 72,524,440 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	72,445,714 - 72,524,563 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	72,192,176 - 72,270,091 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	72,315,043 - 72,393,341 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	72,846,428 - 72,924,441 (-)	NCBI		UU_Cfam_GSD_1.0

SLC1A3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	36,606,606 - 36,688,334 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	36,596,588 - 36,688,334 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	36,606,708 - 36,688,436 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	36,642,446 - 36,724,191 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	36,642,447 - 36,724,197	NCBI
Celera	5	36,493,385 - 36,575,353 (+)	NCBI		Celera
Cytogenetic Map	5	p13.2	NCBI
HuRef	5	36,559,517 - 36,641,481 (+)	NCBI		HuRef
CHM1_1	5	36,609,230 - 36,691,155 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	36,856,459 - 36,938,148 (+)	NCBI		T2T-CHM13v2.0

Slc1a3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	8,663,608 - 8,742,648 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	8,663,608 - 8,740,248 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	8,634,124 - 8,710,807 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	8,634,124 - 8,710,764 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	8,584,124 - 8,660,807 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	8,581,339 - 8,657,945 (-)	NCBI		MGSCv36	mm8
Celera	15	8,479,667 - 8,556,633 (-)	NCBI		Celera
Cytogenetic Map	15	A1	NCBI
cM Map	15	3.82	NCBI

Slc1a3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	59,482,707 - 59,557,808 (-)	NCBI		GRCr8
mRatBN7.2	2	57,755,495 - 57,830,605 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	57,755,497 - 57,830,605 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	64,851,543 - 64,926,640 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	62,946,162 - 63,021,300 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	57,947,345 - 58,022,485 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	57,860,881 - 57,935,363 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	57,860,834 - 57,935,363 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	79,348,443 - 79,422,645 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	58,270,236 - 58,347,613 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	58,198,470 - 58,275,846 (-)	NCBI
Celera	2	53,367,866 - 53,442,429 (-)	NCBI		Celera
Cytogenetic Map	2	q16	NCBI

Slc1a3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955426	21,371,985 - 21,451,069 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955426	21,371,985 - 21,450,749 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC1A3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	73,645,238 - 73,727,200 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	71,798,870 - 71,880,587 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	73,679,841 - 73,761,591 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	78,960,797 - 79,042,694 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	78,960,797 - 79,042,694 (-)	Ensembl	panpan1.1		panPan2

Slc1a3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	226,079,921 - 226,156,414 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936518	5,215,290 - 5,291,058 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936518	5,216,343 - 5,291,107 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC1A3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	21,873,691 - 21,964,990 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	21,873,691 - 21,965,315 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	22,924,641 - 23,007,781 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC1A3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	35,473,425 - 35,557,118 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	35,473,658 - 35,557,138 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666071	25,803,256 - 25,886,938 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc1a3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624759	18,325,147 - 18,400,431 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624759	18,325,272 - 18,400,447 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SLC1A3
821 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001003136	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF067847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000029693 ⟹ ENSCAFP00000027598

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	4	71,936,126 - 72,014,119 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000066330 ⟹ ENSCAFP00000045368

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	4	71,936,126 - 72,014,119 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000072569 ⟹ ENSCAFP00000056323

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	4	71,938,155 - 72,014,119 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000074022 ⟹ ENSCAFP00000049487

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	4	71,936,126 - 72,012,317 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000084733 ⟹ ENSCAFP00000053774

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	4	71,938,155 - 72,014,173 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845007593 ⟹ ENSCAFP00845005998

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	72,445,714 - 72,524,517 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845007600 ⟹ ENSCAFP00845006005

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	72,445,714 - 72,524,517 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845007604 ⟹ ENSCAFP00845006009

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	72,445,714 - 72,522,638 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845007618 ⟹ ENSCAFP00845006022

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	72,446,076 - 72,524,523 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845007632 ⟹ ENSCAFP00845006032

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	72,447,144 - 72,524,563 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845007647 ⟹ ENSCAFP00845006047

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	72,447,727 - 72,524,517 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845007649 ⟹ ENSCAFP00845006049

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	72,448,101 - 72,524,521 (-)	Ensembl

RefSeq Acc Id:

