OR9A8 (olfactory receptor family 9 subfamily A member 8) - Rat Genome Database

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Gene: OR9A8 (olfactory receptor family 9 subfamily A member 8) Canis lupus familiaris
Analyze
Symbol: OR9A8
Name: olfactory receptor family 9 subfamily A member 8
RGD ID: 12052423
Description: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Type: protein-coding
RefSeq Status: INFERRED
Previously known as: LOC100686794; olfactory receptor 9A4
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1166,577,571 - 6,580,293 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl166,578,449 - 6,579,390 (+)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0166,489,350 - 6,490,291 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl166,489,350 - 6,490,291 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1166,437,152 - 6,438,093 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0166,288,629 - 6,289,570 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0166,352,876 - 6,353,817 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
OR9A8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1166,577,571 - 6,580,293 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl166,578,449 - 6,579,390 (+)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0166,489,350 - 6,490,291 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl166,489,350 - 6,490,291 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1166,437,152 - 6,438,093 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0166,288,629 - 6,289,570 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0166,352,876 - 6,353,817 (+)NCBIUU_Cfam_GSD_1.0
OR9A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387143,026,200 - 143,027,132 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7143,026,200 - 143,027,132 (-)EnsemblGRCh38hg38GRCh38
GRCh377142,723,287 - 142,724,219 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367142,433,409 - 142,434,341 (-)NCBINCBI36Build 36hg18NCBI36
Build 347142,240,123 - 142,241,056NCBI
Celera7137,560,149 - 137,561,081 (-)NCBICelera
Cytogenetic Map7q34NCBI
HuRef7137,061,545 - 137,062,477 (-)NCBIHuRef
CHM1_17142,660,172 - 142,661,104 (-)NCBICHM1_1
T2T-CHM13v2.07144,381,613 - 144,382,545 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27142,125,157 - 142,126,089 (-)NCBI
Or9a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39641,748,287 - 41,749,231 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl641,745,704 - 41,752,111 (-)EnsemblGRCm39 Ensembl
GRCm38641,771,353 - 41,772,297 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl641,768,770 - 41,775,177 (-)EnsemblGRCm38mm10GRCm38
MGSCv37641,721,352 - 41,722,296 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36641,700,960 - 41,701,904 (-)NCBIMGSCv36mm8
Celera641,723,933 - 41,724,877 (-)NCBICelera
Cytogenetic Map6B2.1NCBI
cM Map619.96NCBI
Or9a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8471,638,088 - 71,639,032 (-)NCBIGRCr8
mRatBN7.2470,671,451 - 70,672,395 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl470,670,720 - 70,673,686 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx475,588,926 - 75,589,870 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0471,502,175 - 71,503,119 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0469,907,006 - 69,907,950 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0471,079,555 - 71,080,499 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl471,079,555 - 71,080,499 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04135,871,426 - 135,872,370 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera465,629,240 - 65,630,184 (-)NCBICelera
Cytogenetic Map4q24NCBI
LOC102029408
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955494618,271 - 619,213 (+)NCBIChiLan1.0ChiLan1.0
LOC100989032
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26179,873,893 - 179,874,827 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1731,884,150 - 31,885,084 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07135,016,486 - 135,017,420 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17147,507,388 - 147,508,322 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7147,507,388 - 147,508,322 (-)Ensemblpanpan1.1panPan2
LOC101962398
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511812,435,414 - 12,436,610 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936527467,003 - 467,947 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936527467,003 - 467,944 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC103227121
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121111,902,324 - 111,904,268 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660728,624,223 - 8,629,406 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in OR9A8
15 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00000062529   ⟹   ENSCAFP00000051120
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl166,578,449 - 6,579,390 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845031786   ⟹   ENSCAFP00845024871
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl166,489,350 - 6,490,291 (+)Ensembl
RefSeq Acc Id: NM_001389059   ⟹   NP_001375988
RefSeq Status: INFERRED
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0166,489,350 - 6,490,291 (+)NCBI
UMICH_Zoey_3.1166,437,152 - 6,438,093 (+)NCBI
UNSW_CanFamBas_1.0166,288,629 - 6,289,570 (+)NCBI
UU_Cfam_GSD_1.0166,352,876 - 6,353,817 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001375988 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00030017118.1
  ENSCAFP00040008857.1
  ENSCAFP00845024871
  ENSCAFP00845024871.1
Reference Protein Sequences
RefSeq Acc Id: ENSCAFP00000051120   ⟸   ENSCAFT00000062529
RefSeq Acc Id: NP_001375988   ⟸   NM_001389059
- UniProtKB: A0A8C0N3Y0 (UniProtKB/TrEMBL),   A0A8I3NV23 (UniProtKB/TrEMBL),   A0A8C0L3P0 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845024871   ⟸   ENSCAFT00845031786
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000045667 Ensembl
  ENSCAFG00030010624 UniProtKB/TrEMBL
  ENSCAFG00040005439 UniProtKB/TrEMBL
  ENSCAFG00845017959 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00030019628.1 UniProtKB/TrEMBL
  ENSCAFT00040010207.1 UniProtKB/TrEMBL
  ENSCAFT00845031786 ENTREZGENE
  ENSCAFT00845031786.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC100686794 ENTREZGENE
PANTHER G-PROTEIN COUPLED RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 9A2 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8C0L3P0 ENTREZGENE
  A0A8C0N3Y0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NV23 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:98691 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-03-10 OR9A8  olfactory receptor family 9 subfamily A member 8  LOC100686794  olfactory receptor 9A4  Symbol and/or name change 5135510 APPROVED