RHOU (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 20,467,080 - 20,478,267 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 20,655,087 - 20,666,274 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 204,282,231 - 204,293,758 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 209,313,000 - 209,324,548 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
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RHOU (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 228,644,647 - 228,746,669 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 228,735,479 - 228,746,664 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 228,780,394 - 228,882,416 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 226,937,492 - 226,949,034 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 225,177,603 - 225,189,144 | NCBI | | | | | Celera | 1 | 202,138,056 - 202,149,598 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q42.13 | NCBI | | | | | HuRef | 1 | 199,269,357 - 199,373,219 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 230,032,574 - 230,154,436 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 228,000,475 - 228,124,580 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Rhou (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 8 | 124,380,609 - 124,390,622 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 124,380,668 - 124,390,623 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 123,653,929 - 123,663,880 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 123,653,929 - 123,663,884 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 126,177,829 - 126,187,780 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 126,540,019 - 126,549,970 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 127,920,991 - 127,930,722 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | E1 | NCBI | | | | | cM Map | 8 | 72.1 | NCBI | | | | |
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Rhou (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 19 | 68,538,960 - 68,548,733 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 19 | 51,641,476 - 51,651,249 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 19 | 51,641,227 - 51,650,552 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 19 | 59,277,560 - 59,287,324 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 19 | 61,359,619 - 61,369,390 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 19 | 56,431,787 - 56,443,896 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 19 | 56,435,577 - 56,441,733 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 19 | 67,150,146 - 67,156,246 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Celera | 19 | 51,006,883 - 51,028,716 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | q12 | NCBI | | | | |
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Rhou (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955492 | 8,949,008 - 8,955,502 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955492 | 8,949,003 - 8,955,502 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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RHOU (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 4 | 10,395,033 - 10,406,239 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 4 | 10,396,111 - 10,406,244 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 4 | 10,386,062 - 10,396,992 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 4 | 10,426,435 - 10,437,358 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 4 | 10,427,513 - 10,437,646 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 4 | 10,429,840 - 10,440,773 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 4 | 10,527,770 - 10,538,689 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 4 | 10,796,737 - 10,807,672 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Rhou (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024409344 | 44,240,825 - 44,248,502 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936484 | 20,406,051 - 20,412,807 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936484 | 20,406,053 - 20,413,428 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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RHOU (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 14 | 60,667,108 - 60,677,731 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 60,667,104 - 60,677,582 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 65,508,325 - 65,516,995 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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RHOU (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 25 | 66,037,183 - 66,048,822 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 25 | 66,037,690 - 66,048,821 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666055 | 67,848,435 - 67,860,070 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Rhou (Heterocephalus glaber - naked mole-rat) |
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