NM_001003136 ⟹ NP_001003136

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	71,936,128 - 72,014,119 (-)	NCBI
Dog10K_Boxer_Tasha	4	71,545,756 - 71,624,038 (-)	NCBI
ROS_Cfam_1.0	4	72,446,075 - 72,524,440 (-)	NCBI
UMICH_Zoey_3.1	4	72,192,176 - 72,270,091 (-)	NCBI
UNSW_CanFamBas_1.0	4	72,315,043 - 72,393,341 (-)	NCBI
UU_Cfam_GSD_1.0	4	72,846,428 - 72,924,441 (-)	NCBI

Sequence:

show sequence

CCCGAACACCCGGGCACAGTCGGCGAAGTTGTGTTCTCTAACACCAAAGACATCTGGCTTTCCG
GGGGTGATTCCGAGACATTGAAGTGCAAAGAAGAGACTCTCCTAGAGAAATAAAATATGACTAA
AAGTAATGAAGAAGAGCCCAGGACAGGGGGCAGGATGGAGAGGTTCCAGCGAGGAGTTCGTAAG
CGCACACTCTTGGCCAAGAGGAAGGTGCAGAACATCACAAAGGAGGATGTTAAAAGTTACCTAT
TTCGGAATGCTTTCGTGCTGCTCACTGTCACTGCAGTCATTGTGGGTACAATCCTTGGATTTAC
CCTGCGACCATACAGAATGAGCTACCGGGAGGTCAAGTACTTCTCTTTTCCTGGGGAACTCCTG
ATGAGGATGTTACAGATGCTGGTGTTACCACTTATCATCTCCAGTCTTGTCACAGGGATGGCGG
CCCTAGATAGTAAGGCATCAGGGAAGATGGGAATGCGAGCGGTAGTCTATTACATGACTACGAC
CATCATTGCCGTGGTGATTGGCATAATCATTGTCATCATCATCCATCCCGGGAAGGGCACAAAG
GAAAACATGCACAGAGAAGGCAAAATTGTACAAGTGACAGCTGCAGACGCCTTCCTGGACTTGA
TCAGGAATATGTTCCCTCCAAATCTGGTGGAAGCTTGCTTTAAACAGTTTAAAACCAACTATGA
GAAGAGAAGCTTTAAAGTGCCCATCCAGTCCAATGAGACGCTCATGGCTGCCGTGATAAACAAT
GTGTCGGAAGCCATGGAGACTCTTACAAGGATCACGGAGGAGTTGATCCCAGTTCCAGGGTCTG
TGAATGGGGTCAATGCCCTGGGACTAGTTGTCTTCTCCATGTGCTTTGGACTTGTGATTGGAAA
CATGAAAGAGCAAGGGCAAGCCTTGAGAGAATTCTTTGATTCTCTTAATGAAGCCATCATGAGA
TTGGTAGCAGTGATAATGTGGTACGCCCCTCTGGGCATCCTCTTCCTGATTGCAGGGAAAATTG
TTGAGATGGAAGACATGGGAGTGATTGGGGGGCAGCTTGCCATGTACACAGTGACAGTCATTGT
CGGCCTGCTCATTCACGCGGTCATCGTCCTGCCCCTCCTCTACTTCTTGGTAACACGGAAAAAC
CCTTGGGTTTTTATCGGAGGGTTGCTGCAAGCACTCATCACAGCTCTCGGAACCTCCTCCAGTT
CTGCTACCCTACCCATCACATTCAAGTGCTTGGAAGAGAACAATGGCGTGGACAAACGTGTCAC
CAGATTCGTGCTCCCAGTGGGTGCCACCATTAACATGGATGGGACCGCACTCTATGAGGCTTTG
GCTGCCATTTTCATCGCTCAAGTTAACAATTTTGAACTGAACTTTGGACAGATTATTACGATCA
GCATCACAGCCACAGCTGCCAGTATTGGAGCAGCTGGGATTCCTCAGGCTGGCCTGGTCACCAT
GGTCATTGTGCTGACGTCTGTGGGCCTACCCACCGATGACATCACGCTCATTATCGCCGTGGAC
TGGTTCCTGGACCGCCTCCGCACCACCACCAACGTGCTGGGAGACTCCCTCGGAGCCGGCATCG
TGGAGCACTTGTCCCGACACGAACTGAAGAACCGGGACATCGAGATGGGTAATTCCGTGATCGA
AGAGAATGAAATGAAGAAACCCTATCAGCTGATTGCCCAGGAAAGCGAGACTGAGAAACCCACT
GACAGTGAAACCAAGATGTAGACTAGCACCAGAACGGTTTTCTGGAGCAGCAGGTGTTCGCAAA
CCACTGTAAAATGTTTCCAGCTGTTACAACTCATTCTCTCCGGGAAGCCCCTTACCTCCCTTTT
CCTGTACTCTGATAGGATTGGGAAGTAATCGTCCAAAACCAAGGGGGGATTTTGCGAGTCAGAT
CAGATCTTGCGAGTTTACGTGGCACACAGAACTGCAAATGTGATTTTTTTTTTTTAATAAGCTG
AAGAGTCAAACGAATAGTAGGCTTAAAGCATGCTTTTAAATCAACTTTCAAAATTTAAAAATCC
