DCUN1D5 (defective in cullin neddylation 1 domain containing 5) - Rat Genome Database

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Gene: DCUN1D5 (defective in cullin neddylation 1 domain containing 5) Pan paniscus
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Symbol: DCUN1D5
Name: defective in cullin neddylation 1 domain containing 5
RGD ID: 11977627
Description: ENCODES a protein that exhibits cullin family protein binding (inferred); ubiquitin conjugating enzyme binding (inferred); ubiquitin-like protein binding (inferred); INVOLVED IN DNA damage response (inferred); positive regulation of protein neddylation (inferred); protein neddylation (inferred); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); ataxia telangiectasia (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (inferred); cytoskeleton (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: DCN1-like protein 5
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29103,860,929 - 103,891,065 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111104,949,280 - 104,979,376 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01197,996,643 - 98,038,108 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111101,481,472 - 101,522,920 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11101,493,113 - 101,522,920 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
DCUN1D5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29103,860,929 - 103,891,065 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111104,949,280 - 104,979,376 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01197,996,643 - 98,038,108 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111101,481,472 - 101,522,920 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11101,493,113 - 101,522,920 (-)Ensemblpanpan1.1panPan2
DCUN1D5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811103,050,686 - 103,092,160 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11103,050,686 - 103,092,194 (-)EnsemblGRCh38hg38GRCh38
GRCh3711102,921,415 - 102,962,889 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611102,438,031 - 102,468,079 (-)NCBINCBI36Build 36hg18NCBI36
Celera11100,082,951 - 100,124,478 (-)NCBICelera
Cytogenetic Map11q22.3NCBI
HuRef1198,850,127 - 98,891,660 (-)NCBIHuRef
CHM1_111102,804,380 - 102,845,910 (-)NCBICHM1_1
T2T-CHM13v2.011103,054,420 - 103,095,887 (-)NCBIT2T-CHM13v2.0
Dcun1d5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3997,176,590 - 7,220,880 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl97,184,520 - 7,208,205 (+)EnsemblGRCm39 Ensembl
GRCm3897,176,590 - 7,220,880 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl97,184,520 - 7,208,205 (+)EnsemblGRCm38mm10GRCm38
MGSCv3797,184,566 - 7,207,031 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3697,184,566 - 7,207,031 (+)NCBIMGSCv36mm8
Celera94,587,683 - 4,610,118 (+)NCBICelera
Cytogenetic Map9A1NCBI
cM Map92.46NCBI
Dcun1d5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8812,697,160 - 12,718,242 (+)NCBIGRCr8
mRatBN7.284,412,266 - 4,433,380 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl84,412,221 - 4,433,367 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx88,371,760 - 8,392,848 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.086,669,543 - 6,690,631 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.084,671,942 - 4,693,024 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.085,437,071 - 5,458,152 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl85,437,071 - 5,458,152 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.085,444,112 - 5,465,193 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.484,072,746 - 4,094,149 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.184,072,745 - 4,094,149 (+)NCBI
Celera85,976,086 - 5,997,168 (+)NCBICelera
Cytogenetic Map8q11NCBI
Dcun1d5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554126,185,858 - 6,217,935 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554126,185,858 - 6,217,935 (-)NCBIChiLan1.0ChiLan1.0
DCUN1D5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1528,740,154 - 28,767,526 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl528,740,087 - 28,766,858 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha528,686,248 - 28,713,846 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0528,791,096 - 28,818,703 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl528,791,138 - 28,819,007 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1528,826,023 - 28,853,622 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0528,705,876 - 28,733,470 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0528,880,323 - 28,907,920 (+)NCBIUU_Cfam_GSD_1.0
Dcun1d5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494786,561,146 - 86,600,179 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365514,936,293 - 4,966,088 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365514,936,337 - 4,966,053 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DCUN1D5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl933,674,268 - 33,707,618 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1933,674,524 - 33,707,648 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2937,621,897 - 37,651,183 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DCUN1D5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1194,436,498 - 94,467,003 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl194,436,784 - 94,466,989 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604331,402,889 - 31,443,401 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dcun1d5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249182,090,733 - 2,123,926 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249182,090,727 - 2,123,926 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000036404   ⟹   ENSPPAP00000013730
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl11101,493,113 - 101,522,920 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000036408   ⟹   ENSPPAP00000013734
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl11101,493,113 - 101,522,582 (-)Ensembl
RefSeq Acc Id: XM_003828372   ⟹   XP_003828420
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v29103,860,929 - 103,891,065 (-)NCBI
NHGRI_mPanPan111104,949,280 - 104,979,376 (-)NCBI
Mhudiblu_PPA_v01197,996,643 - 98,038,108 (-)NCBI
PanPan1.111101,482,352 - 101,522,920 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008953767   ⟹   XP_008952015
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v29103,860,929 - 103,890,648 (-)NCBI
NHGRI_mPanPan111104,949,280 - 104,978,989 (-)NCBI
Mhudiblu_PPA_v01197,996,643 - 98,038,107 (-)NCBI
PanPan1.111101,481,472 - 101,522,920 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034933599   ⟹   XP_034789490
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v29103,860,929 - 103,890,463 (-)NCBI
NHGRI_mPanPan111104,949,280 - 104,978,802 (-)NCBI
Mhudiblu_PPA_v01198,008,009 - 98,037,532 (-)NCBI
Protein Sequences
Protein RefSeqs XP_003828420 (Get FASTA)   NCBI Sequence Viewer  
  XP_008952015 (Get FASTA)   NCBI Sequence Viewer  
  XP_034789490 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000013730
  ENSPPAP00000013730.1
  ENSPPAP00000013734.1
Reference Protein Sequences
RefSeq Acc Id: XP_003828420   ⟸   XM_003828372
- Peptide Label: isoform X1
- UniProtKB: A0A2R9A8Y7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008952015   ⟸   XM_008953767
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_034789490   ⟸   XM_034933599
- Peptide Label: isoform X2
RefSeq Acc Id: ENSPPAP00000013734   ⟸   ENSPPAT00000036408
RefSeq Acc Id: ENSPPAP00000013730   ⟸   ENSPPAT00000036404
Protein Domains
DCUN1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000030025 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000036404.1 UniProtKB/TrEMBL
  ENSPPAT00000036408.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.238.200 UniProtKB/TrEMBL
  EF-hand UniProtKB/TrEMBL
InterPro DCN-prot UniProtKB/TrEMBL
  DCN1-like_PONY UniProtKB/TrEMBL
  PONY_dom UniProtKB/TrEMBL
KEGG Report pps:100994234 UniProtKB/TrEMBL
NCBI Gene DCUN1D5 ENTREZGENE
PANTHER DCN1-LIKE PROTEIN 5 UniProtKB/TrEMBL
  PTHR12281 UniProtKB/TrEMBL
Pfam Cullin_binding UniProtKB/TrEMBL
PROSITE DCUN1 UniProtKB/TrEMBL
UniProt A0A2R9A8Y7 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9A8Z0_PANPA UniProtKB/TrEMBL