ARSI (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 4 | 145,524,965 - 145,532,229 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 5 | 143,664,513 - 143,671,782 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 5 | 145,720,651 - 145,763,532 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 5 | 151,725,650 - 151,732,271 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 5 | 151,725,264 - 151,732,277 (-) | Ensembl | panpan1.1 | | panPan2 | |
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ARSI (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 5 | 150,296,343 - 150,302,905 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 150,296,343 - 150,339,307 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 5 | 149,675,906 - 149,682,468 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 149,656,970 - 149,662,129 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 5 | 145,757,304 - 145,763,920 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q32 | NCBI | | | | | HuRef | 5 | 144,823,861 - 144,830,426 (-) | NCBI | | HuRef | | | CHM1_1 | 5 | 149,108,498 - 149,115,114 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 150,832,882 - 150,839,444 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Arsi (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 18 | 61,045,063 - 61,051,633 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 18 | 61,044,852 - 61,051,633 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 18 | 60,911,991 - 60,919,506 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 18 | 60,911,780 - 60,918,561 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 18 | 61,071,894 - 61,077,422 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 18 | 61,037,609 - 61,043,137 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 18 | 62,199,151 - 62,204,678 (+) | NCBI | | Celera | | | Cytogenetic Map | 18 | E1 | NCBI | | | | | cM Map | 18 | 34.41 | NCBI | | | | |
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Arsi (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 18 | 56,634,556 - 56,642,168 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 18 | 54,364,160 - 54,371,772 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 18 | 54,364,088 - 54,371,767 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 18 | 56,453,186 - 56,459,769 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 18 | 57,167,793 - 57,174,376 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 18 | 54,988,302 - 54,994,881 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 18 | 56,180,089 - 56,186,068 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 18 | 56,180,089 - 56,186,068 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 18 | 55,414,598 - 55,421,354 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 18 | 56,864,873 - 56,871,452 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 18 | 56,936,843 - 56,943,684 (+) | NCBI | | | | | Celera | 18 | 52,518,894 - 52,525,437 (+) | NCBI | | Celera | | | Cytogenetic Map | 18 | q12.1 | NCBI | | | | |
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Arsi (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955415 | 4,234,485 - 4,240,995 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955415 | 4,234,491 - 4,240,970 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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ARSI (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 4 | 58,788,141 - 58,793,542 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 4 | 58,787,283 - 58,793,542 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 4 | 58,554,373 - 58,559,774 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 4 | 59,268,985 - 59,274,386 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 4 | 59,268,473 - 59,274,576 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 4 | 59,057,718 - 59,063,119 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 4 | 59,172,012 - 59,177,407 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 4 | 59,703,267 - 59,708,669 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Arsi (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024407213 | 143,050,773 - 143,057,511 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936504 | 4,624,945 - 4,631,487 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936504 | 4,624,949 - 4,631,482 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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ARSI (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 23 | 52,905,950 - 52,913,404 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 23 | 52,906,825 - 52,911,986 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666034 | 24,804,188 - 24,811,099 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Arsi (Heterocephalus glaber - naked mole-rat) |
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