TEX51 (testis expressed 51) - Rat Genome Database

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Gene: TEX51 (testis expressed 51) Pan paniscus
Analyze
Symbol: TEX51
Name: testis expressed 51
RGD ID: 12046193
Description: FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC106634492; testis-expressed protein 51; uncharacterized LOC106634492; uncharacterized protein LOC106634492
RGD Orthologs
Human
Mouse
Rat
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21348,741,537 - 48,744,802 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B48,756,516 - 48,759,768 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B33,373,347 - 33,376,577 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B127,569,084 - 127,572,304 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B127,569,106 - 127,572,111 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)

References

Genomics

Comparative Map Data
TEX51
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21348,741,537 - 48,744,802 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B48,756,516 - 48,759,768 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B33,373,347 - 33,376,577 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B127,569,084 - 127,572,304 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B127,569,106 - 127,572,111 (+)Ensemblpanpan1.1panPan2
TEX51
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382126,898,890 - 126,902,097 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2126,898,864 - 126,902,097 (+)EnsemblGRCh38hg38GRCh38
GRCh372127,656,466 - 127,659,673 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map2q14.3NCBI
CHM1_12127,660,126 - 127,660,664 (+)NCBICHM1_1
T2T-CHM13v2.02127,335,881 - 127,339,100 (+)NCBIT2T-CHM13v2.0
Tex51
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391832,591,071 - 32,596,134 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1832,591,136 - 32,605,642 (-)EnsemblGRCm39 Ensembl
GRCm381832,458,018 - 32,462,965 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1832,458,083 - 32,472,589 (-)EnsemblGRCm38mm10GRCm38
Celera1832,940,729 - 32,945,702 (-)NCBICelera
Cytogenetic Map18B1NCBI
Tex51
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81824,367,088 - 24,371,538 (-)NCBIGRCr8
mRatBN7.21824,093,015 - 24,097,223 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1824,093,115 - 24,097,007 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01825,246,286 - 25,250,240 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1825,248,588 - 25,249,950 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01824,961,266 - 24,966,535 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1823,843,494 - 23,847,763 (-)NCBICelera
Cytogenetic Map18p12NCBI
TEX51
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11923,696,058 - 23,700,999 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1923,697,851 - 23,700,984 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1923,938,341 - 23,943,284 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01925,029,413 - 25,034,355 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11923,728,855 - 23,730,859 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01923,930,819 - 23,935,986 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01925,048,280 - 25,053,221 (-)NCBIUU_Cfam_GSD_1.0
Tex51
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530397,307,017 - 97,310,053 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493646944,308,165 - 44,310,523 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TEX51
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1525,466,715 - 25,471,681 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11525,469,048 - 25,471,636 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21529,268,750 - 29,272,205 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TEX51
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1103,329,230 - 3,333,024 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl103,329,744 - 3,332,211 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606119,397,544 - 19,400,727 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tex51
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473217,639,146 - 17,640,397 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014343944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014343945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014343946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014343947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014343948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024927988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024927989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024927990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024927991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055109427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055109428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055109429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055109430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055109433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063595673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063595674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000049059   ⟹   ENSPPAP00000026226
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2B127,569,106 - 127,572,111 (+)Ensembl
RefSeq Acc Id: XM_024927991   ⟹   XP_024783759
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21348,742,234 - 48,744,802 (-)NCBI
NHGRI_mPanPan12B48,757,212 - 48,759,747 (-)NCBI
Mhudiblu_PPA_v02B33,373,347 - 33,376,577 (-)NCBI
PanPan1.12B127,569,084 - 127,572,304 (+)NCBI
Sequence:
RefSeq Acc Id: XM_055109427   ⟹   XP_054965402
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21348,741,538 - 48,744,802 (-)NCBI
NHGRI_mPanPan12B48,756,516 - 48,759,768 (-)NCBI
RefSeq Acc Id: XM_055109428   ⟹   XP_054965403
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21348,741,540 - 48,744,802 (-)NCBI
NHGRI_mPanPan12B48,756,518 - 48,759,747 (-)NCBI
RefSeq Acc Id: XM_055109429   ⟹   XP_054965404
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21348,741,544 - 48,744,802 (-)NCBI
NHGRI_mPanPan12B48,756,522 - 48,759,758 (-)NCBI
RefSeq Acc Id: XM_055109430   ⟹   XP_054965405
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21348,741,538 - 48,744,802 (-)NCBI
NHGRI_mPanPan12B48,756,516 - 48,759,747 (-)NCBI
RefSeq Acc Id: XM_055109433   ⟹   XP_054965408
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21348,741,538 - 48,744,802 (-)NCBI
NHGRI_mPanPan12B48,756,516 - 48,759,747 (-)NCBI
RefSeq Acc Id: XM_063595673   ⟹   XP_063451743
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21348,741,537 - 48,744,802 (-)NCBI
RefSeq Acc Id: XM_063595674   ⟹   XP_063451744
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21348,741,540 - 48,744,802 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_024783759   ⟸   XM_024927991
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: ENSPPAP00000026226   ⟸   ENSPPAT00000049059
RefSeq Acc Id: XP_054965402   ⟸   XM_055109427
- Peptide Label: isoform X3
- UniProtKB: A0A2R9BD61 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054965403   ⟸   XM_055109428
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054965404   ⟸   XM_055109429
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054965408   ⟸   XM_055109433
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054965405   ⟸   XM_055109430
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063451743   ⟸   XM_063595673
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063451744   ⟸   XM_063595674
- Peptide Label: isoform X8


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000036231 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000049059.1 UniProtKB/TrEMBL
NCBI Gene LOC106634492 ENTREZGENE
UniProt A0A2R9BD61 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-08 TEX51  testis expressed 51  LOC106634492  uncharacterized LOC106634492  Symbol and/or name change 5135510 APPROVED