POLE4 (DNA polymerase epsilon 4, accessory subunit) - Rat Genome Database

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Gene: POLE4 (DNA polymerase epsilon 4, accessory subunit) Canis lupus familiaris
Analyze
Symbol: POLE4
Name: DNA polymerase epsilon 4, accessory subunit
RGD ID: 12073427
Description: ENCODES a protein that exhibits protein heterodimerization activity (inferred); INVOLVED IN DNA-templated DNA replication (inferred); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH genetic disease (ortholog); FOUND IN epsilon DNA polymerase complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: DNA polymerase epsilon subunit 4; polymerase (DNA-directed), epsilon 4 (p12 subunit); polymerase (DNA-directed), epsilon 4, accessory subunit
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11748,241,641 - 48,251,679 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1747,884,498 - 47,894,541 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01749,082,627 - 49,114,057 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1749,104,025 - 49,114,020 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11748,097,751 - 48,129,173 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01748,162,605 - 48,194,065 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01748,724,719 - 48,756,385 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
POLE4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11748,241,641 - 48,251,679 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1747,884,498 - 47,894,541 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01749,082,627 - 49,114,057 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1749,104,025 - 49,114,020 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11748,097,751 - 48,129,173 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01748,162,605 - 48,194,065 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01748,724,719 - 48,756,385 (-)NCBIUU_Cfam_GSD_1.0
POLE4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38274,958,643 - 74,970,128 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl274,958,643 - 74,970,128 (+)EnsemblGRCh38hg38GRCh38
GRCh37275,185,770 - 75,197,255 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36275,039,283 - 75,050,367 (+)NCBINCBI36Build 36hg18NCBI36
Build 34275,097,429 - 75,108,514NCBI
Celera275,017,063 - 75,028,146 (+)NCBICelera
Cytogenetic Map2p12NCBI
HuRef274,922,607 - 74,933,690 (+)NCBIHuRef
CHM1_1275,115,083 - 75,126,167 (+)NCBICHM1_1
T2T-CHM13v2.0274,967,499 - 74,978,982 (+)NCBIT2T-CHM13v2.0
Pole4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39682,593,513 - 82,629,985 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl682,595,973 - 82,682,346 (-)EnsemblGRCm39 Ensembl
GRCm38682,616,532 - 82,653,043 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl682,618,992 - 82,705,365 (-)EnsemblGRCm38mm10GRCm38
MGSCv37682,596,706 - 82,602,859 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36682,612,370 - 82,618,523 (-)NCBIMGSCv36mm8
Celera684,622,456 - 84,628,609 (-)NCBICelera
Cytogenetic Map6C3NCBI
cM Map635.94NCBI
Pole4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84116,723,040 - 116,728,873 (-)NCBIGRCr8
mRatBN7.24115,165,285 - 115,171,097 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4115,165,285 - 115,171,097 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4120,628,783 - 120,634,693 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04116,403,999 - 116,409,911 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04115,025,483 - 115,031,343 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04113,491,644 - 113,497,455 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4113,491,644 - 113,497,455 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04178,170,534 - 178,176,366 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44116,856,445 - 116,862,256 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14117,101,557 - 117,106,737 (-)NCBI
Celera4104,161,837 - 104,167,648 (-)NCBICelera
Cytogenetic Map4q34NCBI
Pole4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542410,839,639 - 10,844,985 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542410,839,639 - 10,844,985 (-)NCBIChiLan1.0ChiLan1.0
POLE4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21251,421,620 - 51,432,858 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A51,424,374 - 51,435,474 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A75,023,087 - 75,034,178 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A76,526,385 - 76,537,463 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A76,526,385 - 76,537,463 (+)Ensemblpanpan1.1panPan2
Pole4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244062929,569,711 - 9,576,535 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365561,160,385 - 1,170,843 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365561,161,359 - 1,167,283 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
POLE4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl368,098,587 - 68,117,278 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1368,103,028 - 68,117,308 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2371,280,587 - 71,294,748 (-)NCBISscrofa10.2Sscrofa10.2susScr3
