CP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 23 | 43,969,297 - 44,033,226 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 23 | 43,969,435 - 44,030,369 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 23 | 43,833,488 - 43,897,430 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 23 | 44,595,848 - 44,659,908 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 23 | 44,595,850 - 44,657,211 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 23 | 44,184,564 - 44,247,918 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 23 | 44,232,408 - 44,296,498 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 23 | 44,486,640 - 44,550,551 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
CP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 3 | 149,162,414 - 149,221,829 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 149,162,410 - 149,221,829 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 148,880,201 - 148,939,616 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 150,373,220 - 150,422,519 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 150,374,073 - 150,422,277 | NCBI | | | | | Celera | 3 | 147,300,808 - 147,350,343 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q24-q25.1 | NCBI | | | | | HuRef | 3 | 146,251,480 - 146,311,114 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 148,843,270 - 148,902,904 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 151,913,150 - 151,972,585 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Cp (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 3 | 20,011,097 - 20,063,914 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 20,011,218 - 20,063,309 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 19,956,933 - 20,009,750 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 19,957,054 - 20,009,145 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 19,857,054 - 19,907,609 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 20,149,330 - 20,184,741 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 19,946,245 - 19,996,873 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | A2 | NCBI | | | | | cM Map | 3 | 6.1 | NCBI | | | | |
|
Cp (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 2 | 104,368,336 - 104,427,119 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 102,439,433 - 102,498,075 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 102,439,624 - 102,498,075 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 108,952,949 - 109,011,420 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 107,074,093 - 107,132,568 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 102,037,140 - 102,095,422 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 104,744,249 - 104,803,034 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 104,744,461 - 104,799,853 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 124,467,383 - 124,524,140 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 105,086,278 - 105,135,367 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 105,031,239 - 105,080,329 (+) | NCBI | | | | | Celera | 2 | 97,809,748 - 97,868,604 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | q24 | NCBI | | | | |
|
Cp (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955448 | 473,179 - 523,100 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955448 | 470,063 - 522,909 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
CP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 2 | 147,051,806 - 147,111,317 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 147,056,837 - 147,116,051 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 146,180,527 - 146,239,833 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 153,768,362 - 153,817,591 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 153,764,830 - 153,817,544 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
Cp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405602 | 83,263,259 - 83,302,817 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936519 | 6,431,144 - 6,481,858 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936519 | 6,431,156 - 6,473,183 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
CP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 13 | 89,396,708 - 89,463,476 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 89,396,713 - 89,463,540 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 97,390,612 - 97,455,765 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | | Pig Cytomap | 13 | q32-q33 | NCBI | | | | |
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Cp (Heterocephalus glaber - naked mole-rat) |
|