CENPE (centromere protein E) - Rat Genome Database

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Gene: CENPE (centromere protein E) Pan paniscus
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Symbol: CENPE
Name: centromere protein E
RGD ID: 12036089
Description: ENCODES a protein that exhibits kinetochore binding (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); attachment of spindle microtubules to kinetochore (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); hepatocellular carcinoma (ortholog); primary autosomal recessive microcephaly 13 (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: centromere-associated protein E
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.14106,185,283 - 106,277,229 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4106,185,283 - 106,277,229 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0495,562,005 - 95,654,397 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
CENPE
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.14106,185,283 - 106,277,229 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4106,185,283 - 106,277,229 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0495,562,005 - 95,654,397 (-)NCBIMhudiblu_PPA_v0panPan3
CENPE
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl4103,105,349 - 103,198,445 (-)EnsemblGRCh38hg38GRCh38
GRCh384103,105,811 - 103,198,408 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh374104,026,968 - 104,119,500 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364104,246,412 - 104,339,015 (-)NCBINCBI36hg18NCBI36
Build 344104,384,807 - 104,477,170NCBI
Celera4101,324,102 - 101,416,733 (-)NCBI
Cytogenetic Map4q24NCBI
HuRef499,760,728 - 99,853,482 (-)NCBIHuRef
CHM1_14104,003,436 - 104,096,014 (-)NCBICHM1_1
Cenpe
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393134,918,324 - 134,979,301 (+)NCBIGRCm39mm39
GRCm39 Ensembl3134,918,298 - 134,979,372 (+)Ensembl
GRCm383135,212,563 - 135,273,540 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3135,212,537 - 135,273,611 (+)EnsemblGRCm38mm10GRCm38
MGSCv373134,875,527 - 134,936,504 (+)NCBIGRCm37mm9NCBIm37
MGSCv363135,150,046 - 135,210,626 (+)NCBImm8
Celera3141,624,886 - 141,686,752 (+)NCBICelera
Cytogenetic Map3G3NCBI
cM Map362.55NCBI
Cenpe
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22223,637,035 - 223,695,692 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl2223,636,998 - 223,695,669 (+)Ensembl
Rnor_6.02240,395,974 - 240,454,785 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2240,396,152 - 240,454,747 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02258,915,861 - 258,974,288 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42232,699,627 - 232,758,329 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12232,710,935 - 232,745,069 (+)NCBI
Celera2215,851,430 - 215,910,100 (+)NCBICelera
Cytogenetic Map2q43NCBI
Cenpe
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554965,469,239 - 5,513,574 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554965,468,759 - 5,514,915 (+)NCBIChiLan1.0ChiLan1.0
CENPE
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13224,447,373 - 24,530,407 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3224,447,358 - 24,530,382 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3217,493,941 - 17,576,730 (+)NCBI
ROS_Cfam_1.03224,666,991 - 24,749,806 (-)NCBI
UMICH_Zoey_3.13224,747,174 - 24,766,742 (-)NCBI
UNSW_CanFamBas_1.03224,427,319 - 24,510,138 (-)NCBI
UU_Cfam_GSD_1.03215,352,573 - 15,435,369 (+)NCBI
Cenpe
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530116,845,104 - 16,922,570 (+)NCBI
SpeTri2.0NW_004936520188,601 - 265,904 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CENPE
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8117,889,009 - 117,965,792 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18117,888,968 - 117,965,325 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28126,761,254 - 126,838,996 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CENPE
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1751,212,266 - 51,300,153 (-)NCBIChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603729,724,191 - 29,812,118 (-)NCBIVero_WHO_p1.0
Cenpe
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248304,930,533 - 4,986,437 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000045197   ⟹   ENSPPAP00000022387
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl4106,185,283 - 106,277,229 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000045201   ⟹   ENSPPAP00000022391
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl4106,185,283 - 106,277,229 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000045208   ⟹   ENSPPAP00000022398
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl4106,185,699 - 106,277,140 (-)Ensembl
RefSeq Acc Id: XM_003829965   ⟹   XP_003830013
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.14106,185,283 - 106,277,229 (-)NCBI
Mhudiblu_PPA_v0495,562,005 - 95,654,397 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008955346   ⟹   XP_008953594
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.14106,185,283 - 106,277,229 (-)NCBI
Mhudiblu_PPA_v0495,562,005 - 95,654,397 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008955348   ⟹   XP_008953596
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.14106,185,283 - 106,277,229 (-)NCBI
Mhudiblu_PPA_v0495,562,005 - 95,654,397 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024928658   ⟹   XP_024784426
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.14106,185,283 - 106,277,229 (-)NCBI
Mhudiblu_PPA_v0495,562,005 - 95,654,397 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034958962   ⟹   XP_034814853
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0495,562,005 - 95,654,397 (-)NCBI
RefSeq Acc Id: XM_034958963   ⟹   XP_034814854
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0495,562,005 - 95,654,397 (-)NCBI
Reference Sequences
RefSeq Acc Id: XP_008953596   ⟸   XM_008955348
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_008953594   ⟸   XM_008955346
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_003830013   ⟸   XM_003829965
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_024784426   ⟸   XM_024928658
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_034814854   ⟸   XM_034958963
- Peptide Label: isoform X5
RefSeq Acc Id: XP_034814853   ⟸   XM_034958962
- Peptide Label: isoform X4
RefSeq Acc Id: ENSPPAP00000022387   ⟸   ENSPPAT00000045197
RefSeq Acc Id: ENSPPAP00000022398   ⟸   ENSPPAT00000045208
RefSeq Acc Id: ENSPPAP00000022391   ⟸   ENSPPAT00000045201


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000034329 Ensembl, ENTREZGENE
NCBI Gene CENPE ENTREZGENE