LRRC75B (leucine rich repeat containing 75B) - Rat Genome Database

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Gene: LRRC75B (leucine rich repeat containing 75B) Pan paniscus
Analyze
Symbol: LRRC75B
Name: leucine rich repeat containing 75B
RGD ID: 12049238
Description: ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); schizophrenia (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: FAM211B; family with sequence similarity 211, member B; leucine-rich repeat-containing protein 75B; leucine-rich repeat-containing protein 75B-like; LOC100974584; LOC117977522
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22334,375,107 - 34,382,643 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12237,105,682 - 37,113,236 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0225,426,205 - 5,433,751 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12222,258,243 - 22,277,007 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
LRRC75B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22334,375,107 - 34,382,643 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12237,105,682 - 37,113,236 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0225,426,205 - 5,433,751 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12222,258,243 - 22,277,007 (-)NCBIpanpan1.1PanPan1.1panPan2
LRRC75B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382224,585,635 - 24,593,073 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2224,585,620 - 24,593,208 (-)EnsemblGRCh38hg38GRCh38
GRCh372224,981,603 - 24,989,040 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362223,311,591 - 23,319,035 (-)NCBINCBI36Build 36hg18NCBI36
Celera228,781,332 - 8,788,778 (-)NCBICelera
Cytogenetic Map22q11.23NCBI
HuRef227,931,277 - 7,938,722 (-)NCBIHuRef
CHM1_12224,940,400 - 24,947,843 (-)NCBICHM1_1
T2T-CHM13v2.02225,047,236 - 25,054,674 (-)NCBIT2T-CHM13v2.0
Lrrc75b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391075,385,953 - 75,396,532 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1075,385,957 - 75,396,164 (-)EnsemblGRCm39 Ensembl
GRCm381075,550,119 - 75,560,680 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1075,550,123 - 75,560,330 (-)EnsemblGRCm38mm10GRCm38
MGSCv371075,012,870 - 75,023,075 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361074,993,845 - 75,004,046 (-)NCBIMGSCv36mm8
Celera1076,594,823 - 76,605,027 (-)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1038.55NCBI
Lrrc75b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82013,099,741 - 13,105,942 (+)NCBIGRCr8
mRatBN7.22013,100,302 - 13,106,503 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2013,100,302 - 13,106,503 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2013,806,878 - 13,813,075 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02013,167,822 - 13,174,021 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02013,640,327 - 13,646,526 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02014,050,465 - 14,056,670 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2014,050,465 - 14,060,264 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02016,235,987 - 16,242,192 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2014,586,049 - 14,592,254 (+)NCBICelera
Cytogenetic Map20p12NCBI
Lrrc75b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554558,068,535 - 8,074,399 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554558,068,573 - 8,074,399 (-)NCBIChiLan1.0ChiLan1.0
LRRC75B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12628,283,050 - 28,287,750 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2628,283,260 - 28,285,715 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2627,358,002 - 27,364,509 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02629,687,421 - 29,693,890 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2629,682,407 - 29,694,011 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12627,771,345 - 27,777,860 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02627,388,125 - 27,394,644 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02628,378,214 - 28,384,729 (-)NCBIUU_Cfam_GSD_1.0
Lrrc75b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118141,987,855 - 141,993,692 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936619757,178 - 766,477 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936619760,370 - 766,207 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LRRC75B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1449,609,347 - 49,615,348 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11449,609,111 - 49,615,312 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21453,051,015 - 53,057,275 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LRRC75B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1197,387,320 - 7,547,322 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660854,755,873 - 4,761,452 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lrrc75b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474710,014,482 - 10,021,754 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474710,015,742 - 10,021,754 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034948469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_034948469   ⟹   XP_034804360
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22334,375,107 - 34,382,643 (-)NCBI
NHGRI_mPanPan12237,105,682 - 37,113,236 (-)NCBI
Mhudiblu_PPA_v0225,426,205 - 5,433,751 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034804360 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000040852.1
Reference Protein Sequences
RefSeq Acc Id: XP_034804360   ⟸   XM_034948469
- UniProtKB: A0A2R9CQA4 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000043062 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000063773.1 UniProtKB/TrEMBL
Gene3D-CATH Ribonuclease Inhibitor UniProtKB/TrEMBL
InterPro LRR_dom_sf UniProtKB/TrEMBL
NCBI Gene LRRC75B ENTREZGENE
PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 75B UniProtKB/TrEMBL
  PTHR39654 UniProtKB/TrEMBL
PROSITE PROKAR_LIPOPROTEIN UniProtKB/TrEMBL
Superfamily-SCOP RNI-like UniProtKB/TrEMBL
UniProt A0A2R9CQA4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-05-02 LRRC75B  leucine rich repeat containing 75B  LOC100974584  leucine-rich repeat-containing protein 75B  Symbol and/or name change 5135510 APPROVED
2023-04-20 LOC100974584  leucine-rich repeat-containing protein 75B  LOC117977522  leucine-rich repeat-containing protein 75B-like  Data merged from RGD:32732745 737654 PROVISIONAL
2020-07-01 LOC100974584  leucine-rich repeat-containing protein 75B  LRRC75B  leucine rich repeat containing 75B  Symbol and/or name change 5135510 APPROVED