SLC43A2 (solute carrier family 43 member 2) - Rat Genome Database
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Gene: SLC43A2 (solute carrier family 43 member 2) Pan paniscus
Analyze
Symbol: SLC43A2
Name: solute carrier family 43 member 2
RGD ID: 11998405
Description: ENCODES a protein that exhibits L-amino acid transmembrane transporter activity (ortholog); INVOLVED IN L-amino acid transport (ortholog); negative regulation of amino acid transport (ortholog); negative regulation of leucine import (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: large neutral amino acids transporter small subunit 4
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1171,455,767 - 1,508,437 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl171,455,767 - 1,508,443 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0171,557,305 - 1,612,968 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
SLC43A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1171,455,767 - 1,508,437 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl171,455,767 - 1,508,443 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0171,557,305 - 1,612,968 (-)NCBIMhudiblu_PPA_v0panPan3
SLC43A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl171,569,267 - 1,628,886 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl171,569,268 - 1,628,886 (-)EnsemblGRCh38hg38GRCh38
GRCh38171,569,254 - 1,630,014 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37171,477,678 - 1,532,130 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36171,424,446 - 1,478,880 (-)NCBINCBI36hg18NCBI36
Build 34171,424,445 - 1,478,880NCBI
Celera171,493,130 - 1,547,478 (-)NCBI
Cytogenetic Map17p13.3NCBI
HuRef171,377,342 - 1,431,478 (-)NCBIHuRef
CHM1_1171,481,308 - 1,540,959 (-)NCBICHM1_1
Slc43a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391175,420,741 - 75,468,401 (+)NCBIGRCm39mm39
GRCm381175,529,915 - 75,577,575 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1175,531,694 - 75,577,575 (+)EnsemblGRCm38mm10GRCm38
MGSCv371175,345,210 - 75,388,543 (+)NCBIGRCm37mm9NCBIm37
MGSCv361175,347,903 - 75,391,236 (+)NCBImm8
Celera1183,040,687 - 83,084,024 (+)NCBICelera
Cytogenetic Map11B5NCBI
Slc43a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01063,676,317 - 63,719,283 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1063,677,396 - 63,719,283 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01064,285,713 - 64,328,683 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41062,853,094 - 62,894,776 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11062,867,612 - 62,905,728 (+)NCBI
Celera1059,404,785 - 59,446,467 (+)NCBICelera
Cytogenetic Map10q24NCBI
Slc43a2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554811,550,289 - 1,595,942 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554811,550,289 - 1,597,213 (+)NCBIChiLan1.0ChiLan1.0
SLC43A2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl945,736,508 - 45,776,270 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1945,731,379 - 45,777,277 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Slc43a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365387,712,564 - 7,758,069 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC43A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1247,791,911 - 47,838,946 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11247,791,911 - 47,839,127 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21249,676,753 - 49,724,924 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SLC43A2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1161,247,383 - 1,300,012 (-)NCBI
ChlSab1.1 Ensembl161,244,913 - 1,299,519 (-)Ensembl
Slc43a2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247864,284,559 - 4,334,086 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000031951   ⟹   ENSPPAP00000009310
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl171,455,767 - 1,508,443 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000031955   ⟹   ENSPPAP00000009314
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl171,456,966 - 1,508,443 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000031956   ⟹   ENSPPAP00000009315
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl171,456,966 - 1,508,437 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000031957   ⟹   ENSPPAP00000009316
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl171,456,966 - 1,485,331 (-)Ensembl
RefSeq Acc Id: XM_034941226   ⟹   XP_034797117
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0171,558,527 - 1,612,968 (-)NCBI
RefSeq Acc Id: XM_034941227   ⟹   XP_034797118
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0171,558,527 - 1,612,446 (-)NCBI
RefSeq Acc Id: XM_034941228   ⟹   XP_034797119
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0171,557,305 - 1,612,387 (-)NCBI
RefSeq Acc Id: XM_034941229   ⟹   XP_034797120
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0171,557,328 - 1,612,878 (-)NCBI
RefSeq Acc Id: XM_034941230   ⟹   XP_034797121
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0171,557,328 - 1,610,453 (-)NCBI
Reference Sequences
RefSeq Acc Id: XP_034797119   ⟸   XM_034941228
- Peptide Label: isoform X1
RefSeq Acc Id: XP_034797120   ⟸   XM_034941229
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034797121   ⟸   XM_034941230
- Peptide Label: isoform X3
RefSeq Acc Id: XP_034797117   ⟸   XM_034941226
- Peptide Label: isoform X1
RefSeq Acc Id: XP_034797118   ⟸   XM_034941227
- Peptide Label: isoform X1
RefSeq Acc Id: ENSPPAP00000009316   ⟸   ENSPPAT00000031957
RefSeq Acc Id: ENSPPAP00000009310   ⟸   ENSPPAT00000031951
RefSeq Acc Id: ENSPPAP00000009315   ⟸   ENSPPAT00000031956
RefSeq Acc Id: ENSPPAP00000009314   ⟸   ENSPPAT00000031955


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000027856 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000009310 UniProtKB/TrEMBL
  ENSPPAP00000009314 UniProtKB/TrEMBL
  ENSPPAP00000009315 UniProtKB/TrEMBL
  ENSPPAP00000009316 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000031951 UniProtKB/TrEMBL
  ENSPPAT00000031955 UniProtKB/TrEMBL
  ENSPPAT00000031956 UniProtKB/TrEMBL
  ENSPPAT00000031957 UniProtKB/TrEMBL
InterPro LAT4 UniProtKB/TrEMBL
  MFS UniProtKB/TrEMBL
  MFS_trans_sf UniProtKB/TrEMBL
NCBI Gene SLC43A2 ENTREZGENE
PANTHER PTHR20766:SF2 UniProtKB/TrEMBL
Pfam MFS_1 UniProtKB/TrEMBL
Superfamily-SCOP SSF103473 UniProtKB/TrEMBL
UniProt A0A2R8ZWF6_PANPA UniProtKB/TrEMBL
  A0A2R8ZWG1_PANPA UniProtKB/TrEMBL
  A0A2R8ZWG9_PANPA UniProtKB/TrEMBL
  A0A2R9A229_PANPA UniProtKB/TrEMBL