ROPN1L (rhophilin associated tail protein 1 like)

Gene: ROPN1L (rhophilin associated tail protein 1 like) Canis lupus familiaris

Analyze

Symbol:

ROPN1L

Name:

rhophilin associated tail protein 1 like

RGD ID:

12067835

Description:

ENCODES a protein that exhibits identical protein binding (inferred); INVOLVED IN cilium movement (ortholog); flagellated sperm motility (ortholog); regulation of protein phosphorylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cilium (inferred); cytoplasm (inferred); motile cilium (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ropporin 1-like; ropporin-1-like protein

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	3,857,643 - 3,875,059 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	3,857,641 - 3,875,190 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	8,360,300 - 8,377,693 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	3,762,071 - 3,779,520 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	3,761,306 - 3,779,396 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	3,811,982 - 3,829,384 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	3,790,480 - 3,807,895 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	4,021,371 - 4,038,833 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cilium movement (IEA,ISO)

flagellated sperm motility (IEA,ISO)

regulation of protein phosphorylation (IEA,ISO)

sperm capacitation (IEA,ISO)

Cellular Component

cilium (IEA)

cytoplasm (IEA)

motile cilium (IEA)

radial spoke (IEA)

Molecular Function

identical protein binding (IEA)

protein binding (ISO)

References

Genomics

Comparative Map Data

ROPN1L
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	3,857,643 - 3,875,059 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	3,857,641 - 3,875,190 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	8,360,300 - 8,377,693 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	3,762,071 - 3,779,520 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	3,761,306 - 3,779,396 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	3,811,982 - 3,829,384 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	3,790,480 - 3,807,895 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	4,021,371 - 4,038,833 (-)	NCBI		UU_Cfam_GSD_1.0

ROPN1L
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	10,441,879 - 10,482,807 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	10,441,524 - 10,472,029 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38.p14 Ensembl	5	10,479,371 - 10,482,309 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	10,441,991 - 10,465,138 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	10,495,015 - 10,518,138 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	10,495,014 - 10,518,137	NCBI
Celera	5	10,480,140 - 10,503,231 (+)	NCBI		Celera
Cytogenetic Map	5	p15.2	NCBI
HuRef	5	10,426,064 - 10,449,280 (+)	NCBI		HuRef
CHM1_1	5	10,441,840 - 10,465,006 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	10,381,014 - 10,421,974 (+)	NCBI		T2T-CHM13v2.0

Ropn1l
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	31,441,356 - 31,453,835 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	31,441,357 - 31,453,883 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	31,441,210 - 31,453,689 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	31,441,211 - 31,453,737 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	31,370,965 - 31,383,444 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	31,385,802 - 31,398,236 (-)	NCBI		MGSCv36	mm8
Celera	15	32,132,478 - 32,144,251 (-)	NCBI		Celera
Cytogenetic Map	15	B2	NCBI
cM Map	15	12.94	NCBI

Ropn1l
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	84,153,529 - 84,164,216 (-)	NCBI		GRCr8
mRatBN7.2	2	82,442,645 - 82,453,332 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	82,441,891 - 82,453,485 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	89,482,648 - 89,493,409 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	87,604,232 - 87,614,987 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	82,660,510 - 82,671,269 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	84,520,421 - 84,531,192 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	84,520,421 - 84,531,342 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	104,193,712 - 104,204,276 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	83,530,855 - 83,542,250 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	2	77,966,073 - 77,977,625 (-)	NCBI		Celera
Cytogenetic Map	2	q23	NCBI

Ropn1l
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955426	285,278 - 296,828 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955426	285,053 - 296,913 (+)	NCBI	ChiLan1.0	ChiLan1.0

ROPN1L
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	10,685,380 - 10,725,228 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	8,839,170 - 8,878,840 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	10,757,032 - 10,795,787 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	10,614,565 - 10,652,558 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	10,614,565 - 10,635,705 (+)	Ensembl	panpan1.1		panPan2

Ropn1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	236,870,623 - 236,886,427 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936643	2,516,348 - 2,532,753 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936643	2,516,243 - 2,532,149 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ROPN1L
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	43,353 - 58,564 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	43,299 - 58,569 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

ROPN1L
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	9,978,369 - 9,999,007 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	9,978,409 - 9,999,009 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666064	18,547,512 - 18,571,543 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ropn1l
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624751	7,787,600 - 7,798,237 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624751	7,787,878 - 7,798,296 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in ROPN1L
295 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium										8	2
Low			18	6	5	6	3	1	12		7	6
Below cutoff	5	5	4		1		3	5			1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014110315	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038445492	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038445493	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038462888	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038519665	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038519666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038519667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038583323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038583324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038647724	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038647725	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_535790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000079	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000015907 ⟹ ENSCAFP00000014715

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	34	3,857,644 - 3,875,190 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000047846 ⟹ ENSCAFP00000036531

