RALYL (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 7 | 99,928,419 - 100,659,109 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 75,557,563 - 76,291,638 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 80,714,397 - 81,448,302 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 8 | 82,329,769 - 83,059,678 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 8 | 82,669,573 - 83,058,749 (+) | Ensembl | panpan1.1 | | panPan2 | |
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RALYL (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 8 | 84,182,787 - 84,921,844 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 84,182,787 - 84,921,844 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 8 | 85,095,022 - 85,834,079 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 85,258,008 - 85,996,634 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 8 | 81,099,135 - 81,838,471 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | q21.2 | NCBI | | | | | HuRef | 8 | 80,586,998 - 81,326,356 (+) | NCBI | | HuRef | | | CHM1_1 | 8 | 85,146,832 - 85,885,899 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 84,620,396 - 85,359,723 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Ralyl (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 3 | 13,535,942 - 14,247,347 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 13,536,715 - 14,247,347 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 13,471,655 - 14,182,287 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 13,471,655 - 14,182,287 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 13,471,655 - 14,182,287 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 13,454,214 - 14,158,716 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 13,494,627 - 14,199,985 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | A1 | NCBI | | | | | cM Map | 3 | 3.01 | NCBI | | | | |
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Ralyl (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 2 | 89,390,212 - 90,181,681 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 87,482,747 - 88,274,329 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 87,482,755 - 88,274,452 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 93,999,573 - 94,249,056 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 92,120,575 - 92,370,064 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 87,177,384 - 87,426,873 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 89,039,990 - 89,842,784 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 89,041,591 - 89,310,946 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 108,812,284 - 109,612,384 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 89,038,365 - 89,323,703 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 88,983,334 - 89,268,665 (-) | NCBI | | | | | Celera | 2 | 83,253,263 - 83,502,901 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q23 | NCBI | | | | |
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Ralyl (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955417 | 2,409,841 - 2,747,944 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955417 | 2,123,050 - 2,747,906 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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RALYL (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 29 | 30,789,509 - 31,497,056 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 29 | 30,791,710 - 31,496,100 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 29 | 31,073,427 - 31,779,954 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 29 | 30,930,407 - 31,646,022 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 29 | 30,932,620 - 31,646,022 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 29 | 31,000,337 - 31,706,756 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 29 | 31,012,329 - 31,722,293 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 29 | 31,389,080 - 32,103,495 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ralyl (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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RALYL (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 4 | 51,785,380 - 52,558,442 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 51,785,372 - 52,559,659 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 56,868,098 - 57,058,792 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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RALYL (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 8 | 79,572,301 - 80,294,523 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 80,091,064 - 80,295,634 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666039 | 60,799,850 - 61,555,249 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ralyl (Heterocephalus glaber - naked mole-rat) |
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