POGLUT3 (protein O-glucosyltransferase 3) - Rat Genome Database

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Gene: POGLUT3 (protein O-glucosyltransferase 3) Pan paniscus
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Symbol: POGLUT3
Name: protein O-glucosyltransferase 3
RGD ID: 12010337
Description: ENCODES a protein that exhibits glucosyltransferase activity (inferred); UDP-glucosyltransferase activity (inferred); UDP-xylosyltransferase activity (inferred); INVOLVED IN protein glycosylation (inferred); protein O-linked glycosylation via serine (inferred); ASSOCIATED WITH ataxia telangiectasia (ortholog); beta-ketothiolase deficiency (ortholog); chromosome 11 partial duplication syndrome (ortholog); FOUND IN endomembrane system (inferred); endoplasmic reticulum (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: KDEL motif containing 2; KDEL motif-containing protein 2; KDELC2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29109,215,239 - 109,242,398 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111110,307,987 - 110,335,306 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011103,356,813 - 103,383,515 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111106,827,036 - 106,853,161 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11106,827,056 - 106,853,166 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
POGLUT3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29109,215,239 - 109,242,398 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111110,307,987 - 110,335,306 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011103,356,813 - 103,383,515 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111106,827,036 - 106,853,161 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11106,827,056 - 106,853,166 (-)Ensemblpanpan1.1panPan2
POGLUT3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811108,472,116 - 108,498,384 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11108,472,112 - 108,498,405 (-)EnsemblGRCh38hg38GRCh38
GRCh3711108,342,843 - 108,369,111 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611107,848,043 - 107,874,369 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411107,848,057 - 107,874,321NCBI
Celera11105,497,757 - 105,524,083 (-)NCBICelera
Cytogenetic Map11q22.3NCBI
HuRef11104,268,315 - 104,294,641 (-)NCBIHuRef
CHM1_111108,225,886 - 108,252,215 (-)NCBICHM1_1
T2T-CHM13v2.011108,479,598 - 108,506,085 (-)NCBIT2T-CHM13v2.0
Poglut3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39953,294,217 - 53,313,167 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl953,295,325 - 53,313,167 (+)EnsemblGRCm39 Ensembl
GRCm38953,383,004 - 53,401,867 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl953,384,025 - 53,401,867 (+)EnsemblGRCm38mm10GRCm38
MGSCv37953,192,128 - 53,209,972 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36953,146,418 - 53,164,262 (+)NCBIMGSCv36mm8
Celera950,643,757 - 50,661,602 (+)NCBICelera
Cytogenetic Map9A5.3NCBI
cM Map929.12NCBI
Poglut3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8862,673,811 - 62,691,606 (+)NCBIGRCr8
mRatBN7.2853,777,614 - 53,795,404 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl853,777,785 - 53,795,399 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx859,303,489 - 59,321,269 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0857,582,513 - 57,600,293 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0855,446,743 - 55,464,525 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0857,964,988 - 57,982,605 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl857,964,988 - 57,982,600 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0856,547,250 - 56,564,867 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4856,841,444 - 56,859,061 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera853,268,512 - 53,286,116 (+)NCBICelera
Cytogenetic Map8q24NCBI
Poglut3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541210,579,511 - 10,598,153 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541210,582,169 - 10,598,153 (-)NCBIChiLan1.0ChiLan1.0
POGLUT3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1524,082,818 - 24,104,620 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl524,082,812 - 24,103,829 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha524,009,443 - 24,031,489 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0524,112,205 - 24,134,220 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl524,112,205 - 24,134,220 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1524,160,368 - 24,182,377 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0524,061,781 - 24,083,780 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0524,119,709 - 24,141,770 (+)NCBIUU_Cfam_GSD_1.0
Poglut3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494791,238,626 - 91,262,246 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936551274,303 - 297,871 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936551273,275 - 297,877 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
POGLUT3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1199,886,614 - 99,912,541 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl199,887,908 - 99,912,155 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604326,050,511 - 26,077,635 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Poglut3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247843,170,209 - 3,183,371 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247843,169,638 - 3,183,684 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000035894   ⟹   ENSPPAP00000013224
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl11106,827,056 - 106,853,166 (-)Ensembl
RefSeq Acc Id: XM_003828339   ⟹   XP_003828387
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v29109,215,239 - 109,242,398 (-)NCBI
NHGRI_mPanPan111110,307,987 - 110,335,306 (-)NCBI
Mhudiblu_PPA_v011103,356,813 - 103,383,515 (-)NCBI
PanPan1.111106,827,047 - 106,853,161 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034933630   ⟹   XP_034789521
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v29109,215,239 - 109,241,684 (-)NCBI
NHGRI_mPanPan111110,307,987 - 110,334,197 (-)NCBI
Mhudiblu_PPA_v011103,356,988 - 103,383,008 (-)NCBI
Protein Sequences
Protein RefSeqs XP_003828387 (Get FASTA)   NCBI Sequence Viewer  
  XP_034789521 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000013224.1
RefSeq Acc Id: XP_003828387   ⟸   XM_003828339
- Peptide Label: isoform X1
- UniProtKB: A0A2R9A7I3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034789521   ⟸   XM_034933630
- Peptide Label: isoform X2
Ensembl Acc Id: ENSPPAP00000013224   ⟸   ENSPPAT00000035894
Protein Domains
Glycosyl transferase CAP10


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000029797 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000035894.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro CAP10 UniProtKB/TrEMBL
  Filamin/ABP280_repeat-like UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_E-set UniProtKB/TrEMBL
  O-Glucosyltr/Glycosyltrsf_90 UniProtKB/TrEMBL
NCBI Gene KDELC2 ENTREZGENE
PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED UniProtKB/TrEMBL
  PROTEIN O-GLUCOSYLTRANSFERASE 3 UniProtKB/TrEMBL
Pfam Filamin UniProtKB/TrEMBL
  Glyco_transf_90 UniProtKB/TrEMBL
SMART CAP10 UniProtKB/TrEMBL
Superfamily-SCOP SSF81296 UniProtKB/TrEMBL
UniProt A0A2R9A7I3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-02-19 POGLUT3  protein O-glucosyltransferase 3  KDELC2  KDEL motif containing 2  Symbol and/or name change 5135510 APPROVED