MLH3 (mutL homolog 3) - Rat Genome Database

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Gene: MLH3 (mutL homolog 3) Canis lupus familiaris
Analyze
Symbol: MLH3
Name: mutL homolog 3
RGD ID: 12076576
Description: ENCODES a protein that exhibits ATP binding (inferred); ATP hydrolysis activity (inferred); ATP-dependent DNA damage sensor activity (inferred); INVOLVED IN DNA damage response (ortholog); female meiosis I (ortholog); male meiotic nuclear division (ortholog); PARTICIPATES IN mismatch repair pathway; ASSOCIATED WITH breast cancer (ortholog); breast carcinoma (ortholog); colon carcinoma (ortholog); FOUND IN chiasma (inferred); condensed chromosome (inferred); condensed nuclear chromosome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: DNA mismatch repair protein Mlh3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1848,123,263 - 48,153,989 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl848,124,105 - 48,154,102 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha847,806,221 - 47,838,110 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0848,349,721 - 48,381,613 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl848,351,734 - 48,381,134 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1848,020,522 - 48,052,403 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0848,042,010 - 48,073,886 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0848,440,485 - 48,472,367 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
MLH3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1848,123,263 - 48,153,989 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl848,124,105 - 48,154,102 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha847,806,221 - 47,838,110 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0848,349,721 - 48,381,613 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl848,351,734 - 48,381,134 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1848,020,522 - 48,052,403 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0848,042,010 - 48,073,886 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0848,440,485 - 48,472,367 (-)NCBIUU_Cfam_GSD_1.0
MLH3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381475,013,775 - 75,051,467 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1475,013,769 - 75,051,532 (-)EnsemblGRCh38hg38GRCh38
GRCh371475,480,478 - 75,518,170 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361474,550,220 - 74,587,988 (-)NCBINCBI36Build 36hg18NCBI36
Build 341474,553,052 - 74,587,886NCBI
Celera1455,518,160 - 55,555,906 (-)NCBICelera
Cytogenetic Map14q24.3NCBI
HuRef1455,648,309 - 55,686,423 (-)NCBIHuRef
CHM1_11475,419,018 - 75,456,769 (-)NCBICHM1_1
T2T-CHM13v2.01469,222,838 - 69,260,934 (-)NCBIT2T-CHM13v2.0
Mlh3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391285,281,240 - 85,317,421 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1285,281,294 - 85,317,373 (-)EnsemblGRCm39 Ensembl
GRCm381285,234,466 - 85,270,647 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1285,234,520 - 85,270,599 (-)EnsemblGRCm38mm10GRCm38
MGSCv371286,575,470 - 86,611,514 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361286,123,567 - 86,159,702 (-)NCBIMGSCv36mm8
Celera1286,692,170 - 86,728,214 (-)NCBICelera
Cytogenetic Map12D1NCBI
cM Map1239.61NCBI
Mlh3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86110,612,535 - 110,649,408 (-)NCBIGRCr8
mRatBN7.26104,881,483 - 104,917,686 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6104,881,483 - 104,917,728 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6105,051,106 - 105,087,218 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06105,349,977 - 105,386,089 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06104,719,639 - 104,755,751 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06109,059,386 - 109,095,876 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6109,059,341 - 109,095,557 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06116,461,410 - 116,497,654 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46109,280,910 - 109,318,893 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16109,285,219 - 109,322,303 (-)NCBI
Celera6102,704,430 - 102,740,558 (-)NCBICelera
Cytogenetic Map6q31NCBI
Mlh3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955523518,565 - 546,410 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955523515,409 - 547,257 (+)NCBIChiLan1.0ChiLan1.0