TTCAGAATGCAATTCAGTTTTAGTATCAAAACAACTTGATAAACTACAATCAGTTATCAATGGA
AGAGTAGAAGGGTTTTTTTCCCCCGTCTCTCTTCTGATTTGTGTCCTGATACAAATACTAGCAG
GCCACTATGAATACACACCTAGCACAGCTGTGAGGAGCCACATAAAGTGAAATTTCCAAGTGGC
CAGAGGCAACTTAATCTCATTTCTAGGCCTCAGTGTTCTCATCTGTAAAATGGGTGAGTTCCCT
GGATGCCTTTATGGTCTCTTCTAGCCCAAACATCCTGTGACACCATAGAAGAGCCTGCCTTCTA
TTCCCCCTTGGAACATCCTGTAGCAAGTATCATTCATGGGACTTTCAAAAAGGATACTTACTGG
GAATGAACTTTTCTAAGTAGGGGAGGGATGGCTGTATGGTTTACCAGGTCCTGTGTCCAATGTC
AGTTATGCGAGTCACCAAGCTGGAGGCCATTCAAGGAGTGGAATTATTCATGAAACTCTGCTGA
GTTCTTCCCAATGAGGGGAAAGTATTCCCTTCTTTCCTGCCCTTCCCAAACGGAAGGGACTGCT
CTGGGAAGGATTCTCCCACCACTCCTCAACTGACCATAGACTTTTAGAAAGTAAAATGTAAGAC
TAGCAACTAGCAAGGGTGCTCATAGTCTTACTACAGAACACTAAAGAGCCAGGTAGGAAAGAGT
GGAGCATGGTTGACATTATGGAGAGGATTTTTAAAACACCACGCTTATAGATCATCTTTAAGGA
CGAATTTAAAATAGAGAGGTTCATTTTGTTTAACCTGAAATACTTTTTGTCTTCAGTTCAAAAT
CATCCCCCAAGGAAGTCTGCTTATCAAAATACAAGGTCACTTCTCATATCTATTTTGAAGAAGT
CAAATGAATGAGCTCTCTCTCCCTCTCTCTCTCAATAGAGGTCCAGGAGCTGGGTGGGTGGTCT
CTTATTTGAAAAGGTTTTTGACTATAATCAAAAGTTCTTAGGATGAGAGAAACAAGATATTTCT
TTGTGTTGGAATTCCACTTCCCAAATCATTGAAAGCCTTTAGCTGGAATTGGGTTCAGTTTTAT
TTTGTTTGTGTCCCTGAGAGAAATGGTAGAAGATGAATCAGTATAGAGACGCTGTCAATGTGGT
TCCAAGAGAAAACCAGCAGGGGCATTAGTTTCAGGCGAGGCAGCTCCCAGGTTTAGAGGAGATT
AATTTTTTTACCCCCTAAGGAGTATTCACTCAAAGACATGGACTGGGAGCTGTCAGTACCAGCT
GTGCTTGAGTTTCTGACCGAAAATGGTGAAGAATGGACTTAATTATGCTAACAGATTGAAAATC
TAGACATACACTCTCCAATACACAATTAGAGACGTTTTCTATATAGATCATGAGCGTTACATGT
GTACAAAAAAAAGTTAACGTTAGGCTGTGGTGAAGTAACCGTTTAATGCCGAGGCTCTATTTGG
GAAATACATTACAAAAGTTAATATCCGTGGCTGTCATCTCATGACACCAGTAGAGCAAAAATTA
ATCACGTCAAATTAATTCTGTTATACAGTGTGATCTTTTTTTTTTATACTAACCATTTCTTATG
GAAAGCAAGTCCTCTTGGACGATCCTCTCTCCAGCCCATCACAGGCTCTGTATACGCATGCACC
CAGTGTGGACTGAGAAGCATTACTTTGTAGATGTATTTTCAATAAAGAAAAGAAATTAGTTTTA
CACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001003136	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD45401	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000027598.4
	ENSCAFP00000045368.1
	ENSCAFP00000049487.1
	ENSCAFP00000053774.2
	ENSCAFP00000056323.1
	ENSCAFP00000072838.1
	ENSCAFP00000073806.1
	ENSCAFP00030002686.1
	ENSCAFP00030002712.1
	ENSCAFP00030002726.1
	ENSCAFP00030002745.1
	ENSCAFP00040013318.1
	ENSCAFP00040013343.1
	ENSCAFP00040013359.1
	ENSCAFP00040013378.1
	ENSCAFP00040013391.1
	ENSCAFP00845005998
	ENSCAFP00845005998.1
	ENSCAFP00845006005.1
	ENSCAFP00845006009.1
	ENSCAFP00845006022.1
	ENSCAFP00845006032.1
	ENSCAFP00845006047.1
	ENSCAFP00845006049.1

