RPN1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 126,544,128 - 126,575,301 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 126,548,850 - 126,580,024 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 125,666,844 - 125,697,922 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 133,032,098 - 133,056,733 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 133,032,560 - 133,058,666 (-) | Ensembl | panpan1.1 | | panPan2 | |
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RPN1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 128,619,969 - 128,650,818 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 128,619,969 - 128,681,075 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 128,338,812 - 128,369,661 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 129,821,503 - 129,852,409 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 129,821,510 - 129,852,378 | NCBI | | | | | Celera | 3 | 126,767,445 - 126,799,199 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q21.3 | NCBI | | | | | HuRef | 3 | 125,722,987 - 125,753,880 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 128,301,823 - 128,332,696 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 131,361,936 - 131,392,788 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Rpn1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 6 | 88,061,455 - 88,082,286 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 88,061,464 - 88,082,286 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 88,084,473 - 88,105,304 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 88,084,482 - 88,105,304 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 88,034,467 - 88,055,298 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 88,050,157 - 88,070,945 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 90,021,709 - 90,042,660 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | D1 | NCBI | | | | | cM Map | 6 | 39.13 | NCBI | | | | |
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Rpn1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 4 | 122,100,976 - 122,122,382 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 120,543,667 - 120,565,069 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 120,543,667 - 120,565,069 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 126,015,899 - 126,037,361 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 121,790,679 - 121,812,141 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 120,414,917 - 120,436,381 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 119,997,232 - 120,018,687 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 119,997,268 - 120,018,679 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 185,243,182 - 185,264,593 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Celera | 4 | 109,501,306 - 109,522,708 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q34 | NCBI | | | | |
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Rpn1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955429 | 15,204,453 - 15,232,476 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955429 | 15,204,848 - 15,231,547 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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RPN1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 20 | 2,611,316 - 2,640,047 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 2,611,551 - 2,639,983 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 2,647,475 - 2,676,092 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 2,631,950 - 2,660,570 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 2,631,734 - 2,660,531 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 2,352,624 - 2,381,238 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 2,679,052 - 2,707,535 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 2,639,667 - 2,668,086 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Rpn1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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RPN1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 13 | 71,892,002 - 71,908,932 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 71,892,600 - 71,908,772 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 79,273,302 - 79,289,569 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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RPN1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 22 | 52,391,793 - 52,417,341 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 22 | 52,391,813 - 52,417,575 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 113,942,601 - 113,968,226 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Rpn1 (Heterocephalus glaber - naked mole-rat) |
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