EHBP1L1 (EH domain binding protein 1 like 1) - Rat Genome Database

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Gene: EHBP1L1 (EH domain binding protein 1 like 1) Canis lupus familiaris
Analyze
Symbol: EHBP1L1
Name: EH domain binding protein 1 like 1
RGD ID: 12065746
Description: INVOLVED IN actin cytoskeleton organization (inferred); ASSOCIATED WITH Aicardi-Goutieres Syndrome 3 (ortholog); Bardet-Biedl syndrome (ortholog); genetic disease (ortholog); FOUND IN filamentous actin (inferred); microtubule organizing center (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: EH domain-binding protein 1-like protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11851,613,465 - 51,630,589 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1851,614,425 - 51,630,315 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1850,220,843 - 50,238,929 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01852,649,609 - 52,667,675 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1852,651,576 - 52,667,446 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11851,749,501 - 51,767,582 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01851,323,541 - 51,341,612 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01852,113,942 - 52,131,994 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:37756605  


Genomics

Comparative Map Data
EHBP1L1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11851,613,465 - 51,630,589 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1851,614,425 - 51,630,315 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1850,220,843 - 50,238,929 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01852,649,609 - 52,667,675 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1852,651,576 - 52,667,446 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11851,749,501 - 51,767,582 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01851,323,541 - 51,341,612 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01852,113,942 - 52,131,994 (-)NCBIUU_Cfam_GSD_1.0
EHBP1L1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381165,576,053 - 65,592,650 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1165,576,046 - 65,592,650 (+)EnsemblGRCh38hg38GRCh38
GRCh371165,343,524 - 65,360,121 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361165,100,085 - 65,116,692 (+)NCBINCBI36Build 36hg18NCBI36
Celera1162,670,174 - 62,686,826 (+)NCBICelera
Cytogenetic Map11q13.1NCBI
HuRef1161,670,490 - 61,687,082 (+)NCBIHuRef
CHM1_11165,227,406 - 65,244,013 (+)NCBICHM1_1
T2T-CHM13v2.01165,570,286 - 65,586,883 (+)NCBIT2T-CHM13v2.0
Ehbp1l1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39195,757,397 - 5,776,504 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl195,757,404 - 5,776,345 (-)EnsemblGRCm39 Ensembl
GRCm38195,707,369 - 5,726,576 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl195,707,376 - 5,726,317 (-)EnsemblGRCm38mm10GRCm38
MGSCv37195,707,369 - 5,726,317 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36195,708,049 - 5,726,270 (-)NCBIMGSCv36mm8
Celera195,577,419 - 5,596,367 (-)NCBICelera
Cytogenetic Map19ANCBI
cM Map194.34NCBI
Ehbp1l1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81212,423,444 - 212,444,357 (-)NCBIGRCr8
mRatBN7.21202,994,115 - 203,014,320 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1202,994,118 - 203,014,270 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1211,346,682 - 211,366,954 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01218,439,512 - 218,459,668 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01211,130,558 - 211,150,712 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01221,061,878 - 221,084,423 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1221,062,147 - 221,084,129 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01227,997,200 - 228,017,390 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41208,331,747 - 208,353,714 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1200,529,858 - 200,549,849 (-)NCBICelera
Cytogenetic Map1q43NCBI
Ehbp1l1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542219,670,778 - 19,689,008 (-)NCBIChiLan1.0ChiLan1.0
EHBP1L1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2966,805,762 - 66,822,356 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11167,848,529 - 67,865,112 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01160,935,156 - 60,951,756 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11164,272,237 - 64,286,297 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1164,273,027 - 64,285,950 (+)Ensemblpanpan1.1panPan2
Ehbp1l1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049477,424,836 - 7,440,368 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365993,867,005 - 3,882,732 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365993,867,185 - 3,882,712 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EHBP1L1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl26,662,463 - 6,678,888 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.126,662,460 - 6,678,721 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.225,865,120 - 5,881,490 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EHBP1L1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.118,648,318 - 8,664,990 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl18,648,641 - 8,664,759 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038105,943,058 - 105,959,722 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ehbp1l1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476720,800,254 - 20,821,165 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in EHBP1L1
178 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 12 6 6 6 7 10 6
