NUDT12 (nudix hydrolase 12) - Rat Genome Database

Name: NUDT12
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: NUDT12 (nudix hydrolase 12) Pan paniscus

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Symbol:

NUDT12

Name:

nudix hydrolase 12

RGD ID:

12012987

Description:

ENCODES a protein that exhibits magnesium ion binding (ortholog); RNA NAD-cap (NMN-forming) hydrolase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); mRNA catabolic process (ortholog); NAD catabolic process (ortholog); PARTICIPATES IN niacin metabolic pathway; ASSOCIATED WITH familial adenomatous polyposis 1 (ortholog); Hereditary Neoplastic Syndromes (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

NAD-capped RNA hydrolase NUDT12; peroxisomal NADH pyrophosphatase NUDT12

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NUDT12 (nudix hydrolase 12)	NCBI	Ortholog
Mus musculus (house mouse):	Nudt12 (nudix hydrolase 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Nudt12 (nudix hydrolase 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Nudt12 (nudix hydrolase 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NUDT12 (nudix hydrolase 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Nudt12 (nudix hydrolase 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NUDT12 (nudix hydrolase 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NUDT12 (nudix hydrolase 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nudt12 (nudix hydrolase 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	98,832,811 - 98,846,787 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	96,986,459 - 97,000,835 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	98,903,740 - 98,917,763 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	104,603,701 - 104,617,927 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	104,601,373 - 104,617,925 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

familial adenomatous polyposis 1 (ISO)

Hereditary Neoplastic Syndromes (ISO)

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

circadian regulation of gene expression (ISO)

mRNA catabolic process (ISO)

mRNA methylguanosine-cap decapping (IEA)

NAD catabolic process (IEA,ISO)

NAD-cap decapping (IEA)

NADH metabolic process (IEA)

NADP catabolic process (IEA,ISO)

Cellular Component

cytoplasm (IEA)

cytosol (IEA)

nucleus (IEA)

peroxisome (IEA)

Molecular Function

hydrolase activity (IEA)

magnesium ion binding (ISO)

metal ion binding (IEA)

NAD+ diphosphatase activity (IEA)

NADH pyrophosphatase activity (IEA)

phosphodiesterase decapping endonuclease activity (IEA)

protein binding (ISO)

RNA NAD-cap (NMN-forming) hydrolase activity (ISO)

zinc ion binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

niacin metabolic pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

NUDT12
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	98,832,811 - 98,846,787 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	96,986,459 - 97,000,835 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	98,903,740 - 98,917,763 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	104,603,701 - 104,617,927 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	104,601,373 - 104,617,925 (-)	Ensembl	panpan1.1		panPan2

NUDT12
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	103,548,855 - 103,562,789 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	103,548,855 - 103,562,790 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	102,884,556 - 102,898,490 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	102,912,455 - 102,926,389 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	102,912,455 - 102,926,389	NCBI
Celera	5	98,832,394 - 98,846,327 (-)	NCBI		Celera
Cytogenetic Map	5	q21.2	NCBI
HuRef	5	98,066,154 - 98,080,094 (-)	NCBI		HuRef
CHM1_1	5	102,317,764 - 102,331,705 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	104,057,169 - 104,071,102 (-)	NCBI		T2T-CHM13v2.0

Nudt12
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	59,307,104 - 59,320,317 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	59,306,613 - 59,320,367 (-)	Ensembl		GRCm39 Ensembl
GRCm38	17	59,000,107 - 59,013,367 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	58,999,618 - 59,013,372 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	59,140,824 - 59,152,745 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	58,686,732 - 58,698,653 (-)	NCBI		MGSCv36	mm8
Celera	17	63,340,740 - 63,352,661 (-)	NCBI		Celera
Cytogenetic Map	17	D	NCBI
cM Map	17	30.64	NCBI

Nudt12
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	106,188,930 - 106,202,340 (-)	NCBI		GRCr8
mRatBN7.2	9	98,741,627 - 98,755,039 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	98,742,360 - 98,755,039 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	107,157,934 - 107,170,738 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	112,285,705 - 112,298,509 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	110,629,306 - 110,642,104 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	105,680,603 - 105,693,374 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	105,680,670 - 105,693,357 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	105,282,066 - 105,294,901 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	97,551,943 - 97,565,919 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	97,763,808 - 97,773,230 (-)	NCBI
Celera	9	96,183,688 - 96,196,456 (-)	NCBI		Celera
Cytogenetic Map	9	q36	NCBI

