TMEM132D (transmembrane protein 132D) - Rat Genome Database

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Gene: TMEM132D (transmembrane protein 132D) Canis lupus familiaris
Analyze
Symbol: TMEM132D
Name: transmembrane protein 132D
RGD ID: 12068696
Description: ASSOCIATED WITH genetic disease (ortholog); Liver Neoplasms (ortholog); lung small cell carcinoma (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1262,152,137 - 2,664,517 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl262,074,424 - 2,662,470 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha262,349,285 - 2,873,779 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0262,394,914 - 2,922,529 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl262,316,723 - 2,914,971 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1262,329,743 - 2,855,051 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0262,426,973 - 2,952,018 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0262,337,698 - 2,862,992 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)

Molecular Function

References

Genomics

Comparative Map Data
TMEM132D
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1262,152,137 - 2,664,517 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl262,074,424 - 2,662,470 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha262,349,285 - 2,873,779 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0262,394,914 - 2,922,529 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl262,316,723 - 2,914,971 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1262,329,743 - 2,855,051 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0262,426,973 - 2,952,018 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0262,337,698 - 2,862,992 (+)NCBIUU_Cfam_GSD_1.0
TMEM132D
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812129,071,726 - 129,904,025 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12129,071,725 - 129,904,025 (-)EnsemblGRCh38hg38GRCh38
GRCh3712129,556,271 - 130,388,570 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3612128,122,224 - 128,954,166 (-)NCBINCBI36Build 36hg18NCBI36
Celera12129,169,510 - 129,999,521 (-)NCBICelera
Cytogenetic Map12q24.33NCBI
HuRef12126,540,674 - 127,373,755 (-)NCBIHuRef
CHM1_112129,377,103 - 130,206,983 (-)NCBICHM1_1
T2T-CHM13v2.012129,103,059 - 129,940,259 (-)NCBIT2T-CHM13v2.0
Tmem132d
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395127,860,555 - 128,510,141 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5127,858,694 - 128,510,141 (-)EnsemblGRCm39 Ensembl
GRCm385127,783,491 - 128,433,077 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5127,781,630 - 128,433,077 (-)EnsemblGRCm38mm10GRCm38
MGSCv375128,263,861 - 128,938,937 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365128,072,694 - 128,747,770 (-)NCBIMGSCv36mm8
Celera5124,820,557 - 125,462,636 (-)NCBICelera
Cytogenetic Map5G1.3NCBI
cM Map566.32NCBI
Tmem132d
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81233,905,971 - 34,553,267 (+)NCBIGRCr8
mRatBN7.21228,270,039 - 28,917,324 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1228,270,712 - 28,915,374 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1229,413,968 - 30,052,336 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01230,025,411 - 30,663,783 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01229,083,725 - 29,722,960 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01231,934,343 - 32,607,768 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1231,934,343 - 32,607,370 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01233,851,101 - 34,516,557 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41229,495,711 - 29,964,532 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11229,359,093 - 29,827,920 (+)NCBI
Celera1229,961,960 - 30,603,084 (+)NCBICelera
Cytogenetic Map12q13-q14NCBI
Tmem132d
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554821,672,267 - 2,165,302 (+)NCBIChiLan1.0ChiLan1.0
TMEM132D
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210137,143,723 - 137,964,704 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112137,141,843 - 137,961,720 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012126,695,759 - 127,517,557 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112130,916,623 - 131,537,582 (-)NCBIpanpan1.1PanPan1.1panPan2
Tmem132d
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118123,595,722 - 124,090,049 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936660631,033 - 1,125,358 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM132D
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1425,144,430 - 25,913,052 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11425,144,440 - 25,919,018 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21426,796,369 - 27,458,347 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM132D
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111124,425,472 - 125,256,613 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037119,851,305 - 120,683,599 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem132d
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474726,402,346 - 26,886,135 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TMEM132D
6823 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 6
Low 2 1 12 2 4 2 5 6 8 6 1
Below cutoff 3 4 10 4 2 4 1 6 4 5

Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00000049250   ⟹   ENSCAFP00000040184
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl262,074,424 - 2,662,470 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845053462   ⟹   ENSCAFP00845042006
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl262,316,723 - 2,914,971 (+)Ensembl
RefSeq Acc Id: XM_005636092   ⟹   XP_005636149
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1262,152,137 - 2,664,517 (+)NCBI
Dog10K_Boxer_Tasha262,349,285 - 2,873,779 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038436339   ⟹   XP_038292267
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0262,394,914 - 2,922,529 (+)NCBI
RefSeq Acc Id: XM_038511260   ⟹   XP_038367188
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1262,329,743 - 2,855,051 (+)NCBI
RefSeq Acc Id: XM_038574733   ⟹   XP_038430661
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0262,337,698 - 2,862,992 (+)NCBI
RefSeq Acc Id: XM_038638929   ⟹   XP_038494857
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0262,426,973 - 2,952,018 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_005636149   ⟸   XM_005636092
- UniProtKB: A0A8C0TDA7 (UniProtKB/TrEMBL),   A0A8I3SCK6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000040184   ⟸   ENSCAFT00000049250
RefSeq Acc Id: XP_038367188   ⟸   XM_038511260
RefSeq Acc Id: XP_038494857   ⟸   XM_038638929
RefSeq Acc Id: XP_038292267   ⟸   XM_038436339
- UniProtKB: A0A8I3SCK6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038430661   ⟸   XM_038574733
- UniProtKB: A0A8C0TDA7 (UniProtKB/TrEMBL),   A0A8I3SCK6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845042006   ⟸   ENSCAFT00845053462
Protein Domains
Transmembrane protein family 132 middle   Transmembrane protein TMEM132 C-terminal   Transmembrane protein TMEM132 N-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000006812 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030019581 UniProtKB/TrEMBL
  ENSCAFG00040021886 UniProtKB/TrEMBL
  ENSCAFG00845030146 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000049250.4 UniProtKB/TrEMBL
  ENSCAFT00030036008.1 UniProtKB/TrEMBL
  ENSCAFT00040040658.1 UniProtKB/TrEMBL
  ENSCAFT00845053462 ENTREZGENE
  ENSCAFT00845053462.1 UniProtKB/TrEMBL
InterPro TMEM132 UniProtKB/TrEMBL
  TMEM132_C UniProtKB/TrEMBL
  TMEM132_M UniProtKB/TrEMBL
  TMEM132_N UniProtKB/TrEMBL
NCBI Gene TMEM132D ENTREZGENE
PANTHER PTHR13388 UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN 132D UniProtKB/TrEMBL
Pfam TMEM132 UniProtKB/TrEMBL
  TMEM132D_C UniProtKB/TrEMBL
  TMEM132D_N UniProtKB/TrEMBL
UniProt A0A8C0NS25_CANLF UniProtKB/TrEMBL
  A0A8C0TDA7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3SCK6 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A8P0SU79 UniProtKB/TrEMBL
VGNC ID VGNC:47470 ENTREZGENE