Low 5 10 6 6 5 8
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005631476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005631477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005631478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005631479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038501246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038501247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038501248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038501250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038501251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038501252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038501253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038501254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038628054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038628055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038628056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038628057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038628058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038628059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038628060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038628062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005296663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005311783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005339861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005373625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005407686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000021355   ⟹   ENSCAFP00000019828
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1851,614,425 - 51,630,315 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845036666   ⟹   ENSCAFP00845028701
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1852,651,576 - 52,667,446 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845036850   ⟹   ENSCAFP00845028852
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1852,651,576 - 52,667,446 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845037003   ⟹   ENSCAFP00845028973
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1852,651,576 - 52,667,446 (-)Ensembl
RefSeq Acc Id: XM_005631476   ⟹   XP_005631533
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11851,614,040 - 51,630,587 (-)NCBI
Dog10K_Boxer_Tasha1850,222,431 - 50,238,926 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005631478   ⟹   XP_005631535
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11851,613,465 - 51,630,588 (-)NCBI
Dog10K_Boxer_Tasha1850,222,431 - 50,238,927 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005631479   ⟹   XP_005631536
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11851,613,465 - 51,630,589 (-)NCBI
Dog10K_Boxer_Tasha1850,222,431 - 50,238,928 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038424987   ⟹   XP_038280915
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01852,651,197 - 52,667,673 (-)NCBI
RefSeq Acc Id: XM_038424988   ⟹   XP_038280916
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01852,651,197 - 52,667,672 (-)NCBI
RefSeq Acc Id: XM_038424989   ⟹   XP_038280917
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01852,651,197 - 52,667,674 (-)NCBI
RefSeq Acc Id: XM_038424990   ⟹   XP_038280918
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01852,651,197 - 52,667,675 (-)NCBI
RefSeq Acc Id: XM_038424991   ⟹   XP_038280919
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01852,651,197 - 52,667,675 (-)NCBI
RefSeq Acc Id: XM_038424992   ⟹   XP_038280920
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01852,651,197 - 52,667,673 (-)NCBI
RefSeq Acc Id: XM_038424993   ⟹   XP_038280921
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01852,651,197 - 52,667,675 (-)NCBI
RefSeq Acc Id: XM_038424994   ⟹   XP_038280922
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01852,651,197 - 52,667,674 (-)NCBI
RefSeq Acc Id: XM_038454231   ⟹   XP_038310159
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1850,222,431 - 50,238,927 (-)NCBI
RefSeq Acc Id: XM_038454232   ⟹   XP_038310160
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1850,222,431 - 50,238,928 (-)NCBI
RefSeq Acc Id: XM_038454233   ⟹   XP_038310161
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1850,222,431 - 50,238,929 (-)NCBI
RefSeq Acc Id: XM_038454234   ⟹   XP_038310162
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1850,222,431 - 50,238,929 (-)NCBI
RefSeq Acc Id: XM_038454235   ⟹   XP_038310163
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1850,222,431 - 50,238,929 (-)NCBI
RefSeq Acc Id: XM_038501246   ⟹   XP_038357174
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11851,751,089 - 51,767,579 (-)NCBI
RefSeq Acc Id: XM_038501247   ⟹   XP_038357175
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11851,751,089 - 51,767,578 (-)NCBI
RefSeq Acc Id: XM_038501248   ⟹   XP_038357176
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11851,751,089 - 51,767,580 (-)NCBI
RefSeq Acc Id: XM_038501250   ⟹   XP_038357178
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11851,751,089 - 51,767,581 (-)NCBI
RefSeq Acc Id: XM_038501251   ⟹   XP_038357179
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11851,751,089 - 51,767,581 (-)NCBI
RefSeq Acc Id: XM_038501252   ⟹   XP_038357180
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11851,751,089 - 51,767,580 (-)NCBI
RefSeq Acc Id: XM_038501253   ⟹   XP_038357181
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11851,751,089 - 51,767,582 (-)NCBI
RefSeq Acc Id: XM_038501254   ⟹   XP_038357182
