PRR32 (proline rich 32) - Rat Genome Database

Name: PRR32
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: PRR32 (proline rich 32) Canis lupus familiaris

Analyze

Symbol:

PRR32

Name:

proline rich 32

RGD ID:

12055352

Description:

ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); oculocerebrorenal syndrome (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

proline-rich protein 32

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PRR32 (proline rich 32)	HGNC	EggNOG, Ensembl, HomoloGene, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Prr32 (proline rich 32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Prr32 (proline rich 32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PRR32 (proline rich 32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Prr32 (proline rich 32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PRR32 (proline rich 32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PRR32 (proline rich 32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Prr32 (proline rich 32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	98,039,088 - 98,041,175 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	98,039,168 - 98,041,060 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	84,158,387 - 84,160,456 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	99,866,086 - 99,868,155 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	99,866,148 - 99,868,040 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	97,267,271 - 97,269,339 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	99,116,848 - 99,118,917 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	98,843,982 - 98,846,051 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

genetic disease (ISO)

oculocerebrorenal syndrome (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

Genomics

Comparative Map Data

PRR32
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	98,039,088 - 98,041,175 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	98,039,168 - 98,041,060 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	84,158,387 - 84,160,456 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	99,866,086 - 99,868,155 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	99,866,148 - 99,868,040 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	97,267,271 - 97,269,339 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	99,116,848 - 99,118,917 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	98,843,982 - 98,846,051 (+)	NCBI		UU_Cfam_GSD_1.0

PRR32
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	126,819,729 - 126,821,786 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	126,819,729 - 126,821,786 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	125,953,712 - 125,955,769 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	125,781,432 - 125,783,450 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	X	126,335,893 - 126,337,916 (+)	NCBI		Celera
Cytogenetic Map	X	q25	NCBI
HuRef	X	115,333,858 - 115,335,878 (+)	NCBI		HuRef
CHM1_1	X	125,865,048 - 125,867,071 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	125,133,275 - 125,135,332 (+)	NCBI		T2T-CHM13v2.0

Prr32
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	44,179,805 - 44,181,668 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	44,179,781 - 44,181,668 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	45,090,904 - 45,092,791 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	45,090,904 - 45,092,791 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	42,444,081 - 42,445,968 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	41,335,531 - 41,337,418 (+)	NCBI		MGSCv36	mm8
Celera	X	32,628,434 - 32,630,321 (+)	NCBI		Celera
Cytogenetic Map	X	A4	NCBI
cM Map	X	24.11	NCBI

Prr32
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	128,856,085 - 128,858,003 (+)	NCBI		GRCr8
mRatBN7.2	X	123,978,010 - 123,979,928 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	123,977,985 - 123,979,942 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	126,071,356 - 126,073,279 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	129,587,989 - 129,589,904 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	127,155,475 - 127,157,398 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	131,617,765 - 131,619,762 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	131,617,798 - 131,619,728 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	131,703,301 - 131,705,270 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	X	123,023,905 - 123,025,902 (+)	NCBI		Celera
Cytogenetic Map	X	q35	NCBI

PRR32
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	126,286,784 - 126,288,869 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	126,290,397 - 126,292,455 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	115,995,655 - 115,997,713 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	126,248,159 - 126,250,182 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

Prr32
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	96,735,907 - 96,738,030 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936479	4,249,465 - 4,251,586 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936479	4,249,494 - 4,251,514 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PRR32
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	103,813,405 - 103,815,193 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	103,813,092 - 103,815,208 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	118,823,780 - 118,825,774 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PRR32
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Vero_WHO_p1.0	NW_023666065	39,535,686 - 39,537,660 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Prr32
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624797	5,674,272 - 5,675,119 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in PRR32
8 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium		4	1						1
Low	4	1	5				3	4	5		2	6
Below cutoff	1		11	2	6	2	3	2	6	8	8

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005641785	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038449061	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038586602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038651020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000394	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000029613 ⟹ ENSCAFP00000027523

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	X	98,039,168 - 98,041,060 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845055021 ⟹ ENSCAFP00845043263

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	X	99,866,148 - 99,868,040 (+)	Ensembl

RefSeq Acc Id:

XM_005641785 ⟹ XP_005641842

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	X	98,039,088 - 98,041,175 (+)	NCBI
Dog10K_Boxer_Tasha	X	84,158,387 - 84,160,456 (+)	NCBI

Sequence:

show sequence

TTCCCTAGCAACTGGTAACCTCAGAAAGAGAACTCCAAATCTAGAAAGAAGCAGTTGGTCCCTG
GCTTCATTCGAGTAGCCAAGCTGCTCTAAAGCAGAAGCACAAGTCCTCTCTCCAGACTGAGCTG
GCCTACGTGGGCTTTCAGCTGGTTTTCTACATTATCTCACAAAGGTTTTCCTGATCAACTTTCT
CCATGGCTTGTATTGAAAATGTCCTTGGTGGGCACGCCCCTTCACCCAGTGGAGTTGTTGCAAA
TGAGTGTGGGATCCGGGAGCCGCACCCCGACGACGTGTCTCTCCAGTGTTCCAGTTCCTTGCCG
AAAGACGATGTGGAGCCTTGGGGCCACCATCGCGTCCTGCTGAGACCTCCCCTCAATGTGCTGA
CTGACCTGGCGAGAGAGCAGCTGGAGCGCCCCTCCGAGACCGCAGGAGCCTGCATTCCTGTCGA
CAGTTCCAGAGCTCACAAACACCCCTATGGGCCACCACCTGCTGTTGCGGAAGAGTCCCTAGCA
ACAGCAGAAGTAAATAGCTCGGAGGGGCTGGCAGGCTGGAGGCTTAGGGGACAGGATTCTATTA
ATGTGTCCCAGGAATTCTCTGGCAGCCCTCCCGCACTGATGATAGGGGGGGCAAGGGTCAGCAG
TGGGGGCACCGAGAGAGGTGGCAATAATGCAAGGTTATACATGGCTTTGCCACGAGGTCAGGGG
TTCTTTCCACCCAGGGGTTCACAAATAAGAGCCCCCCCACATATCCCCACAATTAGATCAGGGG
TAATGATGGAGCTGCCTCTAGGAAATACAAGAATGGCTAGCAAGGAAAGGCTGGCTCATGTTTC
TTTCCCACAGGGAGGCCCGCGGCACCCCGTGGAAAATTGGCCAAGGTCTCTCCCCTTGTCTTCC
AGCACTCCCGGTTTACCTTCTCGTCCTACTGCTCATTGCTTTATATCTCCTCGACCTCCTCCGA
GTTTCAGTCCATTTCTTGCTATGCCTATTGCTTTTGCTCCACCCCCGATATTTGGTCCTCCGCT
GCCTTCTTATTTTGCCAATTTTCCTTCTTGGGGTATGCCGGCTCCTGCGCCCTCAAACAGAGAG
AACAACTGAGGACAATAAACGGAGGGGGGAAAAGGGTTGGAGGGAAAAGGTGAAAATTACTCAT
TTACGTTTTTATATTTGAAACCCCCTACCCTCTTAAACTTTGTTTAGCACTAATGTGCCTTACA
TGATTGAAGATTCAATAAAAATTCTAAAGTTTGAAA

hide sequence

RefSeq Acc Id:

XM_038449061 ⟹ XP_038304989

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	X	99,866,086 - 99,868,155 (+)	NCBI

RefSeq Acc Id:

XM_038525036 ⟹ XP_038380964

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	X	97,267,271 - 97,269,339 (+)	NCBI

RefSeq Acc Id:

XM_038586602 ⟹ XP_038442530

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	X	98,843,982 - 98,846,051 (+)	NCBI

RefSeq Acc Id:

XM_038651020 ⟹ XP_038506948

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	X	99,116,848 - 99,118,917 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005641842	(Get FASTA)	NCBI Sequence Viewer
	XP_038304989	(Get FASTA)	NCBI Sequence Viewer
	XP_038380964	(Get FASTA)	NCBI Sequence Viewer
	XP_038442530	(Get FASTA)	NCBI Sequence Viewer
	XP_038506948	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000027523.4
	ENSCAFP00030032780.1
	ENSCAFP00040030604.1
	ENSCAFP00845043263
	ENSCAFP00845043263.1

RefSeq Acc Id:

XP_005641842 ⟸ XM_005641785

- UniProtKB:

A0A8C0NXJ2 (UniProtKB/TrEMBL), A0A8I3Q5X0 (UniProtKB/TrEMBL), A0A8C0T5A6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MACIENVLGGHAPSPSGVVANECGIREPHPDDVSLQCSSSLPKDDVEPWGHHRVLLRPPLNVLT
DLAREQLERPSETAGACIPVDSSRAHKHPYGPPPAVAEESLATAEVNSSEGLAGWRLRGQDSIN
VSQEFSGSPPALMIGGARVSSGGTERGGNNARLYMALPRGQGFFPPRGSQIRAPPHIPTIRSGV
MMELPLGNTRMASKERLAHVSFPQGGPRHPVENWPRSLPLSSSTPGLPSRPTAHCFISPRPPPS
FSPFLAMPIAFAPPPIFGPPLPSYFANFPSWGMPAPAPSNRENN

hide sequence

RefSeq Acc Id:

ENSCAFP00000027523 ⟸ ENSCAFT00000029613

RefSeq Acc Id:

XP_038380964 ⟸ XM_038525036

RefSeq Acc Id:

XP_038506948 ⟸ XM_038651020

RefSeq Acc Id:	XP_038304989 ⟸ XM_038449061
- UniProtKB:	A0A8C0NXJ2 (UniProtKB/TrEMBL), A0A8I3Q5X0 (UniProtKB/TrEMBL), A0A8C0T5A6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038442530 ⟸ XM_038586602
- UniProtKB:	A0A8C0NXJ2 (UniProtKB/TrEMBL), A0A8C0T5A6 (UniProtKB/TrEMBL), A0A8I3Q5X0 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845043263 ⟸ ENSCAFT00845055021

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000018654	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030020473	UniProtKB/TrEMBL
	ENSCAFG00040019019	UniProtKB/TrEMBL
	ENSCAFG00845030958	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000029613.5	UniProtKB/TrEMBL
	ENSCAFT00030037571.1	UniProtKB/TrEMBL
	ENSCAFT00040035151.1	UniProtKB/TrEMBL
	ENSCAFT00845055021	ENTREZGENE
	ENSCAFT00845055021.1	UniProtKB/TrEMBL
InterPro	DUF4645	UniProtKB/TrEMBL
NCBI Gene	PRR32	ENTREZGENE
PANTHER	PROLINE-RICH PROTEIN 32	UniProtKB/TrEMBL
	PTHR37343	UniProtKB/TrEMBL
Pfam	DUF4645	UniProtKB/TrEMBL
UniProt	A0A8C0NXJ2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0T5A6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3Q5X0	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:45045	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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