Nudt12
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955418	10,459,638 - 10,474,124 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955418	10,459,644 - 10,474,124 (+)	NCBI	ChiLan1.0	ChiLan1.0

NUDT12
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	7,693,903 - 7,708,930 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	7,696,505 - 7,724,769 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	9,096,599 - 9,111,624 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	7,580,872 - 7,595,974 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	7,580,961 - 7,595,765 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	7,523,258 - 7,538,243 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	7,541,652 - 7,556,628 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	7,701,088 - 7,716,081 (+)	NCBI		UU_Cfam_GSD_1.0

Nudt12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	162,779,449 - 162,793,749 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936523	964,813 - 979,250 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936523	964,858 - 979,118 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NUDT12
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	109,045,592 - 109,059,616 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	109,044,946 - 109,059,721 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	113,204,432 - 113,216,169 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NUDT12
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	6,980,848 - 6,995,193 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	6,978,704 - 6,994,660 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666036	7,322,532 - 7,336,519 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nudt12
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624743	21,701,158 - 21,717,123 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624743	21,702,453 - 21,716,805 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003828308	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003828309	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008953678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034960315	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034960316	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055112515	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055112516	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057302319	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000050220 ⟹ ENSPPAP00000027380

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	5	104,601,373 - 104,615,084 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000050221 ⟹ ENSPPAP00000027381

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	5	104,603,701 - 104,617,925 (-)	Ensembl

RefSeq Acc Id:

XM_003828308 ⟹ XP_003828356

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	98,832,811 - 98,846,786 (-)	NCBI
NHGRI_mPanPan1	5	96,986,459 - 97,000,832 (-)	NCBI
Mhudiblu_PPA_v0	5	98,903,740 - 98,917,762 (-)	NCBI
PanPan1.1	5	104,603,701 - 104,617,925 (-)	NCBI

Sequence:

