ANKRD6 (ankyrin repeat domain 6) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: ANKRD6 (ankyrin repeat domain 6) Canis lupus familiaris
Analyze
Symbol: ANKRD6
Name: ankyrin repeat domain 6
RGD ID: 12062644
Description: ENCODES a protein that exhibits chloroplast targeting sequence binding (inferred); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); positive regulation of Wnt signaling pathway, planar cell polarity pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (inferred); intracellular membrane-bounded organelle (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ankyrin repeat domain-containing protein 6
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11248,646,173 - 48,844,231 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1248,646,173 - 48,842,451 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1248,453,031 - 48,650,863 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01249,455,055 - 49,652,998 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1249,455,072 - 49,651,210 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11248,771,322 - 48,968,238 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01248,671,428 - 48,869,392 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01248,863,886 - 49,061,782 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
ANKRD6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11248,646,173 - 48,844,231 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1248,646,173 - 48,842,451 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1248,453,031 - 48,650,863 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01249,455,055 - 49,652,998 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1249,455,072 - 49,651,210 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11248,771,322 - 48,968,238 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01248,671,428 - 48,869,392 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01248,863,886 - 49,061,782 (+)NCBIUU_Cfam_GSD_1.0
ANKRD6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38689,433,152 - 89,633,834 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl689,433,152 - 89,633,834 (+)EnsemblGRCh38hg38GRCh38
GRCh37690,142,871 - 90,343,553 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36690,199,616 - 90,400,124 (+)NCBINCBI36Build 36hg18NCBI36
Build 34690,199,650 - 90,397,935NCBI
Celera690,561,418 - 90,762,379 (+)NCBICelera
Cytogenetic Map6q15NCBI
HuRef687,360,022 - 87,560,501 (+)NCBIHuRef
CHM1_1690,240,543 - 90,441,151 (+)NCBICHM1_1
T2T-CHM13v2.0690,642,513 - 90,843,208 (+)NCBIT2T-CHM13v2.0
Ankrd6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39432,804,027 - 32,950,884 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl432,804,035 - 32,950,841 (-)EnsemblGRCm39 Ensembl
GRCm38432,804,027 - 32,950,885 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl432,804,035 - 32,950,841 (-)EnsemblGRCm38mm10GRCm38
MGSCv37432,891,010 - 33,037,801 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36433,132,648 - 33,279,439 (-)NCBIMGSCv36mm8
Celera432,543,432 - 32,691,408 (-)NCBICelera
Cytogenetic Map4A5NCBI
cM Map414.42NCBI
Ankrd6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8551,999,225 - 52,139,623 (-)NCBIGRCr8
mRatBN7.2547,197,981 - 47,343,183 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl547,202,873 - 47,343,090 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx549,344,727 - 49,455,057 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0550,943,885 - 51,054,241 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0550,889,350 - 51,000,727 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0548,052,610 - 48,167,568 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl548,052,401 - 48,194,294 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0552,640,128 - 52,778,289 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4549,098,952 - 49,211,771 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera545,962,187 - 46,073,919 (-)NCBICelera
Cytogenetic Map5q21NCBI
Ankrd6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541116,214,094 - 16,360,573 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541116,206,819 - 16,358,322 (+)NCBIChiLan1.0ChiLan1.0
ANKRD6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25109,643,051 - 109,714,379 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16107,543,901 - 107,615,223 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0687,306,496 - 87,509,352 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1690,631,672 - 90,782,762 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl690,710,411 - 90,782,762 (+)Ensemblpanpan1.1panPan2
Ankrd6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494683,718,038 - 83,857,904 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365102,611,290 - 2,752,843 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365102,612,492 - 2,665,063 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKRD6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl157,438,000 - 57,645,957 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1157,437,947 - 57,648,262 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2164,482,282 - 64,551,241 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANKRD6
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11314,187,531 - 14,392,800 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1314,321,797 - 14,389,917 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040190,504,832 - 190,709,462 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ankrd6
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247994,534,668 - 4,598,814 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247994,532,071 - 4,598,874 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ANKRD6
2332 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 16 1 6 10
Low 5 6 5 6 8 5
Below cutoff 5 6 6 6 6 1

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005627631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005627633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038492430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_848749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000004982   ⟹   ENSCAFP00000004620
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1248,646,173 - 48,842,451 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000061759   ⟹   ENSCAFP00000060941
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1248,646,173 - 48,842,451 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000067645   ⟹   ENSCAFP00000044094
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1248,646,173 - 48,842,451 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000075049   ⟹   ENSCAFP00000058735
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1248,646,173 - 48,841,753 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000076748   ⟹   ENSCAFP00000048365
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1248,646,173 - 48,821,016 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000083438   ⟹   ENSCAFP00000064929
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1248,646,173 - 48,842,451 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845012297   ⟹   ENSCAFP00845009611
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1249,455,072 - 49,651,210 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845012386   ⟹   ENSCAFP00845009681
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1249,455,072 - 49,651,210 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845012437   ⟹   ENSCAFP00845009721
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1249,455,072 - 49,650,521 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845012460   ⟹   ENSCAFP00845009736
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1249,455,072 - 49,629,963 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845012481   ⟹   ENSCAFP00845009751
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1249,455,138 - 49,650,639 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845012498   ⟹   ENSCAFP00845009763
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1249,568,083 - 49,650,639 (+)Ensembl
RefSeq Acc Id: XM_005627631   ⟹   XP_005627688
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11248,646,282 - 48,844,231 (+)NCBI
Dog10K_Boxer_Tasha1248,453,137 - 48,650,863 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022426351   ⟹   XP_022282059
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11248,646,173 - 48,844,231 (+)NCBI
Dog10K_Boxer_Tasha1248,453,031 - 48,650,863 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022426352   ⟹   XP_022282060
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11248,764,162 - 48,844,231 (+)NCBI
Dog10K_Boxer_Tasha1248,571,030 - 48,650,863 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022426355   ⟹   XP_022282063
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11248,692,434 - 48,844,231 (+)NCBI
Dog10K_Boxer_Tasha1248,499,238 - 48,650,863 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038492430   ⟹   XP_038348358
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11248,771,322 - 48,968,238 (+)NCBI
RefSeq Acc Id: XM_038554726   ⟹   XP_038410654
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01248,863,886 - 49,061,782 (+)NCBI
RefSeq Acc Id: XM_038618596   ⟹   XP_038474524
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01248,794,631 - 48,869,392 (+)NCBI
RefSeq Acc Id: XM_038618597   ⟹   XP_038474525
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01248,794,630 - 48,869,392 (+)NCBI
RefSeq Acc Id: XM_038618598   ⟹   XP_038474526
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01248,671,534 - 48,869,392 (+)NCBI
RefSeq Acc Id: XM_038618599   ⟹   XP_038474527
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01248,671,428 - 48,869,392 (+)NCBI
RefSeq Acc Id: XM_038618600   ⟹   XP_038474528
