LOC100988742 (GTP-binding nuclear protein Ran) - Rat Genome Database

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Gene: LOC100988742 (GTP-binding nuclear protein Ran) Pan paniscus
Analyze
Symbol: LOC100988742 (Ensembl: RAN)
Name: GTP-binding nuclear protein Ran (Ensembl:RAN, member RAS oncogene family)
RGD ID: 12040152
Description: ENCODES a protein that exhibits G protein activity (inferred); GDP binding (inferred); GTP binding (inferred); INVOLVED IN actin cytoskeleton organization (inferred); GTP metabolic process (inferred); mitotic sister chromatid segregation (inferred); FOUND IN centriole (inferred); chromatin (inferred); cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: GTP-binding nuclear protein Ran pseudogene
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21366,624,445 - 66,625,735 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B66,639,424 - 66,640,701 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B51,239,254 - 51,240,354 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11360,265,822 - 60,266,893 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12132,694,498 - 132,699,668 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034954388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_034954388   ⟹   XP_034810279
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21366,624,445 - 66,625,735 (+)NCBI
NHGRI_mPanPan12B66,639,424 - 66,640,701 (+)NCBI
Mhudiblu_PPA_v02B51,239,254 - 51,240,354 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034810279 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000002104.1
  ENSPPAP00000015741.1
Reference Protein Sequences
RefSeq Acc Id: XP_034810279   ⟸   XM_034954388
- UniProtKB: A0A2R8ZB75 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000009516 ENTREZGENE, UniProtKB/TrEMBL
  ENSPPAG00000030974 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000010357.1 UniProtKB/TrEMBL
  ENSPPAT00000038432.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/TrEMBL
  Ran_GTPase UniProtKB/TrEMBL
  Small_GTP-bd_dom UniProtKB/TrEMBL
  Small_GTPase UniProtKB/TrEMBL
NCBI Gene LOC100988742 ENTREZGENE
PANTHER GTP-BINDING NUCLEAR PROTEIN RAN UniProtKB/TrEMBL
  PTHR24071 UniProtKB/TrEMBL
Pfam Ras UniProtKB/TrEMBL
  Roc UniProtKB/TrEMBL
PRINTS GTPRANTC4 UniProtKB/TrEMBL
PROSITE RAB UniProtKB/TrEMBL
  RAN UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
SMART RAB UniProtKB/TrEMBL
  RAN UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
  RHO UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A2R8ZB75 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9AEK1_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-07-01 LOC100988742  GTP-binding nuclear protein Ran  LOC100988742  GTP-binding nuclear protein Ran pseudogene  Symbol and/or name change 5135510 APPROVED