show sequence

TGTATTGGAGAGAGGGCTAGGAGATGGGTGGGAGACGCTGGAAAATTTAAAATCGTTTCCTCAG
GCCTACAGTTTTCCGATCGCCTGCACCACGTTCTATCTACACATCACAGTCTCAGGAGAAGGAT
TTTCAGCCCTTCATTCAGCGCCAATCCTTTAGACCGCGATCTCTCCCGCGCCGGCTCCCAAACA
CTTCCACCCGCAATCTCCACCCCTTCTCACTTGCGCACAACCTGTGGGCTTCAAACTACATCTC
CCATAAAACCGCGGGAAGGCCCCCCTCCCGCCCCCGGATCTCCACCGGAAGTCGGGAAGGCTGC
ATCCGGCTCCAGGAAAAGCGAGTGGGATATCCCAATCTTTGGACTGCATCGTGGTTGCCTCTAG
TGTGGTCACCTTTGGGAAGAAATGTCTTCTGTAAAAAGAAGTCCGAAGCAAGAAATAGTTACTC
AGTTTCACTGTTCAGCTGCTGAAGGAGATATTGCCAAGTTAACAGGAATACTCAGTCATTCTCC
ATCTCTTCTCAATGAAACTTCTGAAAATGGCTGGACTGCTTTAATGTATGCGGCAAGGAATGGG
CACCCAGAGATTGTCCAATTTCTGCTTGAGAAAGGGTGTGACAGATCAATTGTCAATAAATCAA
GGCAGACTGCACTGGATATTGCTGTATTTTGGGGTTATAAGCATATAGCTAATTTACTAGCTAC
TGCTAAAGGTGGGAAGAAGCCTTGGTTCCTAACGAATGAAGTGGAAGAATGTGAAAATTATTTT
AGCAAAACACTACTGGACCGGAAAAGTGAAAAGAGAAATAATTCTGACTGGCTGCTAGCTAAAG
AAAGCCATCCAGCCACAGTTTTTATTCTTTTCTCAGATTTAAATCCCTTGGTTACTCTAGGTGG
CAATAAAGAAAGTTTCCAACAGCCAGAAGTTAGGCTTTGTCAGCTGAACTACACAGATATAAAG
GATTATTTGGCCCAGCCTGAGAAGATCACCTTGATTTTTCTTGGAGTAGAACTTGAAATAAAAG
ACAAGCTACTTAATTATGCTGGTGAAGTCCCGAGAGAGGAGGAAGATGGATTGGTTGCCTGGTT
TGCTCTAGGTATAGATCCTATTGCTGCTGAAGAATTCAAGCAAAGACATGAAAATTGTTACTTT
CTTCATCCTCCTATGCCAGCCCTTCTGCAATTGAAAGAAAAAGAAGCTGGGGTTGTAGCTCAAG
CAAGATCTGTTCTTGCCTGGCACAGTCGACACAAGTTTTGCCCAACCTGTGGAAATGCAACTAA
AATTGAAGAAGGTGGCTATAAGAGACTATGTTTAAAAGAAGACTGTCCTAGTCTCAATGGCGTC
CATAATACCTCATACCCAAGAGTTGATCCAGTAGTGATCATGCAAGTTATTCATCCAGATGGGA
CCAAATGCCTTTTAGGCAGGCAGAAAAGATTTCCCCCAGGCATGTTTACTTGCCTTGCTGGATT
TATTGAGCCTGGAGAGACAATAGAAGATGCTGTTAGGAGAGAAGTAGAAGAGGAAAGTGGAGTC
AAAGTTGGCCATGTTCAGTATGTCGCTTGTCAACCATGGCCAATGCCTTCCTCCTTAATGATTG
GTTGCTTAGCTCTGGCAGTGTCTACAGAAATTAAAGTTGACAAGAATGAAATAGAGGATGCCCG
CTGGTTCACTAGAGAACAGGTCCTGGATGTTCTGACCAAAGGGAAGCAGCAGGCATTCTTTGTG
CCACCAAGCCGAGCTATTGCACATCAATTAATCAAACACTGGATTAGAATAAATCCTAATCTCT
AAATCTAAGAACTAAGCTTTGAGTATTATTTAATAATTTCTAATAACACTCATTCCTCAAGTGA
TATTAGAGATTATTCAGTATTCTTGAGAGTGTCACAACACAAAATACGATGTTGGGTTTTCAAA
ATATTTTCAAAATGTTCTTCTGTCTTAATCACAAATTCATATTTTTACACATTTTTACAATATT
GCCTCAGATTAGGTTAAATTTGGGTCAGTCTTCTCTGAACTTTTTCTCTCTTGGTTTCTTTTCT
TCCGTCACAGTTTTATCTCACAAAACCATTTTTCTAATAAGAGAAAATCATGTTGGAAAGATGT
TCTAGAAATGTGCATAAATTTCAGTGCCTCTTGTAAGCATTAAACTGATGACGAAGAAAGTTCC
TGATTTGAGAAATGAAACAAAGTAATTTTAATGAATTTTTAACTTGTATTAGCTTGAGTTAGCT
GGCATTAATTTTTTAGTCCTTTTGTTACCTTTAAGTTGTCAATATATGGTTTTTGTTCATCTCC
CCATTGCAGTCCCACTTGCTCTTTCCTGGGAGTTCCATTGTTCTGGCAGTGGAGGTGTTATAGT
GTCGCCACTCGTCCAATTTGACCAGTGTTAAGAATTTTCTAATTTAATAATTTAATAGTGATCT
CAATACCACACCCTCATGGAAGGAGAAAAGCATACTATTATATCTGGGACCTCTCTTTTAGACC
TAAAATTAATTAACATATCTACTTATATGTTACTTATACCTAAAGCTGTTATTAAGACAAACCA
AGATTCTCTGCTTTTGCACTGAAATTAAACTTGAAAGGAATTGTCCTCAAAGGTCGGATATTAA
ATAAGTCCCAGGCAGATTTACATATTTAATTTAAAACATTGGCTTTATTTCATTTTGTGATGAG
TGATGTATCTGTGTTAGCAAAAAATTGTATAATCATTACCAATACTATTTATTATGCTTAAATA
TATCTAGGCTTTGACCTTATTCCAACACATTCTAAGAAGCCTTGACAAAATAAGTATATTTTAG
AGCTGAATCAGTAAGATTCTAGAGAGAGCAAAACATAGTAGTTCACAATTTTGCAACATAGAAA
GTCACATTTTGAAAGGCTATTTTGAAATTGATTTAATAGCTATTATAGTTTATGAATATCAAAA
TTTGTATAATTTGCATCTTTACTAATGTATGCTAGAGCTAGAAGAGACCTTAAGGATAATATAT
GAAATTAGCTTTCCTTATTTTATAGATAAGGAAAAAGAAATTGTGAAAGGTGAATTTACCTAAT
TAGTGAAAGTTACATAACTAATTACAACAGTCTGTACTGTATAATGCAGAGGACGATTCTCCCT
GTAAAAGGAACTAGAAGCTATTACTAAAAATATATATAGACAAAATTAAAAGAAGGAATGATAA
GAATAAATTTAATTTACCAAATATTGTTAATTAAAATTTTAGATACTTAACATTTATTTAACTT
AAATAAAAGATAACTGTCAGATAAAACTTTATTTTACTAATGAGCAGTGATTTTCTTAGGAATT
GATGAAGGCTTATTGGTATCAAGAATTTAAACCAAATTAAAACTGACACAGGACATTTAGATAC
ATAATAAAATTCGAGCTACATAAGTATATGGAAAATAATGTACCTTGATTATTATGAAATAGAG
CATCTTGAAATTCAGTTTTACTCTAAATGTACTTTTAATACTTGCAGATTCTAAGATTACATTG
TAAAATTCCAGGTTTTCATAATGTTAAAATAGGAAAGTAGAATATAAAGTATCAACAAGTGTAG
TTATACATTTTGTTTTGGATATTTAATCCTTACTTGGGAAAAAATCAGCATCTAAGTAAATTAT
TATTTTAATAAGAACTCTTAAATTGCCAACCTCTGAGAGGTGAAAAGCTATGTAAATAGAAGGA
ATGGCCAATTCAAAAGAATAATAGATGTGATAGTGCCGTGAATGTATTCTACTGGAAATGAATG
TAATAATACATTAAATTTTTAAAATCTA

