NRAP (nebulin related anchoring protein) - Rat Genome Database

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Gene: NRAP (nebulin related anchoring protein) Pan paniscus
Analyze
Symbol: NRAP
Name: nebulin related anchoring protein
RGD ID: 12012252
Description: ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); metal ion binding (inferred); INVOLVED IN cardiac muscle thin filament assembly (inferred); ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (inferred); fascia adherens (inferred); muscle tendon junction (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28125,466,763 - 125,541,517 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110125,472,099 - 125,546,853 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v010110,182,003 - 110,257,033 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110113,616,060 - 113,691,114 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10113,616,188 - 113,690,926 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
NRAP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28125,466,763 - 125,541,517 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110125,472,099 - 125,546,853 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v010110,182,003 - 110,257,033 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110113,616,060 - 113,691,114 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10113,616,188 - 113,690,926 (-)Ensemblpanpan1.1panPan2
NRAP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810113,588,714 - 113,664,041 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10113,588,714 - 113,664,070 (-)EnsemblGRCh38hg38GRCh38
GRCh3710115,348,473 - 115,423,800 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610115,338,573 - 115,413,795 (-)NCBINCBI36Build 36hg18NCBI36
Build 3410115,338,573 - 115,413,795NCBI
Celera10109,076,182 - 109,151,224 (-)NCBICelera
Cytogenetic Map10q25.3NCBI
HuRef10108,975,705 - 109,050,768 (-)NCBIHuRef
CHM1_110115,630,550 - 115,705,862 (-)NCBICHM1_1
T2T-CHM13v2.010114,480,337 - 114,555,930 (-)NCBIT2T-CHM13v2.0
Nrap
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391956,308,473 - 56,378,466 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1956,308,467 - 56,378,469 (-)EnsemblGRCm39 Ensembl
GRCm381956,320,037 - 56,390,062 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1956,320,035 - 56,390,037 (-)EnsemblGRCm38mm10GRCm38
MGSCv371956,394,531 - 56,464,525 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361956,373,351 - 56,443,285 (-)NCBIMGSCv36mm8
Celera1958,507,428 - 58,577,358 (-)NCBICelera
Cytogenetic Map19D2NCBI
cM Map1951.8NCBI
Nrap
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81265,355,324 - 265,433,229 (-)NCBIGRCr8
mRatBN7.21255,350,113 - 255,427,704 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1255,350,113 - 255,427,693 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1263,556,625 - 263,637,474 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01270,262,666 - 270,343,513 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01262,910,694 - 262,989,554 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01277,104,519 - 277,181,397 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1277,104,514 - 277,181,414 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01284,485,970 - 284,562,998 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41262,591,454 - 262,672,255 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11262,802,570 - 262,883,294 (-)NCBI
Celera1251,051,595 - 251,127,339 (-)NCBICelera
Cytogenetic Map1q55NCBI
Nrap
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543118,604,659 - 18,669,905 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543118,604,508 - 18,669,853 (-)NCBIChiLan1.0ChiLan1.0
NRAP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12824,522,285 - 24,592,267 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2824,522,362 - 24,592,192 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2824,673,618 - 24,743,579 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02825,054,064 - 25,124,052 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2825,054,070 - 25,124,030 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12824,611,479 - 24,681,399 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02824,619,214 - 24,689,378 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02824,818,690 - 24,888,681 (-)NCBIUU_Cfam_GSD_1.0
Nrap
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721321,485,493 - 21,556,240 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364864,005,055 - 4,075,615 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364864,005,064 - 4,075,660 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NRAP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14123,926,927 - 124,018,440 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114123,928,562 - 124,018,462 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214135,112,165 - 135,130,701 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NRAP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.19106,473,057 - 106,549,679 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604867,687,434 - 67,763,508 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nrap
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473732,896,006 - 32,963,983 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473732,895,903 - 32,963,988 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000045984   ⟹   ENSPPAP00000023163
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl10113,616,188 - 113,690,926 (-)Ensembl
RefSeq Acc Id: XM_003825595   ⟹   XP_003825643
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v28125,466,763 - 125,541,517 (-)NCBI
NHGRI_mPanPan110125,472,099 - 125,546,853 (-)NCBI
Mhudiblu_PPA_v010110,182,003 - 110,256,976 (-)NCBI
PanPan1.110113,616,060 - 113,691,114 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034931518   ⟹   XP_034787409
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v28125,466,767 - 125,541,517 (-)NCBI
NHGRI_mPanPan110125,472,103 - 125,546,833 (-)NCBI
Mhudiblu_PPA_v010110,182,003 - 110,256,976 (-)NCBI
RefSeq Acc Id: XM_034931519   ⟹   XP_034787410
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v28125,466,763 - 125,541,517 (-)NCBI
NHGRI_mPanPan110125,472,099 - 125,546,833 (-)NCBI
Mhudiblu_PPA_v010110,182,113 - 110,257,033 (-)NCBI
Protein Sequences
Protein RefSeqs XP_003825643 (Get FASTA)   NCBI Sequence Viewer  
  XP_034787409 (Get FASTA)   NCBI Sequence Viewer  
  XP_034787410 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000023163.1
Reference Protein Sequences
RefSeq Acc Id: XP_003825643   ⟸   XM_003825595
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_034787409   ⟸   XM_034931518
- Peptide Label: isoform X1
- UniProtKB: A0A2R9B4R6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034787410   ⟸   XM_034931519
- Peptide Label: isoform X2
RefSeq Acc Id: ENSPPAP00000023163   ⟸   ENSPPAT00000045984
Protein Domains
LIM zinc-binding


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000034745 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000045984.1 UniProtKB/TrEMBL
Gene3D-CATH Cysteine Rich Protein UniProtKB/TrEMBL
InterPro Nebulin-like UniProtKB/TrEMBL
  Nebulin_repeat UniProtKB/TrEMBL
  Znf_LIM UniProtKB/TrEMBL
NCBI Gene NRAP ENTREZGENE
PANTHER NEBULIN UniProtKB/TrEMBL
  NEBULIN-RELATED-ANCHORING PROTEIN UniProtKB/TrEMBL
Pfam LIM UniProtKB/TrEMBL
  Nebulin UniProtKB/TrEMBL
PRINTS NEBULIN UniProtKB/TrEMBL
PROSITE LIM_DOMAIN_1 UniProtKB/TrEMBL
  LIM_DOMAIN_2 UniProtKB/TrEMBL
  NEBULIN UniProtKB/TrEMBL
SMART LIM UniProtKB/TrEMBL
  NEBU UniProtKB/TrEMBL
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/TrEMBL
UniProt A0A2R9B4R6 ENTREZGENE, UniProtKB/TrEMBL