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	34	3,858,634 - 3,875,190 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000081319 ⟹ ENSCAFP00000053511

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	34	3,857,641 - 3,875,190 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845037381 ⟹ ENSCAFP00845029283

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	34	3,761,306 - 3,779,396 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845037456 ⟹ ENSCAFP00845029345

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	34	3,762,072 - 3,779,385 (-)	Ensembl

RefSeq Acc Id:

XM_038445492 ⟹ XP_038301420

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	34	3,762,134 - 3,779,520 (-)	NCBI

RefSeq Acc Id:

XM_038445493 ⟹ XP_038301421

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	34	3,762,071 - 3,779,519 (-)	NCBI

RefSeq Acc Id:

XM_038462888 ⟹ XP_038318816

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	34	8,360,363 - 8,377,693 (-)	NCBI

RefSeq Acc Id:

XM_038519665 ⟹ XP_038375593

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	34	3,816,306 - 3,823,219 (-)	NCBI

RefSeq Acc Id:

XM_038519666 ⟹ XP_038375594

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	34	3,812,045 - 3,829,384 (-)	NCBI

RefSeq Acc Id:

XM_038519667 ⟹ XP_038375595

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	34	3,811,982 - 3,829,384 (-)	NCBI

RefSeq Acc Id:

XM_038583323 ⟹ XP_038439251

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	34	4,021,434 - 4,038,833 (-)	NCBI

RefSeq Acc Id:

XM_038583324 ⟹ XP_038439252

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	34	4,021,371 - 4,038,832 (-)	NCBI

RefSeq Acc Id:

XM_038647724 ⟹ XP_038503652

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	34	3,790,543 - 3,807,895 (-)	NCBI

RefSeq Acc Id:

XM_038647725 ⟹ XP_038503653

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	34	3,790,480 - 3,807,895 (-)	NCBI

RefSeq Acc Id:

XM_535790 ⟹ XP_535790

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	34	3,857,643 - 3,875,058 (-)	NCBI
Dog10K_Boxer_Tasha	34	8,360,300 - 8,377,692 (-)	NCBI

Sequence:

show sequence

GCCGAGCCGAGCCGAGCCGAGGGGCGGGGCCCGCGGGCGTCCCGGTTGCCTGGATACTCCGCGA
AACAATCGCTGCCGCGGGCGCTTTCGGGCGGTCGCGGGGAGGGGCAGTTGGTCCTCACTTTCCG
CGGAGCCCCAGGAGCCCGAGGAGGAGCGGCCTGGTCCGGTCCGCGGAGAGCGATGCCGCTGCCC
GACACCATGTTCTGCGCGCAGCAGATCCAGATTCCGCCGGAGCTGCCGGACATCCTGAAGCAGT
TCACCAAGGCTGCGATCCGCACCCAGCCCGCCGATGTGCTGCAGTGGTCCGCGGGGTATTTTTC
AGCGTTGTCCAGAGGAGACCCACTTCCTGTCAAGGACAGAATCGAGATGCCCGTGGCCACGCAG
AAAACAGACACAGGCCTGACTCAAGGACTCCTGAAAGTCCTGCACAAGCAGTGTAGCCACAAGC
AGTATGTGGAATTAGCAGATCTTGAGCAGAAATGGAAAAATTTGTGCCTGCCAATAGAGAACTT
CAGGGCTCTGTTGCAGTTGGATCCTTGCGAAGACAAGATCGAGTGGATAAAATTTTTAGCGCTT
GGATGTAGCATGCTTGGTGGGTCACTGAACAGTTCGATGAAGCACCTGTGCGAGATCCTCACCA
CCGACCCCGAGGGCGGGCCTGCGCGCATCCCGTTTGAGACTTTCTCCTATGTTTACCGTTACTT
GTCCAGAATGGACTCGGACATACATGAAGTGGACACGGAGTCCTACCTTGCGACTTTAAAGGAC
ACTCTAGAATCTAGAAAGAATGGCATGATAGGACTTTCAGATTTCTTCGTTCTGACAAGGAAAG
TTTAGGAAACCTCGAGAAGAAAATTCAGAAGACAGAGGCCATTAATACAGAGGAGAATACTTTT
TAATGTCAAATAGTGCTTTTTAAAAGCTTGACACCAAATACAGCTTGTCTTTAACCACA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038301420	(Get FASTA)	NCBI Sequence Viewer
	XP_038301421	(Get FASTA)	NCBI Sequence Viewer
	XP_038318816	(Get FASTA)	NCBI Sequence Viewer
	XP_038375593	(Get FASTA)	NCBI Sequence Viewer
	XP_038375594	(Get FASTA)	NCBI Sequence Viewer
	XP_038375595	(Get FASTA)	NCBI Sequence Viewer
	XP_038439251	(Get FASTA)	NCBI Sequence Viewer
	XP_038439252	(Get FASTA)	NCBI Sequence Viewer
	XP_038503652	(Get FASTA)	NCBI Sequence Viewer
	XP_038503653	(Get FASTA)	NCBI Sequence Viewer
	XP_535790	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000014715.5
	ENSCAFP00000036531.2
	ENSCAFP00030021618.1
	ENSCAFP00040035617.1
	ENSCAFP00040035652.1
	ENSCAFP00845029283
	ENSCAFP00845029283.1
	ENSCAFP00845029345
	ENSCAFP00845029345.1

