TACSTD2 (tumor associated calcium signal transducer 2) - Rat Genome Database
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Gene: TACSTD2 (tumor associated calcium signal transducer 2) Pan paniscus
Analyze
Symbol: TACSTD2
Name: tumor associated calcium signal transducer 2
RGD ID: 12010763
Description: INVOLVED IN negative regulation of branching involved in ureteric bud morphogenesis (ortholog); negative regulation of cell motility (ortholog); negative regulation of epithelial cell migration (ortholog); ASSOCIATED WITH corneal dystrophy (ortholog); endometriosis (ortholog); gelatinous drop-like corneal dystrophy (ortholog); FOUND IN basal plasma membrane (ortholog); extracellular space (ortholog); lateral plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: tumor-associated calcium signal transducer 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1159,544,868 - 59,547,207 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl159,545,625 - 59,546,596 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0157,838,661 - 57,841,444 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
TACSTD2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1159,544,868 - 59,547,207 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl159,545,625 - 59,546,596 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0157,838,661 - 57,841,444 (-)NCBIMhudiblu_PPA_v0panPan3
TACSTD2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl158,575,433 - 58,577,252 (-)EnsemblGRCh38hg38GRCh38
GRCh38158,575,433 - 58,577,252 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37159,041,105 - 59,042,924 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36158,813,231 - 58,816,033 (-)NCBINCBI36hg18NCBI36
Build 34158,752,663 - 58,755,466NCBI
Celera157,324,947 - 57,327,018 (-)NCBI
Cytogenetic Map1p32.1NCBI
HuRef157,151,670 - 57,153,741 (-)NCBIHuRef
CHM1_1159,156,449 - 59,158,520 (-)NCBICHM1_1
Tacstd2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39667,511,043 - 67,512,806 (-)NCBIGRCm39mm39
GRCm39 Ensembl667,511,046 - 67,512,780 (-)Ensembl
GRCm38667,534,059 - 67,535,822 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl667,534,062 - 67,535,796 (-)EnsemblGRCm38mm10GRCm38
MGSCv37667,484,053 - 67,485,816 (-)NCBIGRCm37mm9NCBIm37
MGSCv36667,463,640 - 67,465,374 (-)NCBImm8
Celera669,652,700 - 69,654,464 (-)NCBICelera
Cytogenetic Map6C1NCBI
Tacstd2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2496,707,950 - 96,709,650 (-)NCBI
Rnor_6.0 Ensembl498,341,188 - 98,342,887 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0498,341,187 - 98,342,887 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04163,126,801 - 163,128,501 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4497,803,151 - 97,804,851 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1498,047,632 - 98,049,313 (-)NCBI
Celera491,374,254 - 91,375,954 (-)NCBICelera
Cytogenetic Map4q31NCBI
Tacstd2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554641,282,989 - 1,284,785 (+)NCBIChiLan1.0ChiLan1.0
TACSTD2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1551,122,469 - 51,123,753 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Tacstd2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365223,206,826 - 3,208,675 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TACSTD2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6153,859,482 - 153,861,492 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16153,859,488 - 153,861,508 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26141,453,653 - 141,455,459 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TACSTD2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12074,403,547 - 74,406,756 (+)NCBI
Tacstd2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248621,721,030 - 1,722,780 (+)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003824220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000012481   ⟹   ENSPPAP00000002625
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl159,545,625 - 59,546,596 (-)Ensembl
RefSeq Acc Id: XM_003824220   ⟹   XP_003824268
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1159,544,868 - 59,547,207 (-)NCBI
Mhudiblu_PPA_v0157,838,661 - 57,841,444 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003824268 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003824268   ⟸   XM_003824220
- Sequence:
RefSeq Acc Id: ENSPPAP00000002625   ⟸   ENSPPAT00000012481
Protein Domains
Thyroglobulin type-1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000011467 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000002625 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000012481 UniProtKB/TrEMBL
Gene3D-CATH 4.10.800.10 UniProtKB/TrEMBL
InterPro EPCAM/Trop-2 UniProtKB/TrEMBL
  Thyroglobulin_1 UniProtKB/TrEMBL
  Thyroglobulin_1_sf UniProtKB/TrEMBL
KEGG Report pps:100980222 UniProtKB/TrEMBL
NCBI Gene TACSTD2 ENTREZGENE
PANTHER PTHR14168 UniProtKB/TrEMBL
Pfam Thyroglobulin_1 UniProtKB/TrEMBL
PROSITE THYROGLOBULIN_1_1 UniProtKB/TrEMBL
  THYROGLOBULIN_1_2 UniProtKB/TrEMBL
SMART SM00211 UniProtKB/TrEMBL
Superfamily-SCOP SSF57610 UniProtKB/TrEMBL
UniProt A0A2R8ZC40_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-03-08 TACSTD2  tumor associated calcium signal transducer 2    tumor-associated calcium signal transducer 2  Symbol and/or name change 5135510 APPROVED