WBP1 (WW domain binding protein 1) - Rat Genome Database

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Gene: WBP1 (WW domain binding protein 1) Pan paniscus
Analyze
Symbol: WBP1
Name: WW domain binding protein 1
RGD ID: 12031400
Description: ENCODES a protein that exhibits WW domain binding (inferred); ASSOCIATED WITH congenital disorder of glycosylation type IIb (ortholog); dystonia (ortholog); genetic disease (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: WW domain-binding protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21251,928,343 - 51,931,181 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A51,931,098 - 51,933,939 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A74,524,722 - 74,527,536 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A76,030,650 - 76,033,520 (+)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
WBP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21251,928,343 - 51,931,181 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A51,931,098 - 51,933,939 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A74,524,722 - 74,527,536 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A76,030,650 - 76,033,520 (+)NCBIpanpan1.1PanPan1.1panPan2
WBP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38274,458,438 - 74,460,881 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl274,458,400 - 74,460,891 (+)EnsemblGRCh38hg38GRCh38
GRCh37274,685,565 - 74,688,008 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36274,539,085 - 74,541,518 (+)NCBINCBI36Build 36hg18NCBI36
Build 34274,597,231 - 74,599,665NCBI
Celera274,516,766 - 74,519,199 (+)NCBICelera
Cytogenetic Map2p13.1NCBI
HuRef274,421,822 - 74,424,313 (+)NCBIHuRef
CHM1_1274,614,944 - 74,617,435 (+)NCBICHM1_1
T2T-CHM13v2.0274,466,998 - 74,469,448 (+)NCBIT2T-CHM13v2.0
Wbp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39683,096,025 - 83,098,442 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl683,096,025 - 83,098,540 (-)EnsemblGRCm39 Ensembl
GRCm38683,119,044 - 83,121,461 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl683,119,044 - 83,121,559 (-)EnsemblGRCm38mm10GRCm38
MGSCv37683,069,038 - 83,071,455 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36683,084,703 - 83,087,081 (-)NCBIMGSCv36mm8
Celera685,101,745 - 85,104,162 (-)NCBICelera
Cytogenetic Map6C3NCBI
cM Map635.94NCBI
Wbp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84117,182,880 - 117,185,279 (-)NCBIGRCr8
mRatBN7.24115,625,168 - 115,627,567 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4115,625,168 - 115,627,624 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4121,101,775 - 121,104,174 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04116,876,967 - 116,879,366 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04115,491,541 - 115,493,940 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04113,951,873 - 113,954,272 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4113,951,870 - 113,954,297 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl4114,817,576 - 114,820,127 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04178,636,944 - 178,639,343 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44117,331,154 - 117,333,553 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14117,575,634 - 117,578,153 (-)NCBI
Celera4104,619,367 - 104,621,766 (-)NCBICelera
Cytogenetic Map4q34NCBI
Wbp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542411,317,605 - 11,324,464 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542411,321,393 - 11,323,651 (-)NCBIChiLan1.0ChiLan1.0
WBP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11748,671,039 - 48,673,817 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1748,671,152 - 48,673,459 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1748,312,926 - 48,315,729 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01749,530,282 - 49,533,066 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1749,530,395 - 49,532,702 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11748,547,403 - 48,550,179 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01748,614,163 - 48,616,966 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01749,171,872 - 49,174,699 (-)NCBIUU_Cfam_GSD_1.0
Wbp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629210,053,827 - 10,056,475 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936556681,590 - 688,056 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936556681,405 - 684,071 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WBP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl368,582,152 - 68,584,601 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1368,582,151 - 68,584,706 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2371,837,606 - 71,840,162 (+)NCBISscrofa10.2Sscrofa10.2susScr3
