IDO2 (indoleamine 2,3-dioxygenase 2) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: IDO2 (indoleamine 2,3-dioxygenase 2) Pan paniscus
Analyze
Symbol: IDO2
Name: indoleamine 2,3-dioxygenase 2
RGD ID: 11983640
Description: ENCODES a protein that exhibits indoleamine 2,3-dioxygenase activity (ortholog); INVOLVED IN tryptophan catabolic process to kynurenine (ortholog); PARTICIPATES IN kynurenine metabolic pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Endotoxemia (ortholog); liver cirrhosis (ortholog); FOUND IN cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1836,657,311 - 36,717,606 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl836,665,240 - 36,717,420 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0839,149,045 - 39,209,671 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
IDO2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1836,657,311 - 36,717,606 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl836,665,240 - 36,717,420 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0839,149,045 - 39,209,671 (+)NCBIMhudiblu_PPA_v0panPan3
IDO2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl839,934,614 - 40,016,391 (+)EnsemblGRCh38hg38GRCh38
GRCh38839,934,955 - 40,016,391 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37839,792,474 - 39,873,910 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36839,911,631 - 39,993,067 (+)NCBINCBI36hg18NCBI36
Celera838,744,208 - 38,825,740 (+)NCBI
Cytogenetic Map8p11.21NCBI
HuRef838,325,410 - 38,406,972 (+)NCBIHuRef
CHM1_1839,839,074 - 39,920,934 (+)NCBICHM1_1
Ido2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39825,021,908 - 25,066,430 (-)NCBIGRCm39mm39
GRCm38824,531,892 - 24,576,414 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl824,531,892 - 24,576,333 (-)EnsemblGRCm38mm10GRCm38
MGSCv37825,642,364 - 25,686,805 (-)NCBIGRCm37mm9NCBIm37
MGSCv36825,997,999 - 26,041,878 (-)NCBImm8
Celera826,015,603 - 26,060,501 (-)NCBICelera
Cytogenetic Map8A2NCBI
Ido2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01672,232,852 - 72,291,227 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1672,268,943 - 72,289,156 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01671,883,093 - 71,936,202 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41671,907,113 - 71,932,910 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1665,358,465 - 65,396,778 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
Ido2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555362,894,308 - 2,939,016 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555362,894,410 - 2,938,862 (-)NCBIChiLan1.0ChiLan1.0
IDO2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1625,319,035 - 25,385,515 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11625,319,035 - 25,375,085 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Ido2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936843595,237 - 649,390 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IDO2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl179,277,069 - 9,343,749 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1179,277,039 - 9,344,405 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21710,830,092 - 10,897,040 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IDO2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl837,959,078 - 38,027,632 (+)Ensembl
ChlSab1.1837,951,810 - 38,027,689 (+)NCBI
Ido2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247803,620,899 - 3,668,351 (-)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008976953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000054481   ⟹   ENSPPAP00000031616
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl836,665,240 - 36,717,420 (+)Ensembl
RefSeq Acc Id: XM_008976953   ⟹   XP_008975201
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1836,657,311 - 36,717,606 (+)NCBI
Mhudiblu_PPA_v0839,149,045 - 39,209,671 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008975201 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_008975201   ⟸   XM_008976953
- Sequence:
RefSeq Acc Id: ENSPPAP00000031616   ⟸   ENSPPAT00000054481


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000038735 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000031616 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000054481 UniProtKB/TrEMBL
InterPro Indolamine_dOase UniProtKB/TrEMBL
  Trp/Indoleamine_2_3_dOase-like UniProtKB/TrEMBL
KEGG Report pps:100969906 UniProtKB/TrEMBL
NCBI Gene IDO2 ENTREZGENE
PANTHER PTHR28657 UniProtKB/TrEMBL
Pfam IDO UniProtKB/TrEMBL
Superfamily-SCOP SSF140959 UniProtKB/TrEMBL
UniProt A0A2R9BPN0_PANPA UniProtKB/TrEMBL