TXNDC12 (thioredoxin domain containing 12)

Gene: TXNDC12 (thioredoxin domain containing 12) Canis lupus familiaris

Analyze

Symbol:

TXNDC12

Name:

thioredoxin domain containing 12 (Ensembl:RAB3B, member RAS oncogene family)

RGD ID:

12062123

Description:

ENCODES a protein that exhibits protein-disulfide reductase (glutathione) activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

thioredoxin domain-containing protein 12; thioredoxin domain-containing protein 12-like

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	9,261,493 - 9,292,097 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	9,262,004 - 9,291,553 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	9,414,248 - 9,444,245 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	9,386,745 - 9,416,751 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	9,386,741 - 9,503,119 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	9,197,412 - 9,227,390 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	9,286,920 - 9,316,775 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	9,304,316 - 9,334,308 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

intracellular protein transport (IEA)

negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ISO)

protein localization to plasma membrane (IEA)

protein secretion (IEA)

protein transport (IEA)

regulation of exocytosis (IEA)

vesicle docking involved in exocytosis (IEA)

Cellular Component

endoplasmic reticulum (IEA)

endoplasmic reticulum lumen (ISO)

endosome (IEA)

membrane (IEA)

plasma membrane (IEA)

synaptic vesicle (IEA)

Molecular Function

GTP binding (IEA)

GTPase activity (IEA)

myosin V binding (IEA)

nucleotide binding (IEA)

oxidoreductase activity (IEA)

protein binding (ISO)

protein-disulfide reductase (glutathione) activity (ISO)

protein-disulfide reductase activity (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

TXNDC12
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	9,261,493 - 9,292,097 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	9,262,004 - 9,291,553 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	9,414,248 - 9,444,245 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	9,386,745 - 9,416,751 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	9,386,741 - 9,503,119 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	9,197,412 - 9,227,390 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	9,286,920 - 9,316,775 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	9,304,316 - 9,334,308 (+)	NCBI		UU_Cfam_GSD_1.0

TXNDC12
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	52,020,131 - 52,056,171 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	52,020,131 - 52,055,191 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	52,485,803 - 52,521,843 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	52,258,391 - 52,293,635 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	50,773,286 - 50,808,524 (-)	NCBI		Celera
Cytogenetic Map	1	p32.3	NCBI
HuRef	1	50,603,209 - 50,639,242 (-)	NCBI		HuRef
CHM1_1	1	52,603,297 - 52,639,345 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	51,901,645 - 51,937,676 (-)	NCBI		T2T-CHM13v2.0

Txndc12
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	108,691,875 - 108,719,317 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	108,691,798 - 108,719,324 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	108,834,678 - 108,862,120 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	108,834,601 - 108,862,127 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	108,507,283 - 108,534,725 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	108,332,610 - 108,360,052 (+)	NCBI		MGSCv36	mm8
Celera	4	107,172,837 - 107,199,896 (+)	NCBI		Celera
Cytogenetic Map	4	C7	NCBI
cM Map	4	50.64	NCBI

Txndc12
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	128,815,471 - 128,841,574 (+)	NCBI		GRCr8
mRatBN7.2	5	123,587,854 - 123,612,886 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	123,586,781 - 123,612,870 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	126,210,642 - 126,235,652 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	127,933,744 - 127,958,758 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	127,985,034 - 128,010,042 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	128,450,830 - 128,475,858 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	128,450,680 - 128,475,864 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	132,291,196 - 132,316,224 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	130,142,600 - 130,167,629 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	130,147,623 - 130,172,855 (+)	NCBI
Celera	5	122,322,074 - 122,347,022 (+)	NCBI		Celera
Cytogenetic Map	5	q34	NCBI

Txndc12
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955464	7,070,555 - 7,094,981 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955464	7,070,555 - 7,094,991 (+)	NCBI	ChiLan1.0	ChiLan1.0

TXNDC12
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	174,803,916 - 174,840,151 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	173,946,705 - 173,981,702 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	51,271,206 - 51,307,248 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	52,875,130 - 52,911,051 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	52,875,130 - 52,911,051 (-)	Ensembl	panpan1.1		panPan2

