CAVIN3 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 21 | 29,661,235 - 29,663,393 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 21 | 29,661,980 - 29,716,313 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 21 | 29,363,357 - 29,365,498 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 21 | 30,487,609 - 30,489,721 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 21 | 30,485,318 - 30,489,996 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 21 | 29,808,695 - 29,810,832 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 21 | 29,974,518 - 29,976,636 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 21 | 30,169,413 - 30,171,524 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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CAVIN3 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 11 | 6,318,946 - 6,320,501 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 6,318,946 - 6,320,532 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 6,340,176 - 6,341,731 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 6,296,752 - 6,298,316 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 11 | 6,296,753 - 6,298,316 | NCBI | | | | | Celera | 11 | 6,459,218 - 6,460,782 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | p15.4 | NCBI | | | | | HuRef | 11 | 6,000,077 - 6,001,641 (-) | NCBI | | HuRef | | | CHM1_1 | 11 | 6,339,390 - 6,340,954 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 6,377,369 - 6,378,924 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Cavin3 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 7 | 105,129,823 - 105,131,404 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 105,129,290 - 105,131,507 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 7 | 105,480,616 - 105,482,197 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 105,480,083 - 105,482,300 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 7 | 112,629,130 - 112,630,711 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 105,354,437 - 105,356,018 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 105,752,686 - 105,754,267 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | E3 | NCBI | | | | | cM Map | 7 | 55.87 | NCBI | | | | |
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Cavin3 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 1 | 169,238,384 - 169,239,973 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 159,826,549 - 159,828,138 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 159,826,549 - 159,828,161 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 167,848,411 - 167,849,999 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 175,034,401 - 175,035,989 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 167,930,386 - 167,931,974 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 170,317,099 - 170,318,688 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 170,317,113 - 170,318,935 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 177,323,467 - 177,325,056 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 163,212,922 - 163,214,511 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 163,308,398 - 163,309,988 (-) | NCBI | | | | | Celera | 1 | 157,761,026 - 157,762,615 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q32 | NCBI | | | | |
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Cavin3 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955414 | 22,050,109 - 22,054,374 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955414 | 22,052,885 - 22,054,672 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CAVIN3 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 9 | 8,756,518 - 8,759,329 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 8,720,377 - 8,722,903 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 6,451,364 - 6,453,206 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 6,133,656 - 6,135,468 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 6,133,656 - 6,135,485 (-) | Ensembl | panpan1.1 | | panPan2 | |
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Cavin3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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CAVIN3 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 9 | 3,378,207 - 3,379,847 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 3,378,144 - 3,379,851 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 3,991,701 - 3,993,411 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CAVIN3 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 1 | 58,504,726 - 58,507,200 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 58,504,782 - 58,507,438 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 156,332,864 - 156,334,561 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Cavin3 (Heterocephalus glaber - naked mole-rat) |
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