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01248,671,534 - 48,869,392 (+)NCBI
RefSeq Acc Id: XM_038618601   ⟹   XP_038474529
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01248,789,533 - 48,869,392 (+)NCBI
RefSeq Acc Id: XM_038618602   ⟹   XP_038474530
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01248,717,636 - 48,869,392 (+)NCBI
RefSeq Acc Id: XM_038618603   ⟹   XP_038474531
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01248,794,631 - 48,869,392 (+)NCBI
RefSeq Acc Id: XM_038618604   ⟹   XP_038474532
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01248,671,534 - 48,869,392 (+)NCBI
RefSeq Acc Id: XM_038618605   ⟹   XP_038474533
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01248,794,632 - 48,869,392 (+)NCBI
RefSeq Acc Id: XM_038618606   ⟹   XP_038474534
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01248,794,632 - 48,869,392 (+)NCBI
RefSeq Acc Id: XM_038618607   ⟹   XP_038474535
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01248,794,632 - 48,869,392 (+)NCBI
RefSeq Acc Id: XM_038618608   ⟹   XP_038474536
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01248,794,619 - 48,866,309 (+)NCBI
RefSeq Acc Id: XM_038678040   ⟹   XP_038533968
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1248,576,141 - 48,650,863 (+)NCBI
RefSeq Acc Id: XM_038678050   ⟹   XP_038533978
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1248,576,140 - 48,650,863 (+)NCBI
RefSeq Acc Id: XM_038678077   ⟹   XP_038534005
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1248,453,137 - 48,650,863 (+)NCBI
RefSeq Acc Id: XM_038678102   ⟹   XP_038534030
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1248,576,141 - 48,650,863 (+)NCBI
RefSeq Acc Id: XM_038678109   ⟹   XP_038534037
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1248,576,142 - 48,650,863 (+)NCBI
RefSeq Acc Id: XM_038678114   ⟹   XP_038534042
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1248,576,142 - 48,650,863 (+)NCBI
RefSeq Acc Id: XM_038678120   ⟹   XP_038534048
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1248,576,142 - 48,650,863 (+)NCBI
RefSeq Acc Id: XM_038678129   ⟹   XP_038534057
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1248,576,129 - 48,647,780 (+)NCBI
RefSeq Acc Id: XM_038684155   ⟹   XP_038540083
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01249,578,407 - 49,652,998 (+)NCBI
RefSeq Acc Id: XM_038684156   ⟹   XP_038540084
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01249,578,406 - 49,652,998 (+)NCBI
RefSeq Acc Id: XM_038684157   ⟹   XP_038540085
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01249,455,161 - 49,652,998 (+)NCBI
RefSeq Acc Id: XM_038684158   ⟹   XP_038540086
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01249,455,055 - 49,652,998 (+)NCBI
RefSeq Acc Id: XM_038684159   ⟹   XP_038540087
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01249,455,161 - 49,652,998 (+)NCBI
RefSeq Acc Id: XM_038684160   ⟹   XP_038540088
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01249,573,306 - 49,652,998 (+)NCBI
RefSeq Acc Id: XM_038684161   ⟹   XP_038540089
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01249,501,299 - 49,652,998 (+)NCBI
RefSeq Acc Id: XM_038684162   ⟹   XP_038540090
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01249,578,407 - 49,652,998 (+)NCBI
RefSeq Acc Id: XM_038684163   ⟹   XP_038540091
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01249,455,161 - 49,652,998 (+)NCBI
RefSeq Acc Id: XM_038684164   ⟹   XP_038540092
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01249,578,408 - 49,652,998 (+)NCBI
RefSeq Acc Id: XM_038684165   ⟹   XP_038540093
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01249,578,408 - 49,652,998 (+)NCBI
RefSeq Acc Id: XM_038684166   ⟹   XP_038540094
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01249,578,408 - 49,652,998 (+)NCBI
RefSeq Acc Id: XM_038684167   ⟹   XP_038540095
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01249,578,395 - 49,649,916 (+)NCBI
RefSeq Acc Id: XM_848749   ⟹   XP_853842
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11248,646,282 - 48,844,231 (+)NCBI
Dog10K_Boxer_Tasha1248,453,137 - 48,650,863 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005627688 (Get FASTA)   NCBI Sequence Viewer  
  XP_022282059 (Get FASTA)   NCBI Sequence Viewer  
  XP_022282060 (Get FASTA)   NCBI Sequence Viewer  
  XP_022282063 (Get FASTA)   NCBI Sequence Viewer  
  XP_038348358 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410654 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474524 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474525 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474526 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474527 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474528 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474529 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474530 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474531 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474532 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474533 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474534 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474535 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474536 (Get FASTA)   NCBI Sequence Viewer  
  XP_038533968 (Get FASTA)   NCBI Sequence Viewer  
  XP_038533978 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534005 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534030 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534037 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534042 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534048 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534057 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540083 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540084 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540085 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540086 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540087 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540088 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540089 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540090 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540091 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540092 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540093 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540094 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540095 (Get FASTA)   NCBI Sequence Viewer  
  XP_853842 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000004620.3
  ENSCAFP00000044094.1
  ENSCAFP00000048365.1
  ENSCAFP00000058735.1
  ENSCAFP00000060941.2
  ENSCAFP00000064929.1
  ENSCAFP00030018546.1
  ENSCAFP00030018776.1
  ENSCAFP00040018105.1
  ENSCAFP00845009611
  ENSCAFP00845009611.1
  ENSCAFP00845009681
  ENSCAFP00845009681.1
  ENSCAFP00845009721.1
  ENSCAFP00845009736.1
  ENSCAFP00845009751.1
  ENSCAFP00845009763
  ENSCAFP00845009763.1
Reference Protein Sequences
RefSeq Acc Id: XP_853842   ⟸   XM_848749
- Peptide Label: isoform X3
- UniProtKB: A0A8P0N626 (UniProtKB/TrEMBL),   A0A8C0N4Z2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005627688   ⟸   XM_005627631
- Peptide Label: isoform X5
- UniProtKB: A0A8P0TGF0 (UniProtKB/TrEMBL),   A0A8C0N4Z2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022282059   ⟸   XM_022426351
- Peptide Label: isoform X3
- UniProtKB: A0A8P0N626 (UniProtKB/TrEMBL),   A0A8C0N4Z2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022282063   ⟸   XM_022426355
- Peptide Label: isoform X3
- UniProtKB: A0A8P0N626 (UniProtKB/TrEMBL),   A0A8C0N4Z2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022282060   ⟸   XM_022426352
- Peptide Label: isoform X3
- UniProtKB: A0A8P0N626 (UniProtKB/TrEMBL),   A0A8C0N4Z2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000044094   ⟸   ENSCAFT00000067645
RefSeq Acc Id: ENSCAFP00000004620   ⟸   ENSCAFT00000004982
RefSeq Acc Id: ENSCAFP00000064929   ⟸   ENSCAFT00000083438
RefSeq Acc Id: ENSCAFP00000048365   ⟸   ENSCAFT00000076748
RefSeq Acc Id: ENSCAFP00000058735   ⟸   ENSCAFT00000075049
RefSeq Acc Id: ENSCAFP00000060941   ⟸   ENSCAFT00000061759
RefSeq Acc Id: XP_038348358   ⟸   XM_038492430
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038474527   ⟸   XM_038618599
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038474528   ⟸   XM_038618600
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038474526   ⟸   XM_038618598
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038474532   ⟸   XM_038618604
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038474530   ⟸   XM_038618602
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038474529   ⟸   XM_038618601
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038474536   ⟸   XM_038618608
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038474525   ⟸   XM_038618597
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038474524   ⟸   XM_038618596
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038474531   ⟸   XM_038618603
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038474533   ⟸   XM_038618605
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038474534   ⟸   XM_038618606
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038474535   ⟸   XM_038618607
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038540086   ⟸   XM_038684158
- Peptide Label: isoform X3
- UniProtKB: A0A8I3NFU8 (UniProtKB/TrEMBL),   A0A8C0N4Z2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038540087   ⟸   XM_038684159
- Peptide Label: isoform X3
- UniProtKB: A0A8I3NFU8 (UniProtKB/TrEMBL),   A0A8C0N4Z2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038540085   ⟸   XM_038684157
- Peptide Label: isoform X3