Txndc12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	66,514,852 - 66,607,833 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936522	8,877,826 - 8,903,110 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936522	8,877,832 - 8,900,659 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TXNDC12
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	160,137,018 - 160,168,222 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	160,136,744 - 160,168,225 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	147,852,519 - 147,870,966 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TXNDC12
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	80,894,151 - 80,929,686 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	80,895,228 - 80,929,704 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	36,341,887 - 36,377,088 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Txndc12
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624859	1,137,563 - 1,162,766 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624859	1,137,428 - 1,160,502 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TXNDC12
388 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	5	5	22	6	6	6	6	6	12	8	10	6
Low
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022427913	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038495674	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038558036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038621905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038687663	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_847187	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000160	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000044217 ⟹ ENSCAFP00000039403

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	15	9,262,049 - 9,291,553 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000087256 ⟹ ENSCAFP00000062571

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	15	9,262,004 - 9,278,097 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845037292 ⟹ ENSCAFP00845029209

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	15	9,386,741 - 9,402,839 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845037322 ⟹ ENSCAFP00845029232

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	15	9,386,761 - 9,416,747 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845037390 ⟹ ENSCAFP00845029289

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	15	9,386,775 - 9,500,791 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845037445 ⟹ ENSCAFP00845029336

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	15	9,386,804 - 9,500,791 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845037513 ⟹ ENSCAFP00845029391

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	15	9,386,809 - 9,503,119 (+)	Ensembl

RefSeq Acc Id:

XM_038495674 ⟹ XP_038351602

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	9,197,412 - 9,227,390 (+)	NCBI

RefSeq Acc Id:

XM_038558036 ⟹ XP_038413964

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	9,304,316 - 9,334,308 (+)	NCBI

RefSeq Acc Id:

XM_038621905 ⟹ XP_038477833

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	9,286,920 - 9,316,775 (+)	NCBI

RefSeq Acc Id:

XM_038687663 ⟹ XP_038543591

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	9,386,745 - 9,416,751 (+)	NCBI

RefSeq Acc Id:

XM_847187 ⟹ XP_852280

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	9,262,009 - 9,292,097 (+)	NCBI
Dog10K_Boxer_Tasha	15	9,414,248 - 9,444,245 (+)	NCBI

Sequence:

