LOC100972973 (olfactory receptor 5H6) - Rat Genome Database

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Pathways
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Gene: LOC100972973 (olfactory receptor 5H6) Pan paniscus
Analyze
Symbol: LOC100972973 (Ensembl: OR5H6)
Name: olfactory receptor 5H6 (Ensembl:olfactory receptor family 5 subfamily H member 6)
RGD ID: 11977175
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); odorant binding (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2296,198,699 - 96,199,808 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1396,203,482 - 96,204,591 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0395,358,258 - 95,359,355 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13102,041,867 - 102,042,964 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3102,041,902 - 102,042,879 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003821891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000000485   ⟹   ENSPPAP00000000124
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl3102,041,902 - 102,042,879 (+)Ensembl
RefSeq Acc Id: XM_003821891   ⟹   XP_003821939
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2296,198,699 - 96,199,808 (+)NCBI
NHGRI_mPanPan1396,203,482 - 96,204,591 (+)NCBI
Mhudiblu_PPA_v0395,358,258 - 95,359,355 (+)NCBI
PanPan1.13102,041,867 - 102,042,964 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003821939 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000000124.1
Reference Protein Sequences
RefSeq Acc Id: XP_003821939   ⟸   XM_003821891
- UniProtKB: A0A2R8Z9P1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000000124   ⟸   ENSPPAT00000000485
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000000479 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000000485.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report pps:100972973 UniProtKB/TrEMBL
NCBI Gene LOC100972973 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 5H6 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A2R8Z9P1 ENTREZGENE, UniProtKB/TrEMBL