KHK (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 12 | 99,415,724 - 99,428,805 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2A | 99,419,692 - 99,432,773 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2A | 27,085,758 - 27,099,768 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2A | 27,174,896 - 27,189,308 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2A | 27,174,896 - 27,189,308 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
KHK (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 2 | 27,086,772 - 27,100,762 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 27,086,772 - 27,100,762 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 27,309,640 - 27,323,630 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 27,163,115 - 27,177,123 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 2 | 27,221,770 - 27,235,252 | NCBI | | | | | Celera | 2 | 27,155,955 - 27,169,965 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | p23.3 | NCBI | | | | | HuRef | 2 | 27,051,765 - 27,065,924 (+) | NCBI | | HuRef | | | CHM1_1 | 2 | 27,239,525 - 27,253,535 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 27,128,445 - 27,142,438 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Khk (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 5 | 31,078,780 - 31,088,592 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 31,078,775 - 31,088,592 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 30,921,436 - 30,931,248 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 30,921,431 - 30,931,248 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 31,224,268 - 31,233,619 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 31,198,476 - 31,207,827 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 28,401,689 - 28,411,041 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | B1 | NCBI | | | | | cM Map | 5 | 16.9 | NCBI | | | | |
|
Khk (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 6 | 31,165,246 - 31,175,779 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 25,445,298 - 25,455,834 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 25,445,300 - 25,455,717 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 25,745,610 - 25,755,833 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 26,061,474 - 26,071,697 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 25,540,659 - 25,550,901 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 26,810,577 - 26,821,013 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 26,810,579 - 26,820,959 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 36,626,192 - 36,636,617 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 25,428,263 - 25,438,497 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 6 | 25,431,217 - 25,441,313 (-) | NCBI | | | | | Celera | 6 | 24,935,944 - 24,946,180 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q14 | NCBI | | | | |
|
Khk (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955469 | 9,058,095 - 9,071,091 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955469 | 9,058,095 - 9,071,091 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
KHK (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 17 | 21,079,907 - 21,092,510 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 17 | 21,079,907 - 21,092,510 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 17 | 20,971,570 - 20,984,321 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 17 | 21,399,371 - 21,413,177 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 17 | 21,399,398 - 21,413,176 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 17 | 21,086,630 - 21,099,927 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 17 | 21,097,714 - 21,111,029 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 17 | 21,144,127 - 21,157,862 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Khk (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024406292 | 65,384,457 - 65,395,298 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936493 | 5,441,165 - 5,455,176 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936493 | 5,444,284 - 5,455,100 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
KHK (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 3 | 112,021,108 - 112,031,620 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 3 | 112,021,163 - 112,031,615 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 3 | 119,019,718 - 119,030,168 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
KHK (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 14 | 80,518,049 - 80,531,643 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 14 | 80,514,825 - 80,531,653 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666045 | 31,608,128 - 31,621,763 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Khk (Heterocephalus glaber - naked mole-rat) |
|