JTB (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 1 | 95,852,705 - 95,857,737 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 95,587,948 - 95,592,980 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 129,331,335 - 129,334,873 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 132,959,843 - 132,964,227 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 132,959,843 - 132,963,865 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
JTB (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 1 | 153,974,269 - 153,977,674 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 153,974,269 - 153,977,674 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 153,946,745 - 153,950,150 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 152,213,369 - 152,217,075 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 150,759,819 - 150,763,524 | NCBI | | | | | Celera | 1 | 127,018,496 - 127,022,202 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q21.3 | NCBI | | | | | HuRef | 1 | 125,309,107 - 125,312,813 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 155,343,059 - 155,346,765 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 153,111,532 - 153,114,937 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Jtb (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 3 | 90,138,904 - 90,143,147 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 90,138,904 - 90,143,145 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 90,231,597 - 90,235,840 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 90,231,597 - 90,235,838 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 90,035,519 - 90,039,762 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 90,317,577 - 90,321,765 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 90,268,740 - 90,273,027 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | F1 | NCBI | | | | | cM Map | 3 | 39.21 | NCBI | | | | |
|
Jtb (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 2 | 177,983,033 - 177,987,250 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 175,685,392 - 175,689,609 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 175,684,993 - 175,690,108 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 182,825,337 - 182,829,557 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 180,847,725 - 180,851,945 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 175,447,928 - 175,452,228 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 189,591,707 - 189,595,926 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 189,591,780 - 189,596,421 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 209,024,504 - 209,028,723 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 182,471,061 - 182,476,268 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 182,421,166 - 182,426,374 (+) | NCBI | | | | | Celera | 2 | 169,621,457 - 169,625,128 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | q34 | NCBI | | | | |
|
Jtb (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955545 | 569,473 - 571,725 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955545 | 569,473 - 571,725 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
JTB (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 7 | 43,159,164 - 43,161,907 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 7 | 42,649,521 - 42,652,261 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 7 | 43,029,547 - 43,032,286 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 7 | 43,029,638 - 43,032,130 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 7 | 42,808,207 - 42,810,946 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 7 | 42,861,388 - 42,864,127 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 7 | 43,145,727 - 43,148,467 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Jtb (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
JTB (Sus scrofa - pig) |
|
JTB (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 20 | 9,828,542 - 9,838,990 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 9,829,085 - 9,838,819 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 9,204,388 - 9,208,564 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Jtb (Heterocephalus glaber - naked mole-rat) |
|