POLE4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11432,313,399 - 32,320,084 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1432,312,893 - 32,320,016 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604579,854,804 - 79,914,357 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pole4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474928,537,001 - 28,547,737 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474928,538,347 - 28,547,722 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in POLE4
175 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 22 6 6 6 6 6 12 8 10 6
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022404772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022404773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022404774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022404775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022404776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022404777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_540212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00845029596   ⟹   ENSCAFP00845023246
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1749,104,025 - 49,114,020 (-)Ensembl
RefSeq Acc Id: XM_022404772   ⟹   XP_022260480
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11748,246,075 - 48,251,679 (-)NCBI
Dog10K_Boxer_Tasha1747,889,439 - 47,894,541 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022404773   ⟹   XP_022260481
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11748,246,608 - 48,251,679 (-)NCBI
Dog10K_Boxer_Tasha1747,889,439 - 47,894,541 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022404774   ⟹   XP_022260482
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11748,246,608 - 48,251,679 (-)NCBI
Dog10K_Boxer_Tasha1747,889,439 - 47,894,541 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022404775   ⟹   XP_022260483
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11748,246,608 - 48,251,679 (-)NCBI
Dog10K_Boxer_Tasha1747,889,439 - 47,894,541 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022404776   ⟹   XP_022260484
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11748,241,641 - 48,251,679 (-)NCBI
Dog10K_Boxer_Tasha1747,884,498 - 47,894,541 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022404777   ⟹   XP_022260485
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11748,241,641 - 48,251,679 (-)NCBI
Dog10K_Boxer_Tasha1747,884,498 - 47,894,541 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038499047   ⟹   XP_038354975
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11748,124,079 - 48,129,173 (-)NCBI
RefSeq Acc Id: XM_038499048   ⟹   XP_038354976
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11748,124,079 - 48,129,173 (-)NCBI
RefSeq Acc Id: XM_038499049   ⟹   XP_038354977
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11748,124,079 - 48,129,173 (-)NCBI
RefSeq Acc Id: XM_038499050   ⟹   XP_038354978
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11748,124,079 - 48,129,173 (-)NCBI
RefSeq Acc Id: XM_038499051   ⟹   XP_038354979
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11748,119,143 - 48,129,173 (-)NCBI
RefSeq Acc Id: XM_038499052   ⟹   XP_038354980
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11748,097,961 - 48,129,173 (-)NCBI
RefSeq Acc Id: XM_038499053   ⟹   XP_038354981
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11748,119,143 - 48,129,173 (-)NCBI
RefSeq Acc Id: XM_038499054   ⟹   XP_038354982
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11748,097,751 - 48,129,173 (-)NCBI
RefSeq Acc Id: XM_038499055   ⟹   XP_038354983
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11748,119,143 - 48,129,173 (-)NCBI
RefSeq Acc Id: XM_038561635   ⟹   XP_038417563
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01748,751,276 - 48,756,385 (-)NCBI
RefSeq Acc Id: XM_038561636   ⟹   XP_038417564
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01748,751,276 - 48,756,385 (-)NCBI
RefSeq Acc Id: XM_038561637   ⟹   XP_038417565
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01748,751,276 - 48,756,385 (-)NCBI
RefSeq Acc Id: XM_038561638   ⟹   XP_038417566
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01748,751,276 - 48,756,385 (-)NCBI
RefSeq Acc Id: XM_038561639   ⟹   XP_038417567
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01748,746,138 - 48,756,385 (-)NCBI
RefSeq Acc Id: XM_038561640   ⟹   XP_038417568
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01748,724,929 - 48,756,385 (-)NCBI
RefSeq Acc Id: XM_038561641   ⟹   XP_038417569
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01748,746,138 - 48,756,385 (-)NCBI
RefSeq Acc Id: XM_038561642   ⟹   XP_038417570
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01748,724,719 - 48,756,385 (-)NCBI
RefSeq Acc Id: XM_038561643   ⟹   XP_038417571
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01748,746,138 - 48,756,385 (-)NCBI
RefSeq Acc Id: XM_038625676   ⟹   XP_038481604
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01748,188,939 - 48,194,065 (-)NCBI
RefSeq Acc Id: XM_038625677   ⟹   XP_038481605
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01748,188,939 - 48,194,065 (-)NCBI
RefSeq Acc Id: XM_038625678   ⟹   XP_038481606
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01748,188,939 - 48,194,065 (-)NCBI
RefSeq Acc Id: XM_038625679   ⟹   XP_038481607
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01748,188,939 - 48,194,065 (-)NCBI