MLH3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21576,099,113 - 76,133,996 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11475,315,617 - 75,351,233 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01455,568,033 - 55,603,672 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11474,413,023 - 74,447,543 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1474,413,319 - 74,445,749 (-)Ensemblpanpan1.1panPan2
Mlh3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864027,873,503 - 27,906,386 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364884,164,918 - 4,195,517 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364884,164,322 - 4,195,408 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MLH3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12452,231,468 - 52,266,179 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605340,458,381 - 40,497,060 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mlh3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473426,642,946 - 26,674,315 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473426,642,800 - 26,677,187 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MLH3
178 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 6 1 8 5
Low 5 5 16 6 6 6 6 6 11 5 6
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005623667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005623668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022422217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022422218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483803 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038591365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_537511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002629329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005329689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005363544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005397999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005431244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000026947   ⟹   ENSCAFP00000025050
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl848,124,105 - 48,152,541 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000026951   ⟹   ENSCAFP00000025054
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl848,124,105 - 48,153,385 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000064605   ⟹   ENSCAFP00000046088
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl848,124,105 - 48,154,102 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000066119   ⟹   ENSCAFP00000064404
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl848,124,105 - 48,154,102 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000068314   ⟹   ENSCAFP00000061106
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl848,124,105 - 48,152,541 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000075779   ⟹   ENSCAFP00000058101
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl848,124,105 - 48,154,102 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000079376   ⟹   ENSCAFP00000055223
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl848,124,105 - 48,152,541 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000079521   ⟹   ENSCAFP00000066717
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl848,124,105 - 48,154,102 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845026811   ⟹   ENSCAFP00845021114
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl848,351,734 - 48,381,134 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845026826   ⟹   ENSCAFP00845021125
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl848,351,734 - 48,381,134 (-)Ensembl
RefSeq Acc Id: XM_005623667   ⟹   XP_005623724
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1848,123,263 - 48,153,573 (-)NCBI
Dog10K_Boxer_Tasha847,806,221 - 47,837,692 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005623668   ⟹   XP_005623725
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1848,123,263 - 48,153,865 (-)NCBI
Dog10K_Boxer_Tasha847,806,221 - 47,837,891 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022422217   ⟹   XP_022277925
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1848,123,263 - 48,153,989 (-)NCBI
Dog10K_Boxer_Tasha847,806,221 - 47,838,110 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022422218   ⟹   XP_022277926
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1848,123,263 - 48,153,977 (-)NCBI
Dog10K_Boxer_Tasha847,806,221 - 47,838,087 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038483798   ⟹   XP_038339726
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1848,020,522 - 48,052,403 (-)NCBI
RefSeq Acc Id: XM_038483799   ⟹   XP_038339727
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1848,020,522 - 48,052,403 (-)NCBI