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11851,751,089 - 51,767,580 (-)NCBI
RefSeq Acc Id: XM_038563927   ⟹   XP_038419855
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01852,115,529 - 52,131,992 (-)NCBI
RefSeq Acc Id: XM_038563928   ⟹   XP_038419856
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01852,115,529 - 52,131,991 (-)NCBI
RefSeq Acc Id: XM_038563929   ⟹   XP_038419857
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01852,115,529 - 52,131,993 (-)NCBI
RefSeq Acc Id: XM_038563930   ⟹   XP_038419858
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01852,115,529 - 52,131,994 (-)NCBI
RefSeq Acc Id: XM_038563931   ⟹   XP_038419859
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01852,115,529 - 52,131,994 (-)NCBI
RefSeq Acc Id: XM_038563932   ⟹   XP_038419860
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01852,115,529 - 52,131,992 (-)NCBI
RefSeq Acc Id: XM_038563933   ⟹   XP_038419861
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01852,115,529 - 52,131,994 (-)NCBI
RefSeq Acc Id: XM_038563934   ⟹   XP_038419862
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01852,115,529 - 52,131,993 (-)NCBI
RefSeq Acc Id: XM_038628054   ⟹   XP_038483982
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01851,325,129 - 51,341,610 (-)NCBI
RefSeq Acc Id: XM_038628055   ⟹   XP_038483983
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01851,325,129 - 51,341,609 (-)NCBI
RefSeq Acc Id: XM_038628056   ⟹   XP_038483984
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01851,325,129 - 51,341,611 (-)NCBI
RefSeq Acc Id: XM_038628057   ⟹   XP_038483985
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01851,325,129 - 51,341,612 (-)NCBI
RefSeq Acc Id: XM_038628058   ⟹   XP_038483986
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01851,325,129 - 51,341,611 (-)NCBI
RefSeq Acc Id: XM_038628059   ⟹   XP_038483987
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01851,325,129 - 51,341,610 (-)NCBI
RefSeq Acc Id: XM_038628060   ⟹   XP_038483988
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01851,325,129 - 51,341,612 (-)NCBI
RefSeq Acc Id: XM_038628062   ⟹   XP_038483990
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01851,325,129 - 51,341,611 (-)NCBI
RefSeq Acc Id: XR_005296663
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01852,649,609 - 52,667,673 (-)NCBI
RefSeq Acc Id: XR_005311783
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1850,220,843 - 50,238,927 (-)NCBI
RefSeq Acc Id: XR_005339861
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11851,749,501 - 51,767,579 (-)NCBI
RefSeq Acc Id: XR_005373625
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01852,113,942 - 52,131,992 (-)NCBI
RefSeq Acc Id: XR_005407686
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01851,323,541 - 51,341,610 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005631533 (Get FASTA)   NCBI Sequence Viewer  
  XP_005631535 (Get FASTA)   NCBI Sequence Viewer  
  XP_005631536 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280915 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280916 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280917 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280918 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280919 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280920 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280921 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280922 (Get FASTA)   NCBI Sequence Viewer  
  XP_038310159 (Get FASTA)   NCBI Sequence Viewer  
  XP_038310160 (Get FASTA)   NCBI Sequence Viewer  
  XP_038310161 (Get FASTA)   NCBI Sequence Viewer  
  XP_038310162 (Get FASTA)   NCBI Sequence Viewer  
  XP_038310163 (Get FASTA)   NCBI Sequence Viewer  
  XP_038357174 (Get FASTA)   NCBI Sequence Viewer  
  XP_038357175 (Get FASTA)   NCBI Sequence Viewer  
  XP_038357176 (Get FASTA)   NCBI Sequence Viewer  
  XP_038357178 (Get FASTA)   NCBI Sequence Viewer  
  XP_038357179 (Get FASTA)   NCBI Sequence Viewer  
  XP_038357180 (Get FASTA)   NCBI Sequence Viewer  
  XP_038357181 (Get FASTA)   NCBI Sequence Viewer  
  XP_038357182 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419855 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419856 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419857 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419858 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419859 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419860 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419861 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419862 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483982 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483983 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483984 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483985 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483986 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483987 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483988 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483990 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000019828.6
  ENSCAFP00000073934.1
  ENSCAFP00000075240.1
  ENSCAFP00845028701
  ENSCAFP00845028701.1
  ENSCAFP00845028852
  ENSCAFP00845028852.1
  ENSCAFP00845028973.1
Reference Protein Sequences
RefSeq Acc Id: XP_005631533   ⟸   XM_005631476
- Peptide Label: isoform X2
- UniProtKB: A0A8I3PJ88 (UniProtKB/TrEMBL),   A0A8P0SI00 (UniProtKB/TrEMBL),   A0A8I3S4N4 (UniProtKB/TrEMBL),   A0A8P0PS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005631535   ⟸   XM_005631478
