ERP44 (endoplasmic reticulum protein 44) - Rat Genome Database

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Gene: ERP44 (endoplasmic reticulum protein 44) Pan paniscus
Analyze
Symbol: ERP44
Name: endoplasmic reticulum protein 44
RGD ID: 11993734
Description: ENCODES a protein that exhibits protein disulfide isomerase activity (inferred); INVOLVED IN glycoprotein metabolic process (inferred); protein folding (inferred); response to endoplasmic reticulum stress (inferred); ASSOCIATED WITH congenital disorder of glycosylation Ii (ortholog); congenital disorder of glycosylation type II (ortholog); congenital myasthenic syndrome 14 (ortholog); FOUND IN cell surface (inferred); endoplasmic reticulum lumen (inferred); endoplasmic reticulum membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: endoplasmic reticulum resident protein 44
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21139,362,223 - 39,481,896 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1939,364,594 - 39,484,267 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0971,062,078 - 71,185,195 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1999,182,352 - 99,301,938 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl999,182,352 - 99,301,938 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ERP44
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21139,362,223 - 39,481,896 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1939,364,594 - 39,484,267 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0971,062,078 - 71,185,195 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1999,182,352 - 99,301,938 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl999,182,352 - 99,301,938 (-)Ensemblpanpan1.1panPan2
ERP44
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38999,979,185 - 100,099,000 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl999,979,185 - 100,099,052 (-)EnsemblGRCh38hg38GRCh38
GRCh379102,741,467 - 102,861,282 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369101,781,282 - 101,901,151 (-)NCBINCBI36Build 36hg18NCBI36
Celera973,254,858 - 73,374,731 (-)NCBICelera
Cytogenetic Map9q31.1NCBI
HuRef972,340,490 - 72,460,508 (-)NCBIHuRef
CHM1_19102,887,925 - 103,007,771 (-)NCBICHM1_1
T2T-CHM13v2.09112,150,810 - 112,270,620 (-)NCBIT2T-CHM13v2.0
Erp44
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39448,190,711 - 48,279,635 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl448,193,323 - 48,279,558 (-)EnsemblGRCm39 Ensembl
GRCm38448,190,711 - 48,279,635 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl448,193,323 - 48,279,558 (-)EnsemblGRCm38mm10GRCm38
MGSCv37448,206,203 - 48,292,461 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36448,215,467 - 48,300,658 (-)NCBIMGSCv36mm8
Celera448,215,114 - 48,301,229 (-)NCBICelera
Cytogenetic Map4B1NCBI
cM Map426.09NCBI
Erp44
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8567,313,245 - 67,406,207 (-)NCBIGRCr8
mRatBN7.2562,516,550 - 62,610,762 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl562,516,551 - 62,610,761 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx564,492,222 - 64,585,236 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0566,311,515 - 66,404,538 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0566,280,980 - 66,374,000 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0563,937,866 - 64,030,827 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl563,937,784 - 64,030,901 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0568,455,221 - 68,548,182 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4564,869,536 - 64,962,569 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1564,874,574 - 64,967,608 (-)NCBI
Celera564,984,853 - 65,077,468 (+)NCBICelera
Cytogenetic Map5q22NCBI
Erp44
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541925,584,404 - 25,665,590 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541925,584,404 - 25,665,590 (+)NCBIChiLan1.0ChiLan1.0
ERP44
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11156,957,064 - 57,039,898 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1156,958,817 - 57,039,741 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1155,389,180 - 55,483,471 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01158,066,652 - 58,161,012 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1158,065,994 - 58,160,997 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11156,570,877 - 56,665,156 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01156,595,729 - 56,690,009 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01157,295,165 - 57,389,544 (-)NCBIUU_Cfam_GSD_1.0
Erp44
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947171,839,892 - 171,923,197 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365248,383,891 - 8,470,855 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365248,387,234 - 8,470,776 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ERP44
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1241,785,146 - 241,897,539 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11241,788,801 - 241,897,432 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21270,077,943 - 270,216,303 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ERP44
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11239,333,924 - 39,448,994 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1239,333,944 - 39,448,535 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660353,103,895 - 3,218,823 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Erp44
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624825866,077 - 959,146 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624825865,901 - 962,661 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003820636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000059504   ⟹   ENSPPAP00000036612
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl999,182,352 - 99,301,938 (-)Ensembl
RefSeq Acc Id: XM_003820636   ⟹   XP_003820684
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21139,362,223 - 39,481,896 (+)NCBI
NHGRI_mPanPan1939,364,594 - 39,484,267 (+)NCBI
Mhudiblu_PPA_v0971,062,078 - 71,185,195 (-)NCBI
PanPan1.1999,182,352 - 99,301,938 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003820684 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000036612
  ENSPPAP00000036612.1
Reference Protein Sequences
RefSeq Acc Id: XP_003820684   ⟸   XM_003820636
- UniProtKB: A0A2R9CE71 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000036612   ⟸   ENSPPAT00000059504
Protein Domains
Thioredoxin


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000041063 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000059504.1 UniProtKB/TrEMBL
Gene3D-CATH Glutaredoxin UniProtKB/TrEMBL
InterPro ERp44_PDI_b UniProtKB/TrEMBL
  ERp44_PDI_b UniProtKB/TrEMBL
  Thioredoxin-like_sf UniProtKB/TrEMBL
  Thioredoxin_domain UniProtKB/TrEMBL
KEGG Report pps:100988047 UniProtKB/TrEMBL
NCBI Gene ERP44 ENTREZGENE
PANTHER ENDOPLASMIC RETICULUM RESIDENT PROTEIN 44 UniProtKB/TrEMBL
  ENDOPLASMIC RETICULUM RESIDENT PROTEIN 44 UniProtKB/TrEMBL
Pfam Thioredoxin UniProtKB/TrEMBL
  Thioredoxin_6 UniProtKB/TrEMBL
PROSITE THIOREDOXIN_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF52833 UniProtKB/TrEMBL
UniProt A0A2R9CE71 ENTREZGENE, UniProtKB/TrEMBL