CFI (complement factor I) - Rat Genome Database

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Gene: CFI (complement factor I) Canis lupus familiaris
Analyze
Symbol: CFI
Name: complement factor I
RGD ID: 12065662
Description: ENCODES a protein that exhibits hydrolase activity (inferred); peptidase activity (inferred); serine-type endopeptidase activity (inferred); INVOLVED IN cellular response to interleukin-6 (ortholog); ASSOCIATED WITH age related macular degeneration 13 (ortholog); atypical hemolytic-uremic syndrome (ortholog); chronic kidney disease (ortholog); FOUND IN extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC102153547; uncharacterized LOC102153547
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13229,936,447 - 29,986,755 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3229,936,393 - 29,985,724 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3212,034,262 - 12,093,545 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03230,155,997 - 30,216,527 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3230,155,943 - 30,206,594 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13230,150,126 - 30,210,801 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03229,894,695 - 29,953,963 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0329,895,138 - 9,954,756 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:19423168   PMID:22301074  


Genomics

Comparative Map Data
CFI
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13229,936,447 - 29,986,755 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3229,936,393 - 29,985,724 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3212,034,262 - 12,093,545 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03230,155,997 - 30,216,527 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3230,155,943 - 30,206,594 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13230,150,126 - 30,210,801 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03229,894,695 - 29,953,963 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0329,895,138 - 9,954,756 (+)NCBIUU_Cfam_GSD_1.0
CFI
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384109,730,982 - 109,801,999 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4109,731,008 - 109,802,150 (-)EnsemblGRCh38hg38GRCh38
GRCh374110,652,138 - 110,723,155 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364110,881,297 - 110,942,783 (-)NCBINCBI36Build 36hg18NCBI36
Build 344111,019,455 - 111,080,745NCBI
Celera4107,955,508 - 108,016,895 (-)NCBICelera
Cytogenetic Map4q25NCBI
HuRef4106,394,822 - 106,455,453 (-)NCBIHuRef
CHM1_14110,638,387 - 110,699,796 (-)NCBICHM1_1
T2T-CHM13v2.04113,031,939 - 113,104,052 (-)NCBIT2T-CHM13v2.0
Cfi
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393129,630,432 - 129,668,978 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3129,629,533 - 129,668,981 (+)EnsemblGRCm39 Ensembl
GRCm383129,836,727 - 129,875,332 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3129,835,884 - 129,875,332 (+)EnsemblGRCm38mm10GRCm38
MGSCv373129,539,657 - 129,578,246 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363129,828,759 - 129,867,354 (+)NCBIMGSCv36mm8
Celera3136,349,476 - 136,389,693 (+)NCBICelera
Cytogenetic Map3G3NCBI
cM Map359.21NCBI
Cfi
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82221,062,206 - 221,104,790 (+)NCBIGRCr8
mRatBN7.22218,389,079 - 218,430,565 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2218,387,990 - 218,430,561 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2226,074,156 - 226,108,943 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02223,973,845 - 224,008,640 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02218,831,494 - 218,866,282 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02235,264,149 - 235,305,779 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2235,264,219 - 235,305,781 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0274,628,922 - 74,659,423 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42227,281,621 - 227,325,109 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12227,268,300 - 227,311,787 (+)NCBI
Celera2210,674,292 - 210,712,800 (+)NCBICelera
Cytogenetic Map2q43NCBI
Cfi
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955496492,167 - 553,217 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955496492,217 - 553,398 (+)NCBIChiLan1.0ChiLan1.0
CFI
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23107,831,937 - 107,906,418 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14108,125,471 - 108,199,833 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04102,236,868 - 102,311,359 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14112,804,645 - 112,865,581 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4112,804,645 - 112,865,581 (-)Ensemblpanpan1.1panPan2
Cfi
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530110,952,721 - 10,990,319 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936563960,883 - 988,634 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936563960,883 - 998,136 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CFI
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8112,433,633 - 112,470,832 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18112,430,824 - 112,470,844 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28120,517,180 - 120,554,319 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CFI
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1757,641,363 - 57,713,209 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl757,640,141 - 57,700,805 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603736,292,740 - 36,365,937 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cfi
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624830111,004 - 151,514 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624830111,123 - 151,668 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CFI
878 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 22 6 6 6 6 6 12 8 10 6
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005639268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014109975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022413718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022413719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038444362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038444363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038444364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038444365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038518749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038518750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038518751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038518752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038581904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038581905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038581906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038581907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038646696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038646697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038646698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038646700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000018207   ⟹   ENSCAFP00000016859
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3229,936,458 - 29,985,697 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000018226   ⟹   ENSCAFP00000016878
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3229,936,458 - 29,985,697 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000065342   ⟹   ENSCAFP00000049062
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3229,936,458 - 29,985,724 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000082601   ⟹   ENSCAFP00000049779
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3229,936,393 - 29,985,696 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845053129   ⟹   ENSCAFP00845041720
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3230,155,943 - 30,206,594 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845053146   ⟹   ENSCAFP00845041731
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3230,155,997 - 30,206,589 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845053171   ⟹   ENSCAFP00845041745
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3230,156,115 - 30,206,594 (-)Ensembl
RefSeq Acc Id: XM_005639268   ⟹   XP_005639325
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13229,936,447 - 29,985,837 (-)NCBI
Dog10K_Boxer_Tasha3212,044,162 - 12,093,545 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014109975   ⟹   XP_013965450
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13229,936,447 - 29,985,838 (-)NCBI
Dog10K_Boxer_Tasha3212,044,162 - 12,093,545 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038444362   ⟹   XP_038300290
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03230,155,997 - 30,206,645 (-)NCBI
RefSeq Acc Id: XM_038444363   ⟹   XP_038300291
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03230,155,997 - 30,206,645 (-)NCBI
RefSeq Acc Id: XM_038444364   ⟹   XP_038300292
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03230,155,997 - 30,206,645 (-)NCBI
RefSeq Acc Id: XM_038444365   ⟹   XP_038300293
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03230,155,997 - 30,216,527 (-)NCBI
RefSeq Acc Id: XM_038462005   ⟹   XP_038317933
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3212,044,162 - 12,093,545 (+)NCBI
RefSeq Acc Id: XM_038462007   ⟹   XP_038317935
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3212,034,262 - 12,093,545 (+)NCBI
RefSeq Acc Id: XM_038518749   ⟹   XP_038374677
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13230,150,126 - 30,200,929 (-)NCBI
RefSeq Acc Id: XM_038518750   ⟹   XP_038374678
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13230,150,126 - 30,200,929 (-)NCBI
RefSeq Acc Id: XM_038518751   ⟹   XP_038374679
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13230,150,126 - 30,200,929 (-)NCBI
RefSeq Acc Id: XM_038518752   ⟹   XP_038374680
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13230,150,126 - 30,210,801 (-)NCBI
RefSeq Acc Id: XM_038581904   ⟹   XP_038437832
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0329,905,030 - 9,954,756 (+)NCBI
RefSeq Acc Id: XM_038581905   ⟹   XP_038437833
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0329,905,030 - 9,954,756 (+)NCBI
RefSeq Acc Id: XM_038581906   ⟹   XP_038437834
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0329,905,030 - 9,954,756 (+)NCBI
RefSeq Acc Id: XM_038581907   ⟹   XP_038437835
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0329,895,138 - 9,954,756 (+)NCBI
RefSeq Acc Id: XM_038646696   ⟹   XP_038502624
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03229,894,695 - 29,944,081 (-)NCBI
RefSeq Acc Id: XM_038646697   ⟹   XP_038502625
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03229,894,695 - 29,944,081 (-)NCBI
RefSeq Acc Id: XM_038646698   ⟹   XP_038502626
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03229,894,695 - 29,944,081 (-)NCBI
RefSeq Acc Id: XM_038646700   ⟹   XP_038502628
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03229,894,695 - 29,953,963 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005639325 (Get FASTA)   NCBI Sequence Viewer  
  XP_013965450 (Get FASTA)   NCBI Sequence Viewer  
  XP_038300290 (Get FASTA)   NCBI Sequence Viewer  
  XP_038300291 (Get FASTA)   NCBI Sequence Viewer  
  XP_038300292 (Get FASTA)   NCBI Sequence Viewer  
  XP_038300293 (Get FASTA)   NCBI Sequence Viewer  
  XP_038317933 (Get FASTA)   NCBI Sequence Viewer  
  XP_038317935 (Get FASTA)   NCBI Sequence Viewer  
  XP_038374677 (Get FASTA)   NCBI Sequence Viewer  
  XP_038374678 (Get FASTA)   NCBI Sequence Viewer  
  XP_038374679 (Get FASTA)   NCBI Sequence Viewer  
  XP_038374680 (Get FASTA)   NCBI Sequence Viewer  
  XP_038437832 (Get FASTA)   NCBI Sequence Viewer  
  XP_038437833 (Get FASTA)   NCBI Sequence Viewer  
  XP_038437834 (Get FASTA)   NCBI Sequence Viewer  
  XP_038437835 (Get FASTA)   NCBI Sequence Viewer  
  XP_038502624 (Get FASTA)   NCBI Sequence Viewer  
  XP_038502625 (Get FASTA)   NCBI Sequence Viewer  
  XP_038502626 (Get FASTA)   NCBI Sequence Viewer  
  XP_038502628 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000016859.5
  ENSCAFP00000016878.5
  ENSCAFP00000049779.1
  ENSCAFP00030037804.1
  ENSCAFP00030037839.1
  ENSCAFP00030037892.1
  ENSCAFP00030038019.1
  ENSCAFP00040038833.1
  ENSCAFP00040038948.1
  ENSCAFP00040038983.1
  ENSCAFP00040039000.1
  ENSCAFP00845041720.1
  ENSCAFP00845041731
  ENSCAFP00845041731.1
  ENSCAFP00845041745
  ENSCAFP00845041745.1
RefSeq Acc Id: XP_013965450   ⟸   XM_014109975
- Peptide Label: isoform X3
- UniProtKB: A0A8C0TQM2 (UniProtKB/TrEMBL),   A0A8I3Q576 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005639325   ⟸   XM_005639268
- Peptide Label: isoform X1
- UniProtKB: A0A8C0P9Q5 (UniProtKB/TrEMBL),   A0A8P0SG74 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000049779   ⟸   ENSCAFT00000082601
RefSeq Acc Id: ENSCAFP00000016859   ⟸   ENSCAFT00000018207
RefSeq Acc Id: ENSCAFP00000016878   ⟸   ENSCAFT00000018226
RefSeq Acc Id: ENSCAFP00000049062   ⟸   ENSCAFT00000065342
RefSeq Acc Id: XP_038374680   ⟸   XM_038518752
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038374679   ⟸   XM_038518751
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038374678   ⟸   XM_038518750
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038374677   ⟸   XM_038518749
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038502628   ⟸   XM_038646700
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038502626   ⟸   XM_038646698
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038502625   ⟸   XM_038646697
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038502624   ⟸   XM_038646696
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038300293   ⟸   XM_038444365
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038300292   ⟸   XM_038444364
- Peptide Label: isoform X3
- UniProtKB: A0A8C0KNL6 (UniProtKB/TrEMBL),   A0A8C0TQM2 (UniProtKB/TrEMBL),   A0A8I3Q576 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038300291   ⟸   XM_038444363
- Peptide Label: isoform X2
- UniProtKB: A0A8C0KSF2 (UniProtKB/TrEMBL),   A0A8P0NDB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038300290   ⟸   XM_038444362
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KS82 (UniProtKB/TrEMBL),   A0A8C0TL81 (UniProtKB/TrEMBL),   A0A8I3Q318 (UniProtKB/TrEMBL),   A0A8P0SG74 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038317935   ⟸   XM_038462007
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038317933   ⟸   XM_038462005
- Peptide Label: isoform X2
- UniProtKB: A0A8C0P738 (UniProtKB/TrEMBL),   A0A8P0NDB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038437835   ⟸   XM_038581907
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038437832   ⟸   XM_038581904
- Peptide Label: isoform X1
- UniProtKB: A0A8C0P9Q5 (UniProtKB/TrEMBL),   A0A8P0SG74 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038437833   ⟸   XM_038581905
- Peptide Label: isoform X2
- UniProtKB: A0A8C0P738 (UniProtKB/TrEMBL),   A0A8P0NDB3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038437834   ⟸   XM_038581906
- Peptide Label: isoform X3
- UniProtKB: A0A8C0TQM2 (UniProtKB/TrEMBL),   A0A8I3Q576 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845041731   ⟸   ENSCAFT00845053146
RefSeq Acc Id: ENSCAFP00845041720   ⟸   ENSCAFT00845053129
RefSeq Acc Id: ENSCAFP00845041745   ⟸   ENSCAFT00845053171
Protein Domains
Kazal-like   Peptidase S1   SRCR

Promoters
RGD ID:13688752
Promoter ID:EPDNEW_C6818
Type:initiation region
Name:CFI_2
Description:complement factor I
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_C6819  
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13229,929,755 - 29,929,815EPDNEW
RGD ID:13688751
Promoter ID:EPDNEW_C6819
Type:initiation region
Name:CFI_1
Description:complement factor I
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_C6818  
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13229,985,709 - 29,985,769EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000011462 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030023378 UniProtKB/TrEMBL
  ENSCAFG00040023738 UniProtKB/TrEMBL
  ENSCAFG00845029982 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000018207.5 UniProtKB/TrEMBL
  ENSCAFT00000018226.6 UniProtKB/TrEMBL
  ENSCAFT00000082601.2 UniProtKB/TrEMBL
  ENSCAFT00030043317.1 UniProtKB/TrEMBL
  ENSCAFT00030043352.1 UniProtKB/TrEMBL
  ENSCAFT00030043406.1 UniProtKB/TrEMBL
  ENSCAFT00030043551.1 UniProtKB/TrEMBL
  ENSCAFT00040044471.1 UniProtKB/TrEMBL
  ENSCAFT00040044594.1 UniProtKB/TrEMBL
  ENSCAFT00040044629.1 UniProtKB/TrEMBL
  ENSCAFT00040044648.1 UniProtKB/TrEMBL
  ENSCAFT00845053129.1 UniProtKB/TrEMBL
  ENSCAFT00845053146 ENTREZGENE
  ENSCAFT00845053146.1 UniProtKB/TrEMBL
  ENSCAFT00845053171 ENTREZGENE
  ENSCAFT00845053171.1 UniProtKB/TrEMBL
Gene3D-CATH 2.40.10.10 UniProtKB/TrEMBL
  3.10.250.10 UniProtKB/TrEMBL
  3.30.60.30 UniProtKB/TrEMBL
  4.10.400.10 UniProtKB/TrEMBL
InterPro CFAI_FIMAC_N UniProtKB/TrEMBL
  CFAI_KAZAL UniProtKB/TrEMBL
  FacI_MAC UniProtKB/TrEMBL
  Kazal_dom UniProtKB/TrEMBL
  Kazal_dom_sf UniProtKB/TrEMBL
  LDL_receptor-like_sf UniProtKB/TrEMBL
  LDLR_class-A_CS UniProtKB/TrEMBL
  LDrepeatLR_classA_rpt UniProtKB/TrEMBL
  Peptidase_S1_PA UniProtKB/TrEMBL
  Peptidase_S1_PA_chymotrypsin UniProtKB/TrEMBL
  Peptidase_S1A UniProtKB/TrEMBL
  SRCR UniProtKB/TrEMBL
  SRCR-like_dom UniProtKB/TrEMBL
  SRCR-like_dom_sf UniProtKB/TrEMBL
  Trypsin_dom UniProtKB/TrEMBL
  TRYPSIN_HIS UniProtKB/TrEMBL
  TRYPSIN_SER UniProtKB/TrEMBL
KEGG Report cfa:478515 UniProtKB/TrEMBL
NCBI Gene CFI ENTREZGENE
PANTHER ACROSIN-RELATED UniProtKB/TrEMBL
  CUB AND LDLA DOMAIN, ISOFORM A-RELATED UniProtKB/TrEMBL
  HYALIN UniProtKB/TrEMBL
  LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED UniProtKB/TrEMBL
Pfam CFAI_FIMAC_N UniProtKB/TrEMBL
  CFAI_KAZAL UniProtKB/TrEMBL
  Ldl_recept_a UniProtKB/TrEMBL
  SRCR UniProtKB/TrEMBL
  Trypsin UniProtKB/TrEMBL
PRINTS CHYMOTRYPSIN UniProtKB/TrEMBL
  LDLRECEPTOR UniProtKB/TrEMBL
PROSITE KAZAL_2 UniProtKB/TrEMBL
  LDLRA_1 UniProtKB/TrEMBL
  LDLRA_2 UniProtKB/TrEMBL
  SRCR_2 UniProtKB/TrEMBL
  TRYPSIN_DOM UniProtKB/TrEMBL
  TRYPSIN_HIS UniProtKB/TrEMBL
  TRYPSIN_SER UniProtKB/TrEMBL
SMART FIMAC UniProtKB/TrEMBL
  LDLa UniProtKB/TrEMBL
  SM00202 UniProtKB/TrEMBL
  Tryp_SPc UniProtKB/TrEMBL
Superfamily-SCOP SSF100895 UniProtKB/TrEMBL
  SSF50494 UniProtKB/TrEMBL
  SSF56487 UniProtKB/TrEMBL
  SSF57424 UniProtKB/TrEMBL
UniProt A0A8C0KNL6 ENTREZGENE
  A0A8C0KS82 ENTREZGENE
  A0A8C0KSF2 ENTREZGENE
  A0A8C0P738 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0P9Q5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RRZ4_CANLF UniProtKB/TrEMBL
  A0A8C0TL81 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TLI3_CANLF UniProtKB/TrEMBL
  A0A8C0TQM2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0Z5U0_CANLF UniProtKB/TrEMBL
  A0A8I3Q318 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3Q576 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3Q960_CANLF UniProtKB/TrEMBL
  A0A8P0NDB3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SG74 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:39176 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-14 CFI  complement factor I  LOC102153547  uncharacterized LOC102153547  Data merged from RGD:12200855 737654 PROVISIONAL