TOP3B (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 23 | 31,498,751 - 31,524,557 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 22 | 34,047,630 - 34,073,423 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 22 | 4,076,295 - 4,102,086 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 22 | 20,557,248 - 20,583,307 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 22 | 20,557,248 - 20,583,464 (-) | Ensembl | panpan1.1 | | panPan2 | |
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TOP3B (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 22 | 21,957,025 - 21,982,787 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 22 | 21,957,025 - 21,982,813 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 22 | 22,311,397 - 22,337,184 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 22 | 20,641,403 - 20,667,147 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 22 | 20,635,957 - 20,661,701 | NCBI | | | | | Celera | 22 | 6,128,944 - 6,154,663 (-) | NCBI | | Celera | | | Cytogenetic Map | 22 | q11.22 | NCBI | | | | | HuRef | 22 | 5,268,479 - 5,294,196 (-) | NCBI | | HuRef | | | CHM1_1 | 22 | 22,311,501 - 22,337,220 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 22 | 22,370,556 - 22,396,320 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Top3b (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 16 | 16,688,587 - 16,710,850 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 16,688,600 - 16,710,854 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 16,870,722 - 16,892,986 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 16,870,736 - 16,892,990 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 16 | 16,870,984 - 16,893,079 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 16 | 16,784,454 - 16,806,549 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 16 | 17,442,801 - 17,464,977 (+) | NCBI | | Celera | | | Cytogenetic Map | 16 | A3 | NCBI | | | | | cM Map | 16 | 10.46 | NCBI | | | | |
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Top3b (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 11 | 97,601,223 - 97,629,678 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 11 | 84,097,018 - 84,125,474 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 11 | 84,097,026 - 84,125,392 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 11 | 92,821,137 - 92,849,383 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 11 | 85,482,270 - 85,510,510 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 11 | 84,535,862 - 84,564,108 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 11 | 88,346,305 - 88,374,896 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 11 | 88,346,313 - 88,374,679 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 91,401,389 - 91,429,964 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 11 | 86,116,936 - 86,145,314 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 11 | 86,157,538 - 86,185,850 (-) | NCBI | | | | | Celera | 11 | 82,851,647 - 82,880,025 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q23 | NCBI | | | | |
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Top3b (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955442 | 17,200,453 - 17,225,335 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955442 | 17,201,079 - 17,223,824 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TOP3B (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 26 | 31,198,371 - 31,223,133 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 26 | 31,198,382 - 31,215,134 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 26 | 31,154,388 - 31,178,817 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 26 | 32,604,302 - 32,628,806 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 26 | 32,604,310 - 32,628,701 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 26 | 30,652,585 - 30,677,122 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 26 | 30,276,606 - 30,301,211 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 26 | 31,367,160 - 31,391,836 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Top3b (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405118 | 140,971,807 - 140,997,296 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936619 | 1,756,791 - 1,785,953 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936619 | 1,756,829 - 1,782,063 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TOP3B (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 14 | 50,020,509 - 50,037,856 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 50,020,412 - 50,037,854 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 53,462,935 - 53,480,381 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TOP3B (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 19 | 4,137,823 - 4,163,860 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 19 | 4,137,862 - 4,166,436 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666085 | 2,836,805 - 2,865,520 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Top3b (Heterocephalus glaber - naked mole-rat) |
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