PIP (prolactin induced protein) - Rat Genome Database

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Gene: PIP (prolactin induced protein) Pan paniscus
Analyze
Symbol: PIP
Name: prolactin induced protein
RGD ID: 12004866
Description: ENCODES a protein that exhibits identical protein binding (ortholog); IgG binding (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); negative regulation of T cell apoptotic process (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH sinusitis (ortholog); FOUND IN apical plasma membrane (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: prolactin inducted protein; prolactin-inducible protein homolog
RGD Orthologs
Human
Mouse
Rat
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26179,984,853 - 179,992,474 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1731,995,110 - 32,002,731 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07135,127,479 - 135,135,117 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17147,618,291 - 147,625,936 (+)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
sinusitis  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PIP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26179,984,853 - 179,992,474 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1731,995,110 - 32,002,731 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07135,127,479 - 135,135,117 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17147,618,291 - 147,625,936 (+)NCBIpanpan1.1PanPan1.1panPan2
PIP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387143,132,077 - 143,139,739 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7143,132,077 - 143,139,739 (+)EnsemblGRCh38hg38GRCh38
GRCh377142,829,170 - 142,836,832 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367142,539,296 - 142,546,956 (+)NCBINCBI36Build 36hg18NCBI36
Build 347142,346,010 - 142,353,671NCBI
Celera7137,666,037 - 137,673,689 (+)NCBICelera
Cytogenetic Map7q34NCBI
HuRef7137,167,318 - 137,174,970 (+)NCBIHuRef
CHM1_17142,766,052 - 142,773,688 (+)NCBICHM1_1
T2T-CHM13v2.07144,487,494 - 144,495,160 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27142,231,068 - 142,238,728 (+)NCBI
Pip
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39641,824,483 - 41,828,999 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl641,824,469 - 41,828,999 (+)EnsemblGRCm39 Ensembl
GRCm38641,847,549 - 41,852,065 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl641,847,535 - 41,852,065 (+)EnsemblGRCm38mm10GRCm38
MGSCv37641,797,548 - 41,802,061 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36641,777,161 - 41,781,671 (+)NCBIMGSCv36mm8
Celera641,800,116 - 41,804,629 (+)NCBICelera
Cytogenetic Map6B2.1NCBI
cM Map620.05NCBI
Pip
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8471,754,265 - 71,758,559 (+)NCBIGRCr8
mRatBN7.2470,787,627 - 70,791,921 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl470,787,627 - 70,791,921 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx475,705,167 - 75,709,461 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0471,618,416 - 71,622,710 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0470,044,294 - 70,048,604 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0471,320,859 - 71,325,153 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl471,320,859 - 71,325,153 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04136,110,485 - 136,114,779 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4469,633,474 - 69,637,768 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1469,909,603 - 69,913,898 (+)NCBI
Celera465,738,147 - 65,742,441 (+)NCBICelera
Cytogenetic Map4q24NCBI
PIP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1166,491,424 - 6,498,175 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl166,491,424 - 6,498,133 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha167,479,446 - 7,486,201 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0166,344,252 - 6,351,022 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1166,303,071 - 6,309,839 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0166,143,590 - 6,150,363 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0166,219,083 - 6,225,860 (-)NCBIUU_Cfam_GSD_1.0
Pip
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511812,358,839 - 12,363,416 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936527540,008 - 544,586 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936527540,051 - 544,586 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PIP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1187,110,528 - 7,117,274 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2187,440,016 - 7,446,732 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PIP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121112,015,420 - 112,024,133 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21112,016,135 - 112,024,030 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660728,744,946 - 8,753,431 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Sequence


RefSeq Acc Id: XM_003820552   ⟹   XP_003820600
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26179,984,853 - 179,992,474 (+)NCBI
NHGRI_mPanPan1731,995,110 - 32,002,731 (+)NCBI
Mhudiblu_PPA_v07135,127,479 - 135,135,117 (+)NCBI
PanPan1.17147,618,291 - 147,625,936 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003820600 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAZ82303 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_003820600   ⟸   XM_003820552
- UniProtKB: Q3I1T6 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro Ig-like_fold UniProtKB/TrEMBL
  Ig_E-set UniProtKB/TrEMBL
  PIP UniProtKB/TrEMBL
NCBI Gene PIP ENTREZGENE
PANTHER PROLACTIN-INDUCIBLE PROTEIN UniProtKB/TrEMBL
  PTHR15096 UniProtKB/TrEMBL
Pfam SVA UniProtKB/TrEMBL
Superfamily-SCOP SSF81296 UniProtKB/TrEMBL
UniProt Q3I1T6 ENTREZGENE, UniProtKB/TrEMBL