RefSeq Acc Id:	XP_535790 ⟸ XM_535790
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0TDN2 (UniProtKB/TrEMBL), A0A8I3PEU3 (UniProtKB/TrEMBL), A0A8C0N9M0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPLPDTMFCAQQIQIPPELPDILKQFTKAAIRTQPADVLQWSAGYFSALSRGDPLPVKDRIEMP VATQKTDTGLTQGLLKVLHKQCSHKQYVELADLEQKWKNLCLPIENFRALLQLDPCEDKIEWIK FLALGCSMLGGSLNSSMKHLCEILTTDPEGGPARIPFETFSYVYRYLSRMDSDIHEVDTESYLA TLKDTLESRKNGMIGLSDFFVLTRKV hide sequence

RefSeq Acc Id:

ENSCAFP00000014715 ⟸ ENSCAFT00000015907

RefSeq Acc Id:

ENSCAFP00000036531 ⟸ ENSCAFT00000047846

RefSeq Acc Id:

ENSCAFP00000053511 ⟸ ENSCAFT00000081319

RefSeq Acc Id:	XP_038375595 ⟸ XM_038519667
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038375594 ⟸ XM_038519666
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038375593 ⟸ XM_038519665
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038503653 ⟸ XM_038647725
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038503652 ⟸ XM_038647724
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038301421 ⟸ XM_038445493
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0TDN2 (UniProtKB/TrEMBL), A0A8I3PEU3 (UniProtKB/TrEMBL), A0A8C0N9M0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038301420 ⟸ XM_038445492
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LD57 (UniProtKB/TrEMBL), A0A8C0TFW7 (UniProtKB/TrEMBL), A0A8I3PEP7 (UniProtKB/TrEMBL), A0A8C0N9M0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038318816 ⟸ XM_038462888
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LD57 (UniProtKB/TrEMBL), A0A8C0TFW7 (UniProtKB/TrEMBL), A0A8I3PEP7 (UniProtKB/TrEMBL), A0A8C0N9M0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038439252 ⟸ XM_038583324
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0N9M0 (UniProtKB/TrEMBL), A0A8C0TDN2 (UniProtKB/TrEMBL), A0A8I3PEU3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038439251 ⟸ XM_038583323
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LD57 (UniProtKB/TrEMBL), A0A8C0N9M0 (UniProtKB/TrEMBL), A0A8C0TFW7 (UniProtKB/TrEMBL), A0A8I3PEP7 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845029283 ⟸ ENSCAFT00845037381

RefSeq Acc Id:

ENSCAFP00845029345 ⟸ ENSCAFT00845037456

Promoters

RGD ID:

13688855

Promoter ID:

EPDNEW_C6923

Type:

initiation region

Name:

ROPN1L_1

Description:

rhophilin associated tail protein 1 like

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	34	3,875,095 - 3,875,155	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000010002	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030013384	UniProtKB/TrEMBL
	ENSCAFG00040021999	UniProtKB/TrEMBL
	ENSCAFG00845021182	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000015907.5	UniProtKB/TrEMBL
	ENSCAFT00000047846.4	UniProtKB/TrEMBL
	ENSCAFT00030024753.1	UniProtKB/TrEMBL
	ENSCAFT00040040840.1	UniProtKB/TrEMBL
	ENSCAFT00040040883.1	UniProtKB/TrEMBL
	ENSCAFT00845037381	ENTREZGENE
	ENSCAFT00845037381.1	UniProtKB/TrEMBL
	ENSCAFT00845037456	ENTREZGENE
	ENSCAFT00845037456.1	UniProtKB/TrEMBL
Gene3D-CATH	cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain	UniProtKB/TrEMBL
InterPro	ROP_DD	UniProtKB/TrEMBL
NCBI Gene	ROPN1L	ENTREZGENE
PANTHER	ROPPORIN-1-LIKE PROTEIN	UniProtKB/TrEMBL
	ROPPORIN-1-LIKE PROTEIN	UniProtKB/TrEMBL
Superfamily-SCOP	Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit	UniProtKB/TrEMBL
UniProt	A0A8C0LD57	ENTREZGENE
	A0A8C0N9M0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TDN2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TFW7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PEP7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PEU3	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:45692	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar