MME (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 23 | 48,966,222 - 49,059,919 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 23 | 48,971,066 - 49,059,919 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 23 | 48,843,474 - 48,934,858 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 23 | 49,596,559 - 49,692,908 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 23 | 49,593,076 - 49,694,136 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 23 | 49,187,708 - 49,279,020 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 23 | 49,238,095 - 49,328,993 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 23 | 49,521,230 - 49,612,145 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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MME (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 3 | 155,024,202 - 155,183,729 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 155,024,124 - 155,183,704 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 154,741,991 - 154,901,518 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 156,280,130 - 156,384,212 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 156,280,756 - 156,384,194 | NCBI | | | | | Celera | 3 | 153,217,556 - 153,321,523 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q25.2 | NCBI | | | | | HuRef | 3 | 152,191,860 - 152,295,862 (+) | NCBI | | HuRef | | | CHM1_1 | 3 | 154,760,481 - 154,864,540 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 157,798,155 - 157,957,709 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Mme (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 3 | 63,202,632 - 63,291,134 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 63,148,958 - 63,293,451 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 63,295,211 - 63,383,713 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 63,241,537 - 63,386,030 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 63,099,794 - 63,186,153 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 63,383,801 - 63,470,160 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 62,969,256 - 63,055,608 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | E1 | NCBI | | | | | cM Map | 3 | 29.97 | NCBI | | | | |
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Mme (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 2 | 149,806,826 - 149,957,381 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 147,686,913 - 147,803,808 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 147,722,086 - 147,803,792 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 154,412,545 - 154,499,268 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 152,461,414 - 152,548,760 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 147,094,065 - 147,181,452 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 153,799,203 - 153,880,910 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 153,803,349 - 153,880,738 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 173,193,501 - 173,278,946 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 153,031,724 - 153,114,515 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 152,981,686 - 153,064,477 (+) | NCBI | | | | | Celera | 2 | 142,009,686 - 142,090,693 (+) | NCBI | | Celera | | | RH 3.4 Map | 2 | 955.0 | RGD | | | | | Cytogenetic Map | 2 | q31 | NCBI | | | | |
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Mme (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955448 | 6,226,059 - 6,314,949 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955448 | 6,193,113 - 6,311,666 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MME (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 2 | 152,997,962 - 153,099,218 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 152,949,064 - 153,103,948 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 152,085,694 - 152,240,148 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 159,637,965 - 160,292,119 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 160,197,566 - 160,292,119 (+) | Ensembl | panpan1.1 | | panPan2 | |
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Mme (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405602 | 87,138,054 - 87,220,087 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936519 | 2,513,704 - 2,595,971 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936519 | 2,513,896 - 2,595,896 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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MME (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 13 | 95,019,081 - 95,126,045 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 95,018,395 - 95,122,977 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 103,025,551 - 103,128,284 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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MME (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 15 | 35,577,460 - 35,681,730 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 15 | 35,580,714 - 35,633,914 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 8,227,922 - 8,338,216 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Mme (Heterocephalus glaber - naked mole-rat) |
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