show sequence

AGACATCACTTCCTCAGGGTCACCGAGCTAGAAACTCTGGGGCGCGAGGGGTGCGGCTGAGCCG
CGCTCGGGGAGGCGCGGGCCTTGGCGGGGACGCGCCCCCGCGCACTGTCGCCATGGAGCTGCGG
CCTCACCTCGGGGCCACCTGTGCGCTGGGCTTGGGTCTCCTGCTGCTCGTCACCTCTTCTGATG
GACACATCGGGCTCGGAAAGGGTTTTGGAGATCACATTCATTGGAGGACACTAGAAGATGGGAA
GAAGGAAGCAGCTGCCAGTGGCTTACCTCTGATGGTGATTATCCATAAGTCCTGGTGTGGAGCT
TGCAAAGCTTTAAAGCCCAAATTTGCAGAATCTACAGAAATTTCAGAACTTTCCCATAATTTTG
TTATGGTGAATCTTGAGGATGAAGAGGAGCCAAAGGATGAAGATTTCAGCCCTGATGGGGGTTA
CATTCCACGAATCCTTTTTTTGGATCCCAGTGGCAAGGTGCATCCTGAAATCATCAATGAGAAT
GGAAACCCCAGCTACAAGTATTTCTATGTCAGTGCTGAGCAAGTTGTTCAGGGGATGAAGGAAG
CTCAGGAGAGGCTGACGGGGGATGCCTTCAGAGAGAAACATCTTGAAGATGAGTTGTAACATGA
ATATGTCCCTTCTTTCATCAAAGTTAGTGTTCTGGAAGGAAAGCAGCAGGGAAGGGAATATTGA
GGAATTGCTCAGGACAATTCAACCGACCAGGAAGCCTTGCTCCGGTCTACGTGGGAAGGAGCGC
TGTCACTGTGGAAGACTTCTGCTGACAGGAGCTGGTCTCCACGTCTGTGGATCCAGCACAGCAC
GGCACACTTCCTTCTGCCCCCTCCTAGATGTCTGTTCGTCATGGAATGTAAAGAATGACAGCTT
TTGACACAAAACTTGAGCCATTTGGAGATTTACTCCTCATACGTCAATATTTGAATCTTTTTCC
GTTTCCTCCCGCTTTATTCACCTTGATGGTGAAAGGAGACCGGTAGCATCTTTTCTACAGTATT
AAAATTGCAGAAGTAGTTTCTCATTTAAAACAACAAACTCAAATATAAATCAGTAATTCTATGC
CCGCCAGAGACCAGCCTGTTTCTTCTCCTTTTCTCCTGGGAATAATCTTGGGCTTCTTCCTGAA
TCCTGGCAACTTCCATCCTCTTCTACTGCTTGGGCTTCCCTGTTTGCACGCATGTGTGTGCAGG
AATGGCTGTGTGCTCGGACTCAGTCCCAGCTGGAAGCATGCTCTGCCCCGTTACTGTTCCGGAA
ACAGAAACCTTCAAGCCCTAGGTGGAGCCATTTTTGTCAAGTCATCAACTGTATTTTTGTACTG
AGGTTAACAAAAAAAATTAAAAATATTAATTGTTCCATTAAACTTTAATAAAACTTTGAAAGGA
AA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038351602	(Get FASTA)	NCBI Sequence Viewer
	XP_038413964	(Get FASTA)	NCBI Sequence Viewer
	XP_038477833	(Get FASTA)	NCBI Sequence Viewer
	XP_038543591	(Get FASTA)	NCBI Sequence Viewer
	XP_852280	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000035608.3
	ENSCAFP00000039403.2
	ENSCAFP00000062571.1
	ENSCAFP00000068601.1
	ENSCAFP00000073534.1
	ENSCAFP00030018394.1
	ENSCAFP00040013558.1
	ENSCAFP00845029209.1
	ENSCAFP00845029232
	ENSCAFP00845029232.1
	ENSCAFP00845029289.1
	ENSCAFP00845029336.1
	ENSCAFP00845029391.1

RefSeq Acc Id:	XP_852280 ⟸ XM_847187
- UniProtKB:	A0A8C0QRG8 (UniProtKB/TrEMBL), A0A8C0QYV3 (UniProtKB/TrEMBL), A0A8I3PAB3 (UniProtKB/TrEMBL), A0A8C0RHT7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MELRPHLGATCALGLGLLLLVTSSDGHIGLGKGFGDHIHWRTLEDGKKEAAASGLPLMVIIHKS WCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEI INENGNPSYKYFYVSAEQVVQGMKEAQERLTGDAFREKHLEDEL hide sequence

RefSeq Acc Id:

ENSCAFP00000062571 ⟸ ENSCAFT00000087256

RefSeq Acc Id:

ENSCAFP00000039403 ⟸ ENSCAFT00000044217

RefSeq Acc Id:

XP_038351602 ⟸ XM_038495674

RefSeq Acc Id:

XP_038477833 ⟸ XM_038621905

RefSeq Acc Id:	XP_038543591 ⟸ XM_038687663
- UniProtKB:	A0A8C0QRG8 (UniProtKB/TrEMBL), A0A8C0QYV3 (UniProtKB/TrEMBL), A0A8I3PAB3 (UniProtKB/TrEMBL), A0A8C0RHT7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038413964 ⟸ XM_038558036
- UniProtKB:	A0A8C0QRG8 (UniProtKB/TrEMBL), A0A8C0QYV3 (UniProtKB/TrEMBL), A0A8C0RHT7 (UniProtKB/TrEMBL), A0A8I3PAB3 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845029232 ⟸ ENSCAFT00845037322