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_005631536   ⟸   XM_005631479
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: ENSCAFP00000019828   ⟸   ENSCAFT00000021355
RefSeq Acc Id: XP_038357181   ⟸   XM_038501253
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038357179   ⟸   XM_038501251
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038357178   ⟸   XM_038501250
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038357182   ⟸   XM_038501254
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038357180   ⟸   XM_038501252
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038357176   ⟸   XM_038501248
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038357174   ⟸   XM_038501246
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038357175   ⟸   XM_038501247
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038483988   ⟸   XM_038628060
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038483985   ⟸   XM_038628057
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038483990   ⟸   XM_038628062
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038483986   ⟸   XM_038628058
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038483984   ⟸   XM_038628056
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038483987   ⟸   XM_038628059
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038483982   ⟸   XM_038628054
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038483983   ⟸   XM_038628055
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038280921   ⟸   XM_038424993
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038280919   ⟸   XM_038424991
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038280918   ⟸   XM_038424990
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038280922   ⟸   XM_038424994
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038280917   ⟸   XM_038424989
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038280920   ⟸   XM_038424992
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038280915   ⟸   XM_038424987
- Peptide Label: isoform X1
- UniProtKB: A0A8I3PL05 (UniProtKB/TrEMBL),   A0A8P0PPV5 (UniProtKB/TrEMBL),   A0A8I3S4N4 (UniProtKB/TrEMBL),   A0A8P0PS14 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280916   ⟸   XM_038424988
- Peptide Label: isoform X2
- UniProtKB: A0A8I3PJ88 (UniProtKB/TrEMBL),   A0A8P0SI00 (UniProtKB/TrEMBL),   A0A8I3S4N4 (UniProtKB/TrEMBL),   A0A8P0PS14 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038310163   ⟸   XM_038454235
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038310162   ⟸   XM_038454234
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038310161   ⟸   XM_038454233
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038310160   ⟸   XM_038454232
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038310159   ⟸   XM_038454231
- Peptide Label: isoform X1
- UniProtKB: A0A8I3PL05 (UniProtKB/TrEMBL),   A0A8P0PPV5 (UniProtKB/TrEMBL),   A0A8I3S4N4 (UniProtKB/TrEMBL),   A0A8P0PS14 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419861   ⟸   XM_038563933
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038419859   ⟸   XM_038563931
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038419858   ⟸   XM_038563930
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038419862   ⟸   XM_038563934
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038419857   ⟸   XM_038563929
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038419860   ⟸   XM_038563932
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038419855   ⟸   XM_038563927
- Peptide Label: isoform X1
- UniProtKB: A0A8I3PL05 (UniProtKB/TrEMBL),   A0A8I3S4N4 (UniProtKB/TrEMBL),   A0A8P0PPV5 (UniProtKB/TrEMBL),   A0A8P0PS14 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419856   ⟸   XM_038563928
- Peptide Label: isoform X2
- UniProtKB: A0A8I3PJ88 (UniProtKB/TrEMBL),   A0A8I3S4N4 (UniProtKB/TrEMBL),   A0A8P0PS14 (UniProtKB/TrEMBL),   A0A8P0SI00 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845028973   ⟸   ENSCAFT00845037003
RefSeq Acc Id: ENSCAFP00845028852   ⟸   ENSCAFT00845036850
RefSeq Acc Id: ENSCAFP00845028701   ⟸   ENSCAFT00845036666
Protein Domains
bMERB   C2 NT-type   Calponin-homology (CH)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000013463 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00845020691 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000021355.7 UniProtKB/TrEMBL
  ENSCAFT00000101106.1 UniProtKB/TrEMBL
  ENSCAFT00000109846.1 UniProtKB/TrEMBL
  ENSCAFT00845036666 ENTREZGENE
  ENSCAFT00845036666.1 UniProtKB/TrEMBL
  ENSCAFT00845036850 ENTREZGENE
  ENSCAFT00845036850.1 UniProtKB/TrEMBL
  ENSCAFT00845037003.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.418.10 UniProtKB/TrEMBL
InterPro bMERB_dom UniProtKB/TrEMBL
  CH-domain UniProtKB/TrEMBL
  CH_dom_sf UniProtKB/TrEMBL
  NT-C2 UniProtKB/TrEMBL
KEGG Report cfa:483734 UniProtKB/TrEMBL
NCBI Gene EHBP1L1 ENTREZGENE
PANTHER CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED UniProtKB/TrEMBL
  PTHR23167:SF42 UniProtKB/TrEMBL
Pfam DUF3585 UniProtKB/TrEMBL
  NT-C2 UniProtKB/TrEMBL
  PF00307 UniProtKB/TrEMBL
PROSITE BMERB UniProtKB/TrEMBL
  C2_NT UniProtKB/TrEMBL
  PS50021 UniProtKB/TrEMBL
SMART DUF3585 UniProtKB/TrEMBL
  SM00033 UniProtKB/TrEMBL
Superfamily-SCOP SSF47576 UniProtKB/TrEMBL
UniProt A0A8I3PJ88 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PL05 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3S4N4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PPV5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PS14 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SI00 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:40245 ENTREZGENE