RefSeq Acc Id: XM_038483800   ⟹   XP_038339728
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1848,020,522 - 48,051,983 (-)NCBI
RefSeq Acc Id: XM_038483801   ⟹   XP_038339729
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1848,020,522 - 48,052,184 (-)NCBI
RefSeq Acc Id: XM_038483802   ⟹   XP_038339730
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1848,034,553 - 48,052,403 (-)NCBI
RefSeq Acc Id: XM_038483803   ⟹   XP_038339731
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1848,020,522 - 48,052,380 (-)NCBI
RefSeq Acc Id: XM_038545279   ⟹   XP_038401207
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0848,440,485 - 48,472,367 (-)NCBI
RefSeq Acc Id: XM_038545280   ⟹   XP_038401208
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0848,440,485 - 48,472,367 (-)NCBI
RefSeq Acc Id: XM_038545281   ⟹   XP_038401209
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0848,440,485 - 48,471,949 (-)NCBI
RefSeq Acc Id: XM_038545282   ⟹   XP_038401210
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0848,440,485 - 48,472,148 (-)NCBI
RefSeq Acc Id: XM_038545283   ⟹   XP_038401211
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0848,454,513 - 48,472,367 (-)NCBI
RefSeq Acc Id: XM_038545284   ⟹   XP_038401212
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0848,440,485 - 48,472,344 (-)NCBI
RefSeq Acc Id: XM_038591365   ⟹   XP_038447293
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha847,820,251 - 47,838,110 (-)NCBI
RefSeq Acc Id: XM_038609375   ⟹   XP_038465303
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0848,042,010 - 48,073,886 (-)NCBI
RefSeq Acc Id: XM_038609376   ⟹   XP_038465304
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0848,042,010 - 48,073,886 (-)NCBI
RefSeq Acc Id: XM_038609377   ⟹   XP_038465305
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0848,042,010 - 48,073,467 (-)NCBI
RefSeq Acc Id: XM_038609378   ⟹   XP_038465306
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0848,042,010 - 48,073,667 (-)NCBI
RefSeq Acc Id: XM_038609379   ⟹   XP_038465307
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0848,056,032 - 48,073,886 (-)NCBI
RefSeq Acc Id: XM_038609380   ⟹   XP_038465308
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0848,042,010 - 48,073,863 (-)NCBI
RefSeq Acc Id: XM_038674200   ⟹   XP_038530128
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0848,349,721 - 48,381,613 (-)NCBI
RefSeq Acc Id: XM_038674201   ⟹   XP_038530129
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0848,349,721 - 48,381,613 (-)NCBI
RefSeq Acc Id: XM_038674202   ⟹   XP_038530130
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0848,349,721 - 48,381,193 (-)NCBI
RefSeq Acc Id: XM_038674203   ⟹   XP_038530131
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0848,349,721 - 48,381,394 (-)NCBI
RefSeq Acc Id: XM_038674204   ⟹   XP_038530132
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0848,363,756 - 48,381,613 (-)NCBI
RefSeq Acc Id: XM_038674205   ⟹   XP_038530133
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0848,349,721 - 48,381,590 (-)NCBI
RefSeq Acc Id: XM_537511   ⟹   XP_537511
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1848,123,263 - 48,153,989 (-)NCBI
Dog10K_Boxer_Tasha847,806,221 - 47,838,110 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002629329
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1848,123,263 - 48,153,989 (-)NCBI
Dog10K_Boxer_Tasha847,806,221 - 47,838,110 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005329689
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1848,020,522 - 48,052,403 (-)NCBI
RefSeq Acc Id: XR_005363544
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0848,440,485 - 48,472,367 (-)NCBI
RefSeq Acc Id: XR_005397999
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0848,042,010 - 48,073,886 (-)NCBI
RefSeq Acc Id: XR_005431244
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0848,349,721 - 48,381,613 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005623724 (Get FASTA)   NCBI Sequence Viewer  
  XP_005623725 (Get FASTA)   NCBI Sequence Viewer  
  XP_022277925 (Get FASTA)   NCBI Sequence Viewer  
  XP_022277926 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339726 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339727 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339728 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339729 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339730 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339731 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401207 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401208 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401209 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401210 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401211 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401212 (Get FASTA)   NCBI Sequence Viewer  