hide sequence

RefSeq Acc Id:

XM_008953678 ⟹ XP_008951926

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	98,832,811 - 98,846,779 (-)	NCBI
NHGRI_mPanPan1	5	96,986,459 - 97,000,833 (-)	NCBI
Mhudiblu_PPA_v0	5	98,903,740 - 98,917,753 (-)	NCBI
PanPan1.1	5	104,603,701 - 104,617,925 (-)	NCBI

Sequence:

show sequence

TGTATTGGAGAGAGGGCTAGGAGATGGGTGGGAGACGCTGGAAAATTTAAAATCGTTTCCTCAG
GCCTACAGTTTTCCGATCGCCTGCACCACGTTCTATCTACACATCACAGTCTCAGGAGAAGGAT
TTTCAGCCCTTCATTCAGCGCCAATCCTTTAGACCGCGATCTCTCCCGCGCCGGCTCCCAAACA
CTTCCACCCGCAATCTCCACCCCTTCTCACTTGCGCACAACCTGTGGGCTTCAAACTACATCTC
CCATAAAACCGCGGGAAGGCCCCCCTCCCGCCCCCGGATCTCCACCGGAAGTCGGGAAGGCTGC
ATCCGGCTCCAGGAAAAGCGAGTGGGATATCCCAATCTTTGGACTGCATCGTGGTTGCCTCTAG
TGTGGTCACCTTTGGAAATGTCTTCTGTAAAAAGAAGTCCGAAGCAAGAAATAGTTACTCAGTT
TCACTGTTCAGCTGCTGAAGGAGATATTGCCAAGTTAACAGGAATACTCAGTCATTCTCCATCT
CTTCTCAATGAAACTTCTGAAAATGGCTGGACTGCTTTAATGTATGCGGCAAGGAATGGGCACC
CAGAGATTGTCCAATTTCTGCTTGAGAAAGGGTGTGACAGATCAATTGTCAATAAATCAAGGCA
GACTGCACTGGATATTGCTGTATTTTGGGGTTATAAGCATATAGCTAATTTACTAGCTACTGCT
AAAGGTGGGAAGAAGCCTTGGTTCCTAACGAATGAAGTGGAAGAATGTGAAAATTATTTTAGCA
AAACACTACTGGACCGGAAAAGTGAAAAGAGAAATAATTCTGACTGGCTGCTAGCTAAAGAAAG
CCATCCAGCCACAGTTTTTATTCTTTTCTCAGATTTAAATCCCTTGGTTACTCTAGGTGGCAAT
AAAGAAAGTTTCCAACAGCCAGAAGTTAGGCTTTGTCAGCTGAACTACACAGATATAAAGGATT
ATTTGGCCCAGCCTGAGAAGATCACCTTGATTTTTCTTGGAGTAGAACTTGAAATAAAAGACAA
GCTACTTAATTATGCTGGTGAAGTCCCGAGAGAGGAGGAAGATGGATTGGTTGCCTGGTTTGCT
CTAGGTATAGATCCTATTGCTGCTGAAGAATTCAAGCAAAGACATGAAAATTGTTACTTTCTTC
ATCCTCCTATGCCAGCCCTTCTGCAATTGAAAGAAAAAGAAGCTGGGGTTGTAGCTCAAGCAAG
ATCTGTTCTTGCCTGGCACAGTCGACACAAGTTTTGCCCAACCTGTGGAAATGCAACTAAAATT
GAAGAAGGTGGCTATAAGAGACTATGTTTAAAAGAAGACTGTCCTAGTCTCAATGGCGTCCATA
ATACCTCATACCCAAGAGTTGATCCAGTAGTGATCATGCAAGTTATTCATCCAGATGGGACCAA
ATGCCTTTTAGGCAGGCAGAAAAGATTTCCCCCAGGCATGTTTACTTGCCTTGCTGGATTTATT
GAGCCTGGAGAGACAATAGAAGATGCTGTTAGGAGAGAAGTAGAAGAGGAAAGTGGAGTCAAAG
TTGGCCATGTTCAGTATGTCGCTTGTCAACCATGGCCAATGCCTTCCTCCTTAATGATTGGTTG
CTTAGCTCTGGCAGTGTCTACAGAAATTAAAGTTGACAAGAATGAAATAGAGGATGCCCGCTGG
TTCACTAGAGAACAGGTCCTGGATGTTCTGACCAAAGGGAAGCAGCAGGCATTCTTTGTGCCAC
CAAGCCGAGCTATTGCACATCAATTAATCAAACACTGGATTAGAATAAATCCTAATCTCTAAAT
CTAAGAACTAAGCTTTGAGTATTATTTAATAATTTCTAATAACACTCATTCCTCAAGTGATATT
AGAGATTATTCAGTATTCTTGAGAGTGTCACAACACAAAATACGATGTTGGGTTTTCAAAATAT
TTTCAAAATGTTCTTCTGTCTTAATCACAAATTCATATTTTTACACATTTTTACAATATTGCCT
CAGATTAGGTTAAATTTGGGTCAGTCTTCTCTGAACTTTTTCTCTCTTGGTTTCTTTTCTTCCG
TCACAGTTTTATCTCACAAAACCATTTTTCTAATAAGAGAAAATCATGTTGGAAAGATGTTCTA
GAAATGTGCATAAATTTCAGTGCCTCTTGTAAGCATTAAACTGATGACGAAGAAAGTTCCTGAT
TTGAGAAATGAAACAAAGTAATTTTAATGAATTTTTAACTTGTATTAGCTTGAGTTAGCTGGCA
TTAATTTTTTAGTCCTTTTGTTACCTTTAAGTTGTCAATATATGGTTTTTGTTCATCTCCCCAT
TGCAGTCCCACTTGCTCTTTCCTGGGAGTTCCATTGTTCTGGCAGTGGAGGTGTTATAGTGTCG
CCACTCGTCCAATTTGACCAGTGTTAAGAATTTTCTAATTTAATAATTTAATAGTGATCTCAAT
ACCACACCCTCATGGAAGGAGAAAAGCATACTATTATATCTGGGACCTCTCTTTTAGACCTAAA
ATTAATTAACATATCTACTTATATGTTACTTATACCTAAAGCTGTTATTAAGACAAACCAAGAT
TCTCTGCTTTTGCACTGAAATTAAACTTGAAAGGAATTGTCCTCAAAGGTCGGATATTAAATAA
GTCCCAGGCAGATTTACATATTTAATTTAAAACATTGGCTTTATTTCATTTTGTGATGAGTGAT
GTATCTGTGTTAGCAAAAAATTGTATAATCATTACCAATACTATTTATTATGCTTAAATATATC
TAGGCTTTGACCTTATTCCAACACATTCTAAGAAGCCTTGACAAAATAAGTATATTTTAGAGCT
GAATCAGTAAGATTCTAGAGAGAGCAAAACATAGTAGTTCACAATTTTGCAACATAGAAAGTCA
CATTTTGAAAGGCTATTTTGAAATTGATTTAATAGCTATTATAGTTTATGAATATCAAAATTTG
TATAATTTGCATCTTTACTAATGTATGCTAGAGCTAGAAGAGACCTTAAGGATAATATATGAAA
TTAGCTTTCCTTATTTTATAGATAAGGAAAAAGAAATTGTGAAAGGTGAATTTACCTAATTAGT
GAAAGTTACATAACTAATTACAACAGTCTGTACTGTATAATGCAGAGGACGATTCTCCCTGTAA
AAGGAACTAGAAGCTATTACTAAAAATATATATAGACAAAATTAAAAGAAGGAATGATAAGAAT
AAATTTAATTTACCAAATATTGTTAATTAAAATTTTAGATACTTAACATTTATTTAACTTAAAT
AAAAGATAACTGTCAGATAAAACTTTATTTTACTAATGAGCAGTGATTTTCTTAGGAATTGATG
AAGGCTTATTGGTATCAAGAATTTAAACCAAATTAAAACTGACACAGGACATTTAGATACATAA
TAAAATTCGAGCTACATAAGTATATGGAAAATAATGTACCTTGATTATTATGAAATAGAGCATC
TTGAAATTCAGTTTTACTCTAAATGTACTTTTAATACTTGCAGATTCTAAGATTACATTGTAAA
ATTCCAGGTTTTCATAATGTTAAAATAGGAAAGTAGAATATAAAGTATCAACAAGTGTAGTTAT
ACATTTTGTTTTGGATATTTAATCCTTACTTGGGAAAAAATCAGCATCTAAGTAAATTATTATT
TTAATAAGAACTCTTAAATTGCCAACCTCTGAGAGGTGAAAAGCTATGTAAATAGAAGGAATGG
CCAATTCAAAAGAATAATAGATGTGATAGTGCCGTGAATGTATTCTACTGGAAATGAATGTAAT
AATACATTAAATTTTTAAAATCTA