- UniProtKB: A0A8I3NFU8 (UniProtKB/TrEMBL),   A0A8C0N4Z2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038540091   ⟸   XM_038684163
- Peptide Label: isoform X5
- UniProtKB: A0A8I3MVR4 (UniProtKB/TrEMBL),   A0A8C0N4Z2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038540089   ⟸   XM_038684161
- Peptide Label: isoform X3
- UniProtKB: A0A8I3NFU8 (UniProtKB/TrEMBL),   A0A8C0N4Z2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038540088   ⟸   XM_038684160
- Peptide Label: isoform X3
- UniProtKB: A0A8I3NFU8 (UniProtKB/TrEMBL),   A0A8C0N4Z2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038540095   ⟸   XM_038684167
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038540084   ⟸   XM_038684156
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038540083   ⟸   XM_038684155
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038540090   ⟸   XM_038684162
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038540092   ⟸   XM_038684164
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038540093   ⟸   XM_038684165
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038540094   ⟸   XM_038684166
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038534005   ⟸   XM_038678077
- Peptide Label: isoform X3
- UniProtKB: A0A8P0N626 (UniProtKB/TrEMBL),   A0A8C0N4Z2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038534057   ⟸   XM_038678129
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038533978   ⟸   XM_038678050
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038533968   ⟸   XM_038678040
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038534030   ⟸   XM_038678102
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038534037   ⟸   XM_038678109
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038534042   ⟸   XM_038678114
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038534048   ⟸   XM_038678120
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038410654   ⟸   XM_038554726
- Peptide Label: isoform X3
- UniProtKB: A0A8C0N4Z2 (UniProtKB/TrEMBL),   A0A8P0N626 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845009681   ⟸   ENSCAFT00845012386
RefSeq Acc Id: ENSCAFP00845009763   ⟸   ENSCAFT00845012498
RefSeq Acc Id: ENSCAFP00845009751   ⟸   ENSCAFT00845012481
RefSeq Acc Id: ENSCAFP00845009721   ⟸   ENSCAFT00845012437
RefSeq Acc Id: ENSCAFP00845009611   ⟸   ENSCAFT00845012297
RefSeq Acc Id: ENSCAFP00845009736   ⟸   ENSCAFT00845012460

Promoters
RGD ID:13685507
Promoter ID:EPDNEW_C3575
Type:single initiation site
Name:ANKRD6_1
Description:ankyrin repeat domain 6
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11248,646,263 - 48,646,323EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000003105 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030011302 UniProtKB/TrEMBL
  ENSCAFG00040011249 UniProtKB/TrEMBL
  ENSCAFG00845006909 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000004982.5 UniProtKB/TrEMBL
  ENSCAFT00000061759.2 UniProtKB/TrEMBL
  ENSCAFT00000067645.2 UniProtKB/TrEMBL
  ENSCAFT00000075049.2 UniProtKB/TrEMBL
  ENSCAFT00000076748.2 UniProtKB/TrEMBL
  ENSCAFT00000083438.2 UniProtKB/TrEMBL
  ENSCAFT00030021275.1 UniProtKB/TrEMBL
  ENSCAFT00030021533.1 UniProtKB/TrEMBL
  ENSCAFT00040020858.1 UniProtKB/TrEMBL
  ENSCAFT00845012297 ENTREZGENE
  ENSCAFT00845012297.1 UniProtKB/TrEMBL
  ENSCAFT00845012386 ENTREZGENE
  ENSCAFT00845012386.1 UniProtKB/TrEMBL
  ENSCAFT00845012437.1 UniProtKB/TrEMBL
  ENSCAFT00845012460.1 UniProtKB/TrEMBL
  ENSCAFT00845012481.1 UniProtKB/TrEMBL
  ENSCAFT00845012498 ENTREZGENE
  ENSCAFT00845012498.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
KEGG Report cfa:481919 UniProtKB/TrEMBL
NCBI Gene ANKRD6 ENTREZGENE
PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  ANK_REP_REGION DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED UniProtKB/TrEMBL
  ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 6 UniProtKB/TrEMBL
  ANKYRIN REPEAT FAMILY PROTEIN UniProtKB/TrEMBL
  ANKYRIN REPEAT PROTEIN UniProtKB/TrEMBL
  E3 UBIQUITIN-PROTEIN LIGASE MIB2 UniProtKB/TrEMBL
  E3 UBIQUITIN-PROTEIN LIGASE MIB2 UniProtKB/TrEMBL
  L-ASPARAGINASE UniProtKB/TrEMBL
Pfam Ank UniProtKB/TrEMBL
  Ank_2 UniProtKB/TrEMBL
  Ank_4 UniProtKB/TrEMBL
PRINTS ANKYRIN UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/TrEMBL
UniProt A0A8C0N1H0_CANLF UniProtKB/TrEMBL
  A0A8C0N4Z2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0S9I0_CANLF UniProtKB/TrEMBL
  A0A8I3MU31_CANLF UniProtKB/TrEMBL
  A0A8I3MVR4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MZJ8_CANLF UniProtKB/TrEMBL
  A0A8I3N1M3_CANLF UniProtKB/TrEMBL
  A0A8I3NFU8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3RV49_CANLF UniProtKB/TrEMBL
  A0A8P0N626 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NUF9_CANLF UniProtKB/TrEMBL
  A0A8P0TCR6_CANLF UniProtKB/TrEMBL
  A0A8P0TGF0 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A8P0T169 UniProtKB/TrEMBL
  A0A8P0TAP4 UniProtKB/TrEMBL
VGNC ID VGNC:52103 ENTREZGENE