  XP_038447293 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465303 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465304 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465305 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465306 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465307 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465308 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530128 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530129 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530130 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530131 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530132 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530133 (Get FASTA)   NCBI Sequence Viewer  
  XP_537511 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000025050.3
  ENSCAFP00000025054.5
  ENSCAFP00000055223.2
  ENSCAFP00000058101.2
  ENSCAFP00000061106.2
  ENSCAFP00030027405.1
  ENSCAFP00030027461.1
  ENSCAFP00030027516.1
  ENSCAFP00030027568.1
  ENSCAFP00030027650.1
  ENSCAFP00040021756.1
  ENSCAFP00040021823.1
  ENSCAFP00040021909.1
  ENSCAFP00040021999.1
  ENSCAFP00040022066.1
  ENSCAFP00040022121.1
  ENSCAFP00845021114
  ENSCAFP00845021114.1
  ENSCAFP00845021125.1
RefSeq Acc Id: XP_005623725   ⟸   XM_005623668
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SJ31 (UniProtKB/TrEMBL),   A0A8C0QTZ1 (UniProtKB/TrEMBL),   A0A8P0SL21 (UniProtKB/TrEMBL),   A0A8C0SHW0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_537511   ⟸   XM_537511
- Peptide Label: isoform X1
- UniProtKB: A0A8C0SHW0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005623724   ⟸   XM_005623667
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SJ31 (UniProtKB/TrEMBL),   A0A8C0QTZ1 (UniProtKB/TrEMBL),   A0A8P0SL21 (UniProtKB/TrEMBL),   A0A8C0SHW0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022277925   ⟸   XM_022422217
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JNE2 (UniProtKB/TrEMBL),   A0A8C0SIW0 (UniProtKB/TrEMBL),   A0A8I3NLD8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022277926   ⟸   XM_022422218
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SKR2 (UniProtKB/TrEMBL),   A0A8P0SLA5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000046088   ⟸   ENSCAFT00000064605
RefSeq Acc Id: ENSCAFP00000055223   ⟸   ENSCAFT00000079376
RefSeq Acc Id: ENSCAFP00000061106   ⟸   ENSCAFT00000068314
RefSeq Acc Id: ENSCAFP00000066717   ⟸   ENSCAFT00000079521
RefSeq Acc Id: ENSCAFP00000025054   ⟸   ENSCAFT00000026951
RefSeq Acc Id: ENSCAFP00000025050   ⟸   ENSCAFT00000026947
RefSeq Acc Id: ENSCAFP00000058101   ⟸   ENSCAFT00000075779
RefSeq Acc Id: ENSCAFP00000064404   ⟸   ENSCAFT00000066119
RefSeq Acc Id: XP_038339727   ⟸   XM_038483799
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038339726   ⟸   XM_038483798
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038339731   ⟸   XM_038483803
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038339729   ⟸   XM_038483801
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038339728   ⟸   XM_038483800
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038339730   ⟸   XM_038483802
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038465304   ⟸   XM_038609376
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038465303   ⟸   XM_038609375
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038465308   ⟸   XM_038609380
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038465306   ⟸   XM_038609378
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038465305   ⟸   XM_038609377
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038465307   ⟸   XM_038609379
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038530129   ⟸   XM_038674201
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JNE2 (UniProtKB/TrEMBL),   A0A8C0SIW0 (UniProtKB/TrEMBL),   A0A8I3NLD8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038530128   ⟸   XM_038674200
- Peptide Label: isoform X1
- UniProtKB: A0A8C0SHW0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038530133   ⟸   XM_038674205
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SKR2 (UniProtKB/TrEMBL),   A0A8P0SLA5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038530131   ⟸   XM_038674203
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SJ31 (UniProtKB/TrEMBL),   A0A8C0QTZ1 (UniProtKB/TrEMBL),   A0A8P0SL21 (UniProtKB/TrEMBL),   A0A8C0SHW0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038530130   ⟸   XM_038674202
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SJ31 (UniProtKB/TrEMBL),   A0A8C0QTZ1 (UniProtKB/TrEMBL),   A0A8P0SL21 (UniProtKB/TrEMBL),   A0A8C0SHW0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038530132   ⟸   XM_038674204
- Peptide Label: isoform X4
- UniProtKB: A0A8P0P794 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038447293   ⟸   XM_038591365
- Peptide Label: isoform X4
- UniProtKB: A0A8P0P794 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401208   ⟸   XM_038545280
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JNE2 (UniProtKB/TrEMBL),   A0A8C0SIW0 (UniProtKB/TrEMBL),   A0A8I3NLD8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401207   ⟸   XM_038545279
- Peptide Label: isoform X1
- UniProtKB: A0A8C0SHW0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401212   ⟸   XM_038545284
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SKR2 (UniProtKB/TrEMBL),   A0A8P0SLA5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401210   ⟸   XM_038545282
- Peptide Label: isoform X3
- UniProtKB: A0A8C0QTZ1 (UniProtKB/TrEMBL),   A0A8C0SHW0 (UniProtKB/TrEMBL),   A0A8C0SJ31 (UniProtKB/TrEMBL),   A0A8P0SL21 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401209   ⟸   XM_038545281
- Peptide Label: isoform X3
- UniProtKB: A0A8C0QTZ1 (UniProtKB/TrEMBL),   A0A8C0SHW0 (UniProtKB/TrEMBL),   A0A8C0SJ31 (UniProtKB/TrEMBL),   A0A8P0SL21 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401211   ⟸   XM_038545283
- Peptide Label: isoform X4
- UniProtKB: A0A8P0P794 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845021125   ⟸   ENSCAFT00845026826
RefSeq Acc Id: ENSCAFP00845021114   ⟸   ENSCAFT00845026811

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000017012 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030017023 UniProtKB/TrEMBL
  ENSCAFG00040013563 UniProtKB/TrEMBL
  ENSCAFG00845014944 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000026947.4 UniProtKB/TrEMBL
  ENSCAFT00000026951.6 UniProtKB/TrEMBL
  ENSCAFT00000068314.2 UniProtKB/TrEMBL
  ENSCAFT00000075779.2 UniProtKB/TrEMBL
  ENSCAFT00000079376.2 UniProtKB/TrEMBL
  ENSCAFT00030031410.1 UniProtKB/TrEMBL
  ENSCAFT00030031482.1 UniProtKB/TrEMBL
  ENSCAFT00030031550.1 UniProtKB/TrEMBL
  ENSCAFT00030031612.1 UniProtKB/TrEMBL
  ENSCAFT00030031703.1 UniProtKB/TrEMBL
  ENSCAFT00040025028.1 UniProtKB/TrEMBL
  ENSCAFT00040025104.1 UniProtKB/TrEMBL
  ENSCAFT00040025201.1 UniProtKB/TrEMBL
  ENSCAFT00040025311.1 UniProtKB/TrEMBL
  ENSCAFT00040025380.1 UniProtKB/TrEMBL
  ENSCAFT00040025441.1 UniProtKB/TrEMBL
  ENSCAFT00845026811 ENTREZGENE
  ENSCAFT00845026811.1 UniProtKB/TrEMBL
  ENSCAFT00845026826.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.1370.100 UniProtKB/TrEMBL
  3.30.1540.20 UniProtKB/TrEMBL
  3.30.230.10 UniProtKB/TrEMBL
  3.30.565.10 UniProtKB/TrEMBL
InterPro DNA_mismatch_repair_CS UniProtKB/TrEMBL
  DNA_mismatch_S5_2-like UniProtKB/TrEMBL
  HATPase_C_sf UniProtKB/TrEMBL
  MutL/Mlh/Pms UniProtKB/TrEMBL
  MutL/Mlh/PMS UniProtKB/TrEMBL
  MutL_C UniProtKB/TrEMBL
  MutL_C_dimsub UniProtKB/TrEMBL
  MutL_C_regsub UniProtKB/TrEMBL
  MutL_C_sf UniProtKB/TrEMBL
  Ribosomal_S5_D2-typ_fold UniProtKB/TrEMBL
  Ribosomal_S5_D2-typ_fold_subgr UniProtKB/TrEMBL
KEGG Report cfa:480389 UniProtKB/TrEMBL
NCBI Gene MLH3 ENTREZGENE
PANTHER PTHR10073 UniProtKB/TrEMBL
  PTHR10073:SF47 UniProtKB/TrEMBL
Pfam HATPase_c_3 UniProtKB/TrEMBL
  MutL_C UniProtKB/TrEMBL
PROSITE DNA_MISMATCH_REPAIR_1 UniProtKB/TrEMBL
SMART DNA_mis_repair UniProtKB/TrEMBL
  MutL_C UniProtKB/TrEMBL
Superfamily-SCOP SSF118116 UniProtKB/TrEMBL
  SSF54211 UniProtKB/TrEMBL
  SSF55874 UniProtKB/TrEMBL
UniProt A0A8C0JNE2 ENTREZGENE
  A0A8C0NHV5_CANLF UniProtKB/TrEMBL
  A0A8C0NJS5_CANLF UniProtKB/TrEMBL
  A0A8C0NP14_CANLF UniProtKB/TrEMBL
  A0A8C0QTZ1 ENTREZGENE
  A0A8C0RM55_CANLF UniProtKB/TrEMBL
  A0A8C0SHW0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SIC1_CANLF UniProtKB/TrEMBL
  A0A8C0SIT9_CANLF UniProtKB/TrEMBL
  A0A8C0SIW0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SJ31 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SKR2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NLD8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NWD3_CANLF UniProtKB/TrEMBL
  A0A8P0P794 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SL21 ENTREZGENE
  A0A8P0SLA5 ENTREZGENE
UniProt Secondary A0A8P0PA26 UniProtKB/TrEMBL
  A0A8P0SL21 UniProtKB/TrEMBL
  A0A8P0SLA5 UniProtKB/TrEMBL
VGNC ID VGNC:43258 ENTREZGENE