WBP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11432,816,530 - 32,819,388 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1432,812,065 - 32,818,826 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604579,351,153 - 79,354,110 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Wbp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474929,040,983 - 29,048,127 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474929,045,584 - 29,048,020 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: XM_003810346   ⟹   XP_003810394
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21251,928,343 - 51,931,181 (-)NCBI
NHGRI_mPanPan12A51,931,098 - 51,933,939 (-)NCBI
Mhudiblu_PPA_v02A74,524,722 - 74,527,536 (+)NCBI
PanPan1.12A76,030,650 - 76,033,520 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008962696   ⟹   XP_008960944
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21251,928,343 - 51,931,181 (-)NCBI
NHGRI_mPanPan12A51,931,098 - 51,933,504 (-)NCBI
Mhudiblu_PPA_v02A74,525,139 - 74,527,536 (+)NCBI
PanPan1.12A76,030,650 - 76,033,520 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008962697   ⟹   XP_008960945
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21251,928,343 - 51,931,181 (-)NCBI
NHGRI_mPanPan12A51,931,098 - 51,933,939 (-)NCBI
Mhudiblu_PPA_v02A74,524,722 - 74,527,536 (+)NCBI
PanPan1.12A76,030,650 - 76,033,520 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008962699   ⟹   XP_008960947
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21251,928,343 - 51,931,181 (-)NCBI
NHGRI_mPanPan12A51,931,098 - 51,933,437 (-)NCBI
Mhudiblu_PPA_v02A74,525,161 - 74,527,536 (+)NCBI
PanPan1.12A76,030,650 - 76,033,520 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008962702   ⟹   XP_008960950
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21251,928,343 - 51,931,181 (-)NCBI
NHGRI_mPanPan12A51,931,098 - 51,933,939 (-)NCBI
Mhudiblu_PPA_v02A74,524,722 - 74,527,536 (+)NCBI
PanPan1.12A76,030,650 - 76,033,520 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014343857   ⟹   XP_014199343
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21251,928,343 - 51,931,181 (-)NCBI
NHGRI_mPanPan12A51,931,098 - 51,933,477 (-)NCBI
Mhudiblu_PPA_v02A74,525,169 - 74,527,536 (+)NCBI
PanPan1.12A76,030,650 - 76,033,520 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014343858   ⟹   XP_014199344
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21251,928,343 - 51,931,181 (-)NCBI
NHGRI_mPanPan12A51,931,098 - 51,933,939 (-)NCBI
Mhudiblu_PPA_v02A74,524,722 - 74,527,536 (+)NCBI
PanPan1.12A76,030,650 - 76,033,520 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034953420   ⟹   XP_034809311
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21251,928,343 - 51,931,181 (-)NCBI
NHGRI_mPanPan12A51,931,098 - 51,933,939 (-)NCBI
Mhudiblu_PPA_v02A74,524,722 - 74,527,536 (+)NCBI
RefSeq Acc Id: XP_008960944   ⟸   XM_008962696
- Peptide Label: isoform X1
- UniProtKB: A0A2R9B6D5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008960947   ⟸   XM_008962699
- Peptide Label: isoform X3
- UniProtKB: A0A2R9B6D5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_014199343   ⟸   XM_014343857
- Peptide Label: isoform X5
- UniProtKB: A0A2R9BDJ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003810394   ⟸   XM_003810346
- Peptide Label: isoform X7
- UniProtKB: A0A2R9BDJ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008960945   ⟸   XM_008962697
- Peptide Label: isoform X2
- UniProtKB: A0A2R9B6D5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_014199344   ⟸   XM_014343858
- Peptide Label: isoform X6
- UniProtKB: A0A2R9BDJ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008960950   ⟸   XM_008962702
- Peptide Label: isoform X8
- UniProtKB: A0A2R9BDJ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034809311   ⟸   XM_034953420
- Peptide Label: isoform X4
- UniProtKB: A0A2R9B6D5 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000035706 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000047978.1 UniProtKB/TrEMBL
  ENSPPAT00000047980.1 UniProtKB/TrEMBL
InterPro WBP1-like UniProtKB/TrEMBL
NCBI Gene WBP1 ENTREZGENE
PANTHER PTHR16209 UniProtKB/TrEMBL
  WW DOMAIN-BINDING PROTEIN 1 UniProtKB/TrEMBL
Pfam WBP-1 UniProtKB/TrEMBL
UniProt A0A2R9B6D5 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9BDJ2 ENTREZGENE, UniProtKB/TrEMBL