ARL14EP (ADP ribosylation factor like GTPase 14 effector protein) - Rat Genome Database

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Gene: ARL14EP (ADP ribosylation factor like GTPase 14 effector protein) Pan paniscus
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Symbol: ARL14EP
Name: ADP ribosylation factor like GTPase 14 effector protein
RGD ID: 12048163
Description: ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytosol (inferred); focal adhesion (inferred); intracellular membrane-bounded organelle (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2932,542,891 - 32,558,291 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11132,547,529 - 32,566,210 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01130,296,433 - 30,311,798 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11130,188,013 - 30,203,170 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1130,188,013 - 30,203,170 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ARL14EP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2932,542,891 - 32,558,291 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11132,547,529 - 32,566,210 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01130,296,433 - 30,311,798 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11130,188,013 - 30,203,170 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1130,188,013 - 30,203,170 (+)Ensemblpanpan1.1panPan2
ARL14EP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381130,323,104 - 30,338,223 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1130,323,104 - 30,338,223 (+)EnsemblGRCh38hg38GRCh38
GRCh371130,344,651 - 30,359,770 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361130,301,225 - 30,315,741 (+)NCBINCBI36Build 36hg18NCBI36
Celera1130,491,042 - 30,505,559 (+)NCBICelera
Cytogenetic Map11p14.1NCBI
HuRef1130,037,207 - 30,051,724 (+)NCBIHuRef
CHM1_11130,343,723 - 30,358,213 (+)NCBICHM1_1
T2T-CHM13v2.01130,457,405 - 30,472,507 (+)NCBIT2T-CHM13v2.0
Arl14ep
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392106,792,874 - 106,804,742 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2106,792,872 - 106,804,769 (-)EnsemblGRCm39 Ensembl
GRCm382106,962,529 - 106,974,397 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2106,962,527 - 106,974,424 (-)EnsemblGRCm38mm10GRCm38
MGSCv372106,802,686 - 106,814,554 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362106,763,368 - 106,775,236 (-)NCBIMGSCv36mm8
Celera2108,184,238 - 108,196,106 (-)NCBICelera
Cytogenetic Map2E3NCBI
cM Map255.97NCBI
Arl14ep
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83113,896,731 - 113,908,994 (-)NCBIGRCr8
mRatBN7.2393,441,952 - 93,454,282 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl393,443,183 - 93,454,155 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx396,955,937 - 96,965,169 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03105,554,858 - 105,564,090 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03103,366,882 - 103,376,884 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0397,981,506 - 97,993,684 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl397,983,686 - 97,993,684 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03104,595,054 - 104,607,073 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4392,462,491 - 92,472,493 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1392,358,919 - 92,368,921 (-)NCBI
Celera392,491,168 - 92,501,152 (-)NCBICelera
Cytogenetic Map3q33NCBI
Arl14ep
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554768,865,025 - 8,868,935 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554768,858,387 - 8,868,504 (+)NCBIChiLan1.0ChiLan1.0
ARL14EP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11836,961,451 - 36,980,631 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1836,963,979 - 36,980,539 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1836,609,368 - 36,628,568 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01837,599,748 - 37,618,984 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1837,599,451 - 37,618,916 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11837,189,561 - 37,208,767 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01836,765,399 - 36,784,617 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01837,395,365 - 37,414,589 (-)NCBIUU_Cfam_GSD_1.0
Arl14ep
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494734,196,728 - 34,203,726 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365337,318,599 - 7,328,508 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365337,322,297 - 7,328,478 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARL14EP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl230,296,444 - 30,311,521 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1230,293,400 - 30,311,583 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ARL14EP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1134,834,951 - 34,848,618 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl134,833,165 - 34,848,597 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038132,011,951 - 132,027,280 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arl14ep
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476619,396,744 - 19,407,038 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476619,394,384 - 19,405,418 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003830424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSPPAT00000065151   ⟹   ENSPPAP00000042221
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1130,188,013 - 30,203,170 (+)Ensembl
RefSeq Acc Id: XM_003830424   ⟹   XP_003830472
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2932,542,891 - 32,558,291 (+)NCBI
NHGRI_mPanPan11132,547,529 - 32,566,210 (+)NCBI
Mhudiblu_PPA_v01130,296,433 - 30,311,798 (+)NCBI
PanPan1.11130,188,013 - 30,203,170 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003830472 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000042221
  ENSPPAP00000042221.1
RefSeq Acc Id: XP_003830472   ⟸   XM_003830424
- UniProtKB: A0A2R9CJT2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000042221   ⟸   ENSPPAT00000065151

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000043692 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000065151.1 UniProtKB/TrEMBL
InterPro ARF7EP_C UniProtKB/TrEMBL
  ARL14EP UniProtKB/TrEMBL
KEGG Report pps:100980272 UniProtKB/TrEMBL
NCBI Gene ARL14EP ENTREZGENE
PANTHER ARL14 EFFECTOR PROTEIN UniProtKB/TrEMBL
  PTHR46536 UniProtKB/TrEMBL
Pfam ARF7EP_C UniProtKB/TrEMBL
UniProt A0A2R9CJT2 ENTREZGENE, UniProtKB/TrEMBL