RefSeq Acc Id:

NP_001003136 ⟸ NM_001003136

- UniProtKB:

Q9N280 (UniProtKB/TrEMBL), A0A8C0QPQ6 (UniProtKB/TrEMBL), F1PTY7 (UniProtKB/TrEMBL), A0A8I3MSE2 (UniProtKB/TrEMBL), A0A8P0P3D3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTKSNEEEPRTGGRMERFQRGVRKRTLLAKRKVQNITKEDVKSYLFRNAFVLLTVTAVIVGTIL
GFTLRPYRMSYREVKYFSFPGELLMRMLQMLVLPLIISSLVTGMAALDSKASGKMGMRAVVYYM
TTTIIAVVIGIIIVIIIHPGKGTKENMHREGKIVQVTAADAFLDLIRNMFPPNLVEACFKQFKT
NYEKRSFKVPIQSNETLMAAVINNVSEAMETLTRITEELIPVPGSVNGVNALGLVVFSMCFGLV
IGNMKEQGQALREFFDSLNEAIMRLVAVIMWYAPLGILFLIAGKIVEMEDMGVIGGQLAMYTVT
VIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALITALGTSSSSATLPITFKCLEENNGVDK
RVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFELNFGQIITISITATAASIGAAGIPQAGL
VTMVIVLTSVGLPTDDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRHELKNRDIEMGNS
VIEENEMKKPYQLIAQESETEKPTDSETKM

hide sequence

Ensembl Acc Id:

ENSCAFP00000027598 ⟸ ENSCAFT00000029693

Ensembl Acc Id:

ENSCAFP00000049487 ⟸ ENSCAFT00000074022

Ensembl Acc Id:

ENSCAFP00000053774 ⟸ ENSCAFT00000084733

Ensembl Acc Id:

ENSCAFP00000045368 ⟸ ENSCAFT00000066330

Ensembl Acc Id:

ENSCAFP00000056323 ⟸ ENSCAFT00000072569

Ensembl Acc Id:

ENSCAFP00845005998 ⟸ ENSCAFT00845007593

Ensembl Acc Id:

ENSCAFP00845006009 ⟸ ENSCAFT00845007604

Ensembl Acc Id:

ENSCAFP00845006049 ⟸ ENSCAFT00845007649

Ensembl Acc Id:

ENSCAFP00845006005 ⟸ ENSCAFT00845007600

Ensembl Acc Id:

ENSCAFP00845006032 ⟸ ENSCAFT00845007632

Ensembl Acc Id:

ENSCAFP00845006022 ⟸ ENSCAFT00845007618

Ensembl Acc Id:

ENSCAFP00845006047 ⟸ ENSCAFT00845007647

Promoters

RGD ID:

13683057

Promoter ID:

EPDNEW_C1127

Type:

single initiation site

Name:

SLC1A3_1

Description:

solute carrier family 1 member 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	72,014,194 - 72,014,254	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000018704	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030001680	UniProtKB/TrEMBL
	ENSCAFG00040008146	UniProtKB/TrEMBL
	ENSCAFG00845004230	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000029693.5	UniProtKB/TrEMBL
	ENSCAFT00000066330.2	UniProtKB/TrEMBL
	ENSCAFT00000072569.2	UniProtKB/TrEMBL
	ENSCAFT00000074022.2	UniProtKB/TrEMBL
	ENSCAFT00000084733.2	UniProtKB/TrEMBL
	ENSCAFT00000097026.1	UniProtKB/TrEMBL
	ENSCAFT00000109096.1	UniProtKB/TrEMBL
	ENSCAFT00030003024.1	UniProtKB/TrEMBL
	ENSCAFT00030003058.1	UniProtKB/TrEMBL
	ENSCAFT00030003073.1	UniProtKB/TrEMBL
	ENSCAFT00030003092.1	UniProtKB/TrEMBL
	ENSCAFT00040015368.1	UniProtKB/TrEMBL
	ENSCAFT00040015397.1	UniProtKB/TrEMBL
	ENSCAFT00040015413.1	UniProtKB/TrEMBL
	ENSCAFT00040015433.1	UniProtKB/TrEMBL
	ENSCAFT00040015448.1	UniProtKB/TrEMBL
	ENSCAFT00845007593	ENTREZGENE
	ENSCAFT00845007593.1	UniProtKB/TrEMBL
	ENSCAFT00845007600.1	UniProtKB/TrEMBL
	ENSCAFT00845007604.1	UniProtKB/TrEMBL
	ENSCAFT00845007618.1	UniProtKB/TrEMBL
	ENSCAFT00845007632.1	UniProtKB/TrEMBL
	ENSCAFT00845007647.1	UniProtKB/TrEMBL
	ENSCAFT00845007649.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.3860.10	UniProtKB/TrEMBL
InterPro	DAACS	UniProtKB/TrEMBL
	Na-dicarboxylate_symporter	UniProtKB/TrEMBL
	Na-dicarboxylate_symporter_CS	UniProtKB/TrEMBL
	Na:dicarbo_symporter_sf	UniProtKB/TrEMBL
KEGG Report	cfa:403748	UniProtKB/TrEMBL
NCBI Gene	SLC1A3	ENTREZGENE
PANTHER	EXCITATORY AMINO ACID TRANSPORTER 1	UniProtKB/TrEMBL
	SODIUM/DICARBOXYLATE SYMPORTER-RELATED	UniProtKB/TrEMBL
Pfam	SDF	UniProtKB/TrEMBL
PRINTS	EDTRNSPORT	UniProtKB/TrEMBL
PROSITE	NA_DICARBOXYL_SYMP_1	UniProtKB/TrEMBL
	NA_DICARBOXYL_SYMP_2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF118215	UniProtKB/TrEMBL
UniProt	A0A8C0LWI3_CANLF	UniProtKB/TrEMBL
	A0A8C0M1F1_CANLF	UniProtKB/TrEMBL
	A0A8C0QHQ4_CANLF	UniProtKB/TrEMBL
	A0A8C0QLM7_CANLF	UniProtKB/TrEMBL
	A0A8C0QPQ6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MKD8_CANLF	UniProtKB/TrEMBL
	A0A8I3MM98_CANLF	UniProtKB/TrEMBL
	A0A8I3MRQ1_CANLF	UniProtKB/TrEMBL
	A0A8I3MSE2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MU35_CANLF	UniProtKB/TrEMBL
	A0A8I3MVY9_CANLF	UniProtKB/TrEMBL
	A0A8P0P3D3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0SMQ2_CANLF	UniProtKB/TrEMBL
	F1PTY7	ENTREZGENE
	Q9N280	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	F1PTY7	UniProtKB/TrEMBL
VGNC ID	VGNC:46263	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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