hide sequence

RefSeq Acc Id:

XM_055112515 ⟹ XP_054968490

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	98,832,811 - 98,846,498 (-)	NCBI
NHGRI_mPanPan1	5	96,986,459 - 97,000,228 (-)	NCBI

RefSeq Acc Id:

XM_055112516 ⟹ XP_054968491

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	98,832,811 - 98,846,494 (-)	NCBI
NHGRI_mPanPan1	5	96,986,459 - 97,000,233 (-)	NCBI

RefSeq Acc Id:

XM_057302319 ⟹ XP_057158302

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	98,832,811 - 98,846,787 (-)	NCBI
NHGRI_mPanPan1	5	96,986,459 - 97,000,835 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003828356	(Get FASTA)	NCBI Sequence Viewer
	XP_008951926	(Get FASTA)	NCBI Sequence Viewer
	XP_054968490	(Get FASTA)	NCBI Sequence Viewer
	XP_054968491	(Get FASTA)	NCBI Sequence Viewer
	XP_057158302	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000027380.1
	ENSPPAP00000027381.1

RefSeq Acc Id:	XP_008951926 ⟸ XM_008953678
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9BGH8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSVKRSPKQEIVTQFHCSAAEGDIAKLTGILSHSPSLLNETSENGWTALMYAARNGHPEIVQF LLEKGCDRSIVNKSRQTALDIAVFWGYKHIANLLATAKGGKKPWFLTNEVEECENYFSKTLLDR KSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQPEVRLCQLNYTDIKDYLAQPE KITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFALGIDPIAAEEFKQRHENCYFLHPPMPA LLQLKEKEAGVVAQARSVLAWHSRHKFCPTCGNATKIEEGGYKRLCLKEDCPSLNGVHNTSYPR VDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPGETIEDAVRREVEEESGVKVGHVQY VACQPWPMPSSLMIGCLALAVSTEIKVDKNEIEDARWFTREQVLDVLTKGKQQAFFVPPSRAIA HQLIKHWIRINPNL hide sequence

RefSeq Acc Id:	XP_003828356 ⟸ XM_003828308
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9BGH8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSVKRSPKQEIVTQFHCSAAEGDIAKLTGILSHSPSLLNETSENGWTALMYAARNGHPEIVQF LLEKGCDRSIVNKSRQTALDIAVFWGYKHIANLLATAKGGKKPWFLTNEVEECENYFSKTLLDR KSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQPEVRLCQLNYTDIKDYLAQPE KITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFALGIDPIAAEEFKQRHENCYFLHPPMPA LLQLKEKEAGVVAQARSVLAWHSRHKFCPTCGNATKIEEGGYKRLCLKEDCPSLNGVHNTSYPR VDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPGETIEDAVRREVEEESGVKVGHVQY VACQPWPMPSSLMIGCLALAVSTEIKVDKNEIEDARWFTREQVLDVLTKGKQQAFFVPPSRAIA HQLIKHWIRINPNL hide sequence

Ensembl Acc Id:

ENSPPAP00000027380 ⟸ ENSPPAT00000050220

Ensembl Acc Id:

ENSPPAP00000027381 ⟸ ENSPPAT00000050221

RefSeq Acc Id:	XP_054968491 ⟸ XM_055112516
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_054968490 ⟸ XM_055112515
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_057158302 ⟸ XM_057302319
- Peptide Label:	isoform X4

Protein Domains

Nudix hydrolase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000036756	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000050220.1	UniProtKB/TrEMBL
	ENSPPAT00000050221.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.20	UniProtKB/TrEMBL
	3.90.79.20	UniProtKB/TrEMBL
	Nucleoside Triphosphate Pyrophosphohydrolase	UniProtKB/TrEMBL
InterPro	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
	NAD-cap_RNA_hydrolase_NudC	UniProtKB/TrEMBL
	NADH_PPase-like_N	UniProtKB/TrEMBL
	NudC-like_C	UniProtKB/TrEMBL
	NUDIX_hydrolase-like_dom_sf	UniProtKB/TrEMBL
	NUDIX_hydrolase_CS	UniProtKB/TrEMBL
	NUDIX_hydrolase_dom	UniProtKB/TrEMBL
	Znr_NADH_PPase	UniProtKB/TrEMBL
KEGG Report	pps:100968774	UniProtKB/TrEMBL
NCBI Gene	NUDT12	ENTREZGENE
PANTHER	NAD-CAPPED RNA HYDROLASE NUDT12	UniProtKB/TrEMBL
	NUDIX HYDROLASE, NUDC SUBFAMILY	UniProtKB/TrEMBL
Pfam	Ank_2	UniProtKB/TrEMBL
	NUDIX	UniProtKB/TrEMBL
	NUDIX-like	UniProtKB/TrEMBL
	zf-NADH-PPase	UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
	NUDIX	UniProtKB/TrEMBL
	NUDIX_BOX	UniProtKB/TrEMBL
SMART	ANK	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48403	UniProtKB/TrEMBL
	SSF55811	UniProtKB/TrEMBL
UniProt	A0A2R9BGH8	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Annotations - SMPDB

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Imported Disease Annotations - ClinVar

Imported Annotations - SMPDB