RefSeq Acc Id: XM_038625680   ⟹   XP_038481608
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01748,183,988 - 48,194,065 (-)NCBI
RefSeq Acc Id: XM_038625681   ⟹   XP_038481609
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01748,162,815 - 48,194,065 (-)NCBI
RefSeq Acc Id: XM_038625682   ⟹   XP_038481610
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01748,183,988 - 48,194,065 (-)NCBI
RefSeq Acc Id: XM_038625683   ⟹   XP_038481611
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01748,162,605 - 48,194,065 (-)NCBI
RefSeq Acc Id: XM_038625684   ⟹   XP_038481612
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01748,183,988 - 48,194,065 (-)NCBI
RefSeq Acc Id: XM_038691603   ⟹   XP_038547531
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01749,108,960 - 49,114,057 (-)NCBI
RefSeq Acc Id: XM_038691604   ⟹   XP_038547532
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01749,108,960 - 49,114,057 (-)NCBI
RefSeq Acc Id: XM_038691605   ⟹   XP_038547533
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01749,108,960 - 49,114,057 (-)NCBI
RefSeq Acc Id: XM_038691606   ⟹   XP_038547534
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01749,108,960 - 49,114,057 (-)NCBI
RefSeq Acc Id: XM_038691607   ⟹   XP_038547535
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01749,104,023 - 49,114,057 (-)NCBI
RefSeq Acc Id: XM_038691608   ⟹   XP_038547536
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01749,082,837 - 49,114,057 (-)NCBI
RefSeq Acc Id: XM_038691609   ⟹   XP_038547537
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01749,104,023 - 49,114,057 (-)NCBI
RefSeq Acc Id: XM_038691610   ⟹   XP_038547538
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01749,082,627 - 49,114,057 (-)NCBI
RefSeq Acc Id: XM_038691611   ⟹   XP_038547539
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01749,104,023 - 49,114,057 (-)NCBI
RefSeq Acc Id: XM_540212   ⟹   XP_540212
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11748,241,641 - 48,251,679 (-)NCBI
Dog10K_Boxer_Tasha1747,884,498 - 47,894,541 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_022260480 (Get FASTA)   NCBI Sequence Viewer  
  XP_022260481 (Get FASTA)   NCBI Sequence Viewer  
  XP_022260482 (Get FASTA)   NCBI Sequence Viewer  
  XP_022260483 (Get FASTA)   NCBI Sequence Viewer  
  XP_022260484 (Get FASTA)   NCBI Sequence Viewer  
  XP_022260485 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354975 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354976 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354977 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354978 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354979 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354980 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354981 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354982 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354983 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417563 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417564 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417565 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417566 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417567 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417568 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417569 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417570 (Get FASTA)   NCBI Sequence Viewer  
  XP_038417571 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481604 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481605 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481606 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481607 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481608 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481609 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481610 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481611 (Get FASTA)   NCBI Sequence Viewer  
  XP_038481612 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547531 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547532 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547533 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547534 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547535 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547536 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547537 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547538 (Get FASTA)   NCBI Sequence Viewer  
  XP_038547539 (Get FASTA)   NCBI Sequence Viewer  
  XP_540212 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000012044.5
  ENSCAFP00000047059.2
  ENSCAFP00000067158.1
  ENSCAFP00000074610.1
  ENSCAFP00030028840.1
  ENSCAFP00040011043.1
  ENSCAFP00040011056.1
  ENSCAFP00845023246
  ENSCAFP00845023246.1
Reference Protein Sequences
RefSeq Acc Id: XP_540212   ⟸   XM_540212
- Peptide Label: isoform X9
- UniProtKB: A0A8C0RZN6 (UniProtKB/TrEMBL),   A0A8I3P0P6 (UniProtKB/TrEMBL),   A0A8C0QBR4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022260485   ⟸   XM_022404777
- Peptide Label: isoform X8
- UniProtKB: A0A8C0QBR4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022260484   ⟸   XM_022404776
- Peptide Label: isoform X7
- UniProtKB: A0A8C0QBR4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022260480   ⟸   XM_022404772
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_022260483   ⟸   XM_022404775
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_022260482   ⟸   XM_022404774
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_022260481   ⟸   XM_022404773
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_038354982   ⟸   XM_038499054
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038354980   ⟸   XM_038499052
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038354983   ⟸   XM_038499055
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038354981   ⟸   XM_038499053
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038354979   ⟸   XM_038499051
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038354978   ⟸   XM_038499050
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038354977   ⟸   XM_038499049
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038354976   ⟸   XM_038499048
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038354975   ⟸   XM_038499047
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038481611   ⟸   XM_038625683
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038481609   ⟸   XM_038625681
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038481612   ⟸   XM_038625684
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038481610   ⟸   XM_038625682
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038481608   ⟸   XM_038625680
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038481607   ⟸   XM_038625679
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038481606   ⟸   XM_038625678
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038481605   ⟸   XM_038625677
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038481604   ⟸   XM_038625676
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038547538   ⟸   XM_038691610
- Peptide Label: isoform X2
- UniProtKB: A0A8C0QBR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038547536   ⟸   XM_038691608
- Peptide Label: isoform X1
- UniProtKB: A0A8C0QBR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038547539   ⟸   XM_038691611
- Peptide Label: isoform X9
- UniProtKB: A0A8C0RZN6 (UniProtKB/TrEMBL),   A0A8I3P0P6 (UniProtKB/TrEMBL),   A0A8C0QBR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038547537   ⟸   XM_038691609
- Peptide Label: isoform X8
- UniProtKB: A0A8C0QBR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038547535   ⟸   XM_038691607
- Peptide Label: isoform X7
- UniProtKB: A0A8C0QBR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038547534   ⟸   XM_038691606
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038547533   ⟸   XM_038691605
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038547532   ⟸   XM_038691604
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038547531   ⟸   XM_038691603
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038417570   ⟸   XM_038561642
- Peptide Label: isoform X2
- UniProtKB: A0A8C0QBR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038417568   ⟸   XM_038561640
- Peptide Label: isoform X1
- UniProtKB: A0A8C0QBR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038417571   ⟸   XM_038561643
- Peptide Label: isoform X9
- UniProtKB: A0A8C0QBR4 (UniProtKB/TrEMBL),   A0A8C0RZN6 (UniProtKB/TrEMBL),   A0A8I3P0P6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038417569   ⟸   XM_038561641
- Peptide Label: isoform X8
- UniProtKB: A0A8C0QBR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038417567   ⟸   XM_038561639
- Peptide Label: isoform X7
- UniProtKB: A0A8C0QBR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038417566   ⟸   XM_038561638
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038417565   ⟸   XM_038561637
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038417564   ⟸   XM_038561636
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038417563   ⟸   XM_038561635
- Peptide Label: isoform X3
RefSeq Acc Id: ENSCAFP00845023246   ⟸   ENSCAFT00845029596
Protein Domains
Transcription factor CBF/NF-Y/archaeal histone


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000008186 UniProtKB/TrEMBL
  ENSCAFG00030017927 UniProtKB/TrEMBL
  ENSCAFG00040006851 UniProtKB/TrEMBL
  ENSCAFG00845016702 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000013014.5 UniProtKB/TrEMBL
  ENSCAFT00000084842.2 UniProtKB/TrEMBL
  ENSCAFT00000098727.1 UniProtKB/TrEMBL
  ENSCAFT00000104070.1 UniProtKB/TrEMBL
  ENSCAFT00030033063.1 UniProtKB/TrEMBL
  ENSCAFT00040012741.1 UniProtKB/TrEMBL
  ENSCAFT00040012756.1 UniProtKB/TrEMBL
  ENSCAFT00845029596 ENTREZGENE
  ENSCAFT00845029596.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.20.10 UniProtKB/TrEMBL
InterPro CBFA_NFYB_domain UniProtKB/TrEMBL
  Histone-fold UniProtKB/TrEMBL
NCBI Gene POLE4 ENTREZGENE
PANTHER DNA POLYMERASE EPSILON SUBUNIT 4 UniProtKB/TrEMBL
  HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED UniProtKB/TrEMBL
Pfam CBFD_NFYB_HMF UniProtKB/TrEMBL
Superfamily-SCOP SSF47113 UniProtKB/TrEMBL
UniProt A0A8C0QBR4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RZN6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3P0P6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PS93_CANLF UniProtKB/TrEMBL
  A0A8P0SDD0_CANLF UniProtKB/TrEMBL
  A0A8P0T025_CANLF UniProtKB/TrEMBL
  A0A8P0TII6_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:111642 ENTREZGENE