DMRTC2 (DMRT like family C2) - Rat Genome Database

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Gene: DMRTC2 (DMRT like family C2) Pan paniscus
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Symbol: DMRTC2
Name: DMRT like family C2
RGD ID: 12026838
Description: ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN male meiosis I (ortholog); positive regulation of histone H3-K9 dimethylation (ortholog); positive regulation of histone H3-K9 trimethylation (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN XY body (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: doublesex- and mab-3-related transcription factor C2; doublesex- and mab-3-related transcription factor C2-like; LOC100990334
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11947,239,166 - 47,246,713 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v01938,735,791 - 38,741,017 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
XY body  (ISO)

Molecular Function

References

Genomics

Comparative Map Data
DMRTC2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11947,239,166 - 47,246,713 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v01938,735,791 - 38,741,017 (+)NCBIMhudiblu_PPA_v0panPan3
DMRTC2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1941,844,743 - 41,852,333 (+)EnsemblGRCh38hg38GRCh38
GRCh381941,844,743 - 41,852,333 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371942,349,105 - 42,356,401 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361947,040,926 - 47,048,238 (+)NCBINCBI36hg18NCBI36
Build 341947,040,863 - 47,048,235NCBI
Celera1939,148,773 - 39,156,084 (+)NCBI
Cytogenetic Map19q13.2NCBI
HuRef1938,780,459 - 38,787,770 (+)NCBIHuRef
CHM1_11942,350,558 - 42,357,865 (+)NCBICHM1_1
Dmrtc2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39724,569,242 - 24,577,080 (+)NCBIGRCm39mm39
GRCm39 Ensembl724,569,482 - 24,577,076 (+)Ensembl
GRCm38724,869,817 - 24,877,655 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl724,870,057 - 24,877,651 (+)EnsemblGRCm38mm10GRCm38
MGSCv37725,655,076 - 25,662,670 (+)NCBIGRCm37mm9NCBIm37
MGSCv36724,578,820 - 24,586,407 (+)NCBImm8
Celera719,485,959 - 19,493,548 (+)NCBICelera
Cytogenetic Map7A3NCBI
Dmrtc2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2180,466,259 - 80,473,883 (+)NCBImRatBN7.2
Rnor_6.0 Ensembl181,736,335 - 81,741,345 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl916,815,498 - 16,823,064 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0181,734,256 - 81,741,419 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0182,991,217 - 82,998,380 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4180,161,778 - 80,168,956 (+)NCBIRGSC3.4rn4RGSC3.4
Celera174,914,975 - 74,922,177 (+)NCBICelera
Cytogenetic Map1q21NCBI
Dmrtc2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955555983,272 - 988,950 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955555983,451 - 989,044 (-)NCBIChiLan1.0ChiLan1.0
DMRTC2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11112,434,046 - 112,439,712 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1112,434,485 - 112,439,088 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1111,870,364 - 111,876,041 (-)NCBI
ROS_Cfam_1.01113,057,980 - 113,063,658 (-)NCBI
UMICH_Zoey_3.11112,611,346 - 112,617,022 (-)NCBI
UNSW_CanFamBas_1.01112,247,294 - 112,252,972 (-)NCBI
UU_Cfam_GSD_1.01113,173,978 - 113,179,655 (-)NCBI
Dmrtc2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934916,235,240 - 16,240,623 (-)NCBI
SpeTri2.0NW_004936706582,541 - 586,735 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DMRTC2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl649,871,136 - 50,016,315 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1650,011,312 - 50,017,513 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2646,065,161 - 46,070,822 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DMRTC2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1636,052,497 - 36,060,277 (+)NCBI
ChlSab1.1 Ensembl636,055,088 - 36,059,830 (+)Ensembl
Vero_WHO_p1.0NW_02366607314,287,254 - 14,295,092 (+)NCBI
Dmrtc2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624907825,010 - 830,770 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_034946109   ⟹   XP_034802000
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01938,735,791 - 38,740,396 (+)NCBI
RefSeq Acc Id: XM_034946110   ⟹   XP_034802001
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01938,735,791 - 38,741,017 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034802000 (Get FASTA)   NCBI Sequence Viewer  
  XP_034802001 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_034802001   ⟸   XM_034946110
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034802000   ⟸   XM_034946109
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
NCBI Gene DMRTC2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-06-11 DMRTC2  DMRT like family C2  LOC100990334  doublesex- and mab-3-related transcription factor C2-like  Data Merged 737654 PROVISIONAL