OR52E7 (olfactory receptor family 52 subfamily E member 7) - Rat Genome Database

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Gene: OR52E7 (olfactory receptor family 52 subfamily E member 7) Canis lupus familiaris
Analyze
Symbol: OR52E7
Name: olfactory receptor family 52 subfamily E member 7
RGD ID: 12050490
Description: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Type: protein-coding
RefSeq Status: INFERRED
Previously known as: LOC485308; olfactory receptor 52E8-like
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12129,062,822 - 29,067,510 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2129,062,903 - 29,063,871 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2128,836,484 - 28,837,428 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02129,888,028 - 29,888,972 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2129,888,004 - 29,888,972 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12129,210,631 - 29,211,575 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02129,394,904 - 29,395,848 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02129,564,610 - 29,565,554 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Variants

.
Variants in OR52E7
90 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

hemolymphoid system musculoskeletal system reproductive system
High
Medium
Low 8
Below cutoff 2 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00000037730   ⟹   ENSCAFP00000033302
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2129,062,903 - 29,063,871 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845011138   ⟹   ENSCAFP00845008686
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2129,888,004 - 29,888,972 (+)Ensembl
RefSeq Acc Id: NM_001388719   ⟹   NP_001375648
RefSeq Status: INFERRED
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2128,836,484 - 28,837,428 (+)NCBI
ROS_Cfam_1.02129,888,028 - 29,888,972 (+)NCBI
UMICH_Zoey_3.12129,210,631 - 29,211,575 (+)NCBI
UNSW_CanFamBas_1.02129,394,904 - 29,395,848 (+)NCBI
UU_Cfam_GSD_1.02129,564,610 - 29,565,554 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001375648 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000033302.2
  ENSCAFP00030016775.1
  ENSCAFP00040028736.1
  ENSCAFP00845008686
  ENSCAFP00845008686.1
Reference Protein Sequences
RefSeq Acc Id: ENSCAFP00000033302   ⟸   ENSCAFT00000037730
RefSeq Acc Id: NP_001375648   ⟸   NM_001388719
- UniProtKB: A0A8C0T2I9 (UniProtKB/TrEMBL),   A0A8I3N2A2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845008686   ⟸   ENSCAFT00845011138
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000024431 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030010427 UniProtKB/TrEMBL
  ENSCAFG00040017904 UniProtKB/TrEMBL
  ENSCAFG00845006292 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000037730.3 UniProtKB/TrEMBL
  ENSCAFT00030019233.1 UniProtKB/TrEMBL
  ENSCAFT00040033027.1 UniProtKB/TrEMBL
  ENSCAFT00845011138 ENTREZGENE
  ENSCAFT00845011138.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC485308 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 56B1-RELATED UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8C0T2I9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N2A2 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:95467 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-02-04 OR52E7  olfactory receptor family 52 subfamily E member 7  LOC485308  olfactory receptor 52E8-like  Symbol and/or name change 5135510 APPROVED