RefSeq Acc Id:

ENSCAFP00845029336 ⟸ ENSCAFT00845037445

RefSeq Acc Id:

ENSCAFP00845029209 ⟸ ENSCAFT00845037292

RefSeq Acc Id:

ENSCAFP00845029289 ⟸ ENSCAFT00845037390

RefSeq Acc Id:

ENSCAFP00845029391 ⟸ ENSCAFT00845037513

Protein Domains

Thioredoxin

Promoters

RGD ID:

13685883

Promoter ID:

EPDNEW_C3951

Type:

initiation region

Name:

TXNDC12_1

Description:

thioredoxin domain containing 12

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	9,262,030 - 9,262,090	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000029215	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030011340	UniProtKB/TrEMBL
	ENSCAFG00040008380	UniProtKB/TrEMBL
	ENSCAFG00845021135	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000039721.4	UniProtKB/TrEMBL
	ENSCAFT00000044217.3	UniProtKB/TrEMBL
	ENSCAFT00000087256.2	UniProtKB/TrEMBL
	ENSCAFT00000100740.1	UniProtKB/TrEMBL
	ENSCAFT00000101101.1	UniProtKB/TrEMBL
	ENSCAFT00030021097.1	UniProtKB/TrEMBL
	ENSCAFT00040015643.1	UniProtKB/TrEMBL
	ENSCAFT00845037292.1	UniProtKB/TrEMBL
	ENSCAFT00845037322	ENTREZGENE
	ENSCAFT00845037322.1	UniProtKB/TrEMBL
	ENSCAFT00845037390.1	UniProtKB/TrEMBL
	ENSCAFT00845037445.1	UniProtKB/TrEMBL
	ENSCAFT00845037513.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.300	UniProtKB/TrEMBL
	Glutaredoxin	UniProtKB/TrEMBL
InterPro	ERp19	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	Rab3	UniProtKB/TrEMBL
	Small_GTP-bd_dom	UniProtKB/TrEMBL
	Small_GTPase	UniProtKB/TrEMBL
	Thioredoxin-like_sf	UniProtKB/TrEMBL
	Thioredoxin_CS	UniProtKB/TrEMBL
	Thioredoxin_domain	UniProtKB/TrEMBL
KEGG Report	cfa:609843	UniProtKB/TrEMBL
NCBI Gene	TXNDC12	ENTREZGENE
PANTHER	ANTERIOR GRADIENT PROTEIN-RELATED	UniProtKB/TrEMBL
	LD44762P	UniProtKB/TrEMBL
	RAS-RELATED PROTEIN RAB-3B	UniProtKB/TrEMBL
	THIOREDOXIN DOMAIN-CONTAINING PROTEIN 12	UniProtKB/TrEMBL
Pfam	Ras	UniProtKB/TrEMBL
	Thioredoxin_7	UniProtKB/TrEMBL
PRINTS	RASTRNSFRMNG	UniProtKB/TrEMBL
PROSITE	RAB	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
	THIOREDOXIN_1	UniProtKB/TrEMBL
	THIOREDOXIN_2	UniProtKB/TrEMBL
SMART	RAB	UniProtKB/TrEMBL
	RAN	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
	SSF52833	UniProtKB/TrEMBL
UniProt	A0A8C0QRG8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0QYV3	ENTREZGENE
	A0A8C0RHT7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3P782_CANLF	UniProtKB/TrEMBL
	A0A8I3PAB3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PF48_CANLF	UniProtKB/TrEMBL
	A0A8I3PG06_CANLF	UniProtKB/TrEMBL
	A0A8I3S4T4_CANLF	UniProtKB/TrEMBL
	A0A8P0NN40_CANLF	UniProtKB/TrEMBL
	A0A8P0NQU7_CANLF	UniProtKB/TrEMBL
	A0A8P0TE51_CANLF	UniProtKB/TrEMBL
	A0A8P0TKJ9_CANLF	UniProtKB/TrEMBL
	A0A8P0TRV1_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:48011	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar