FGF23 (fibroblast growth factor 23) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Pathways
Gene: FGF23 (fibroblast growth factor 23) Pan paniscus
Analyze
Symbol: FGF23
Name: fibroblast growth factor 23
RGD ID: 12030058
Description: ENCODES a protein that exhibits fibroblast growth factor receptor binding (inferred); growth factor activity (inferred); type 1 fibroblast growth factor receptor binding (inferred); INVOLVED IN cellular response to interleukin-6 (ortholog); cellular response to leptin stimulus (ortholog); cellular response to parathyroid hormone stimulus (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH autosomal dominant hypophosphatemic rickets (ortholog); calcinosis (ortholog); chronic kidney disease (ortholog); FOUND IN extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2109,910,396 - 9,919,599 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1129,902,683 - 9,916,357 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0124,479,116 - 4,488,797 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1124,400,802 - 4,412,000 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl124,400,802 - 4,412,000 (-)EnsemblpanPan2panpan1.1
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
FGF23
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2109,910,396 - 9,919,599 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1129,902,683 - 9,916,357 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0124,479,116 - 4,488,797 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1124,400,802 - 4,412,000 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl124,400,802 - 4,412,000 (-)EnsemblpanPan2panpan1.1
FGF23
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38124,368,227 - 4,379,712 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl124,368,227 - 4,379,712 (-)Ensemblhg38GRCh38
GRCh37124,477,393 - 4,488,878 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36124,347,654 - 4,359,155 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34124,347,653 - 4,359,155NCBI
Celera126,099,463 - 6,110,952 (-)NCBICelera
Cytogenetic Map12p13.32NCBI
HuRef124,334,034 - 4,345,523 (-)NCBIHuRef
CHM1_1124,477,002 - 4,488,504 (-)NCBICHM1_1
T2T-CHM13v2.0124,375,010 - 4,386,480 (-)NCBIT2T-CHM13v2.0
Fgf23
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396127,049,865 - 127,059,257 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6127,049,865 - 127,058,371 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm386127,072,902 - 127,082,296 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6127,072,902 - 127,081,408 (+)Ensemblmm10GRCm38
MGSCv376127,022,920 - 127,031,426 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv366127,038,593 - 127,046,844 (+)NCBIMGSCv36mm8
Celera6128,754,493 - 128,762,966 (+)NCBICelera
Cytogenetic Map6F3NCBI
cM Map661.92NCBI
Fgf23
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84161,600,439 - 161,609,991 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl4161,600,383 - 161,609,991 (+)EnsemblGRCr8
mRatBN7.24159,914,267 - 159,923,821 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4159,914,272 - 159,923,821 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx4166,144,203 - 166,151,883 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04161,927,113 - 161,934,785 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04160,561,155 - 160,568,833 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.04159,622,404 - 159,630,082 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4159,622,404 - 159,630,082 (+)Ensemblrn6Rnor6.0
Rnor_5.04231,971,932 - 231,990,610 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.44163,468,604 - 163,476,325 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera4148,629,372 - 148,637,127 (+)NCBICelera
RGSC_v3.14163,713,539 - 163,721,261 (+)NCBI
Cytogenetic Map4q42NCBI
Fgf23
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554132,182,459 - 2,192,279 (-)Ensembl
ChiLan1.0NW_0049554132,182,459 - 2,192,279 (-)NCBIChiLan1.0ChiLan1.0
FGF23
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12740,501,655 - 40,511,785 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2740,501,731 - 40,509,766 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha276,170,287 - 6,180,384 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02740,857,426 - 40,867,540 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2740,857,191 - 40,866,460 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12740,746,195 - 40,756,275 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02740,771,149 - 40,781,234 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0275,580,979 - 5,591,077 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Fgf23
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945104,622,105 - 104,630,138 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366064,555,034 - 4,561,961 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366064,555,034 - 4,561,961 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FGF23
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl566,028,776 - 66,038,740 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1566,028,591 - 66,038,078 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2568,250,524 - 68,260,006 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FGF23
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1114,398,318 - 4,408,415 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl114,398,675 - 4,407,209 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660633,836,189 - 3,845,260 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fgf23
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248601,479,303 - 1,486,323 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248601,478,712 - 1,486,808 (-)NCBIHetGla 1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003820339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000044372   ⟹   ENSPPAP00000021569
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl124,400,802 - 4,412,000 (-)Ensembl
RefSeq Acc Id: XM_003820339   ⟹   XP_003820387
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2109,910,396 - 9,919,599 (-)NCBI
NHGRI_mPanPan1129,902,683 - 9,916,357 (-)NCBI
Mhudiblu_PPA_v0124,479,116 - 4,488,797 (-)NCBI
PanPan1.1124,400,802 - 4,412,000 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003820387 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000021569.1
  ENSPPAP00050004740
RefSeq Acc Id: XP_003820387   ⟸   XM_003820339
- UniProtKB: A0A2R9AWI6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000021569   ⟸   ENSPPAT00000044372


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000034005 Ensembl, UniProtKB/TrEMBL
  ENSPPAG00050003762 ENTREZGENE
Ensembl Transcript ENSPPAT00000044372.1 UniProtKB/TrEMBL
  ENSPPAT00050007941 ENTREZGENE
Gene3D-CATH 2.80.10.50 UniProtKB/TrEMBL
InterPro Fibroblast_GF_fam UniProtKB/TrEMBL
  IL1/FGF UniProtKB/TrEMBL
KEGG Report pps:100989835 UniProtKB/TrEMBL
NCBI Gene FGF23 ENTREZGENE
PANTHER PTHR11486 UniProtKB/TrEMBL
Pfam FGF UniProtKB/TrEMBL
PRINTS IL1HBGF UniProtKB/TrEMBL
SMART FGF UniProtKB/TrEMBL
Superfamily-SCOP SSF50353 UniProtKB/TrEMBL
UniProt A0A2R9AWI6 ENTREZGENE, UniProtKB/TrEMBL