RCC2 (regulator of chromosome condensation 2) - Rat Genome Database

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Gene: RCC2 (regulator of chromosome condensation 2) Pan paniscus
Analyze
Symbol: RCC2
Name: regulator of chromosome condensation 2
RGD ID: 11992422
Description: ENCODES a protein that exhibits microtubule binding (ortholog); protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); chromosome passenger complex localization to kinetochore (ortholog); establishment of protein localization (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN chromosome, centromeric core domain (ortholog); early endosome membrane (ortholog); membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1117,409,432 - 17,440,769 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl117,409,432 - 17,432,031 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0116,353,770 - 16,386,810 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
RCC2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1117,409,432 - 17,440,769 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl117,409,432 - 17,432,031 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0116,353,770 - 16,386,810 (-)NCBIMhudiblu_PPA_v0panPan3
RCC2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl117,406,760 - 17,439,677 (-)EnsemblGRCh38hg38GRCh38
GRCh38117,406,760 - 17,439,677 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37117,733,256 - 17,766,173 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36117,605,866 - 17,638,807 (-)NCBINCBI36hg18NCBI36
Celera116,058,375 - 16,091,346 (-)NCBI
Cytogenetic Map1p36.13NCBI
HuRef115,979,184 - 16,012,475 (-)NCBIHuRef
CHM1_1117,841,584 - 17,874,664 (-)NCBICHM1_1
Rcc2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394140,427,308 - 140,450,531 (+)NCBIGRCm39mm39
GRCm39 Ensembl4140,427,852 - 140,450,531 (+)Ensembl
GRCm384140,701,473 - 140,723,220 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4140,700,541 - 140,723,220 (+)EnsemblGRCm38mm10GRCm38
MGSCv374140,257,388 - 140,279,135 (+)NCBIGRCm37mm9NCBIm37
MGSCv364139,973,618 - 139,993,551 (+)NCBImm8
Celera4142,511,445 - 142,534,864 (+)NCBICelera
Cytogenetic Map4D3NCBI
Rcc2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.25152,994,406 - 153,017,223 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl5152,993,665 - 153,017,205 (+)Ensembl
Rnor_6.05159,220,531 - 159,236,313 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5159,220,979 - 159,234,320 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05162,922,502 - 162,943,021 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45159,526,612 - 159,554,856 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15159,536,799 - 159,565,596 (+)NCBI
Celera5151,362,318 - 151,378,100 (+)NCBICelera
Cytogenetic Map5q36NCBI
Rcc2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555271,490,179 - 1,509,926 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555271,490,179 - 1,512,111 (+)NCBIChiLan1.0ChiLan1.0
RCC2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1280,865,091 - 80,887,819 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl280,869,369 - 80,885,928 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha277,400,956 - 77,425,467 (+)NCBI
ROS_Cfam_1.0281,511,360 - 81,535,816 (+)NCBI
UMICH_Zoey_3.1278,264,165 - 78,288,720 (+)NCBI
UNSW_CanFamBas_1.0279,279,812 - 79,304,315 (+)NCBI
UU_Cfam_GSD_1.0280,349,698 - 80,374,263 (+)NCBI
Rcc2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505838,440,791 - 38,482,501 (-)NCBI
SpeTri2.0NW_0049364744,265,572 - 4,307,283 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RCC2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl675,988,271 - 76,014,160 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1675,988,271 - 76,014,200 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2670,334,873 - 70,354,160 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RCC2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120115,139,279 - 115,171,872 (+)NCBIChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666033947,462 - 980,024 (-)NCBIVero_WHO_p1.0
Rcc2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247642,924,924 - 2,950,481 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000010526   ⟹   ENSPPAP00000002141
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl117,409,432 - 17,432,031 (-)Ensembl
RefSeq Acc Id: XM_034956643   ⟹   XP_034812534
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0116,353,770 - 16,386,810 (-)NCBI
RefSeq Acc Id: XM_034956649   ⟹   XP_034812540
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0116,353,770 - 16,386,491 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034812534 (Get FASTA)   NCBI Sequence Viewer  
  XP_034812540 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_034812534   ⟸   XM_034956643
RefSeq Acc Id: XP_034812540   ⟸   XM_034956649
RefSeq Acc Id: ENSPPAP00000002141   ⟸   ENSPPAT00000010526


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000009459 Ensembl, ENTREZGENE
NCBI Gene RCC2 ENTREZGENE