OLIG2 (oligodendrocyte transcription factor 2) - Rat Genome Database

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Gene: OLIG2 (oligodendrocyte transcription factor 2) Pan paniscus
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Symbol: OLIG2
Name: oligodendrocyte transcription factor 2
RGD ID: 11972735
Description: ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); HMG box domain binding (ortholog); INVOLVED IN myelination (ortholog); negative regulation of neuron differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); autosomal dominant intellectual developmental disorder 7 (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: oligodendrocyte lineage transcription factor 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22229,138,290 - 29,141,729 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12123,998,222 - 24,001,643 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02119,387,860 - 19,391,291 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12132,766,039 - 32,769,408 (+)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
OLIG2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22229,138,290 - 29,141,729 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12123,998,222 - 24,001,643 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02119,387,860 - 19,391,291 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12132,766,039 - 32,769,408 (+)NCBIpanpan1.1PanPan1.1panPan2
OLIG2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382133,025,935 - 33,029,185 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2133,025,935 - 33,029,196 (+)EnsemblGRCh38hg38GRCh38
GRCh372134,398,243 - 34,401,493 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362133,320,109 - 33,323,370 (+)NCBINCBI36Build 36hg18NCBI36
Build 342133,320,162 - 33,323,371NCBI
Celera2119,583,840 - 19,587,101 (+)NCBICelera
Cytogenetic Map21q22.11NCBI
HuRef2119,809,438 - 19,812,730 (+)NCBIHuRef
CHM1_12133,960,322 - 33,963,610 (+)NCBICHM1_1
T2T-CHM13v2.02131,394,108 - 31,397,358 (+)NCBIT2T-CHM13v2.0
Olig2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391691,016,745 - 91,025,567 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1691,022,345 - 91,025,565 (+)EnsemblGRCm39 Ensembl
GRCm381691,225,550 - 91,228,677 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1691,225,457 - 91,228,677 (+)EnsemblGRCm38mm10GRCm38
MGSCv371691,225,795 - 91,228,922 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361691,114,409 - 91,117,536 (+)NCBIMGSCv36mm8
Celera1692,308,914 - 92,312,041 (+)NCBICelera
Cytogenetic Map16C3.3NCBI
cM Map1652.6NCBI
Olig2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81143,961,585 - 43,964,961 (+)NCBIGRCr8
mRatBN7.21130,475,510 - 30,478,886 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1130,475,398 - 30,480,152 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1139,162,510 - 39,165,873 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01131,833,948 - 31,837,317 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01131,008,354 - 31,011,714 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01131,389,514 - 31,392,890 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1131,389,514 - 31,392,890 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01134,998,542 - 35,001,918 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41131,205,416 - 31,208,792 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11131,244,022 - 31,245,269 (+)NCBI
Celera1130,143,763 - 30,147,131 (+)NCBICelera
Cytogenetic Map11q11NCBI
Olig2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540732,433,849 - 32,434,923 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540732,432,888 - 32,436,209 (+)NCBIChiLan1.0ChiLan1.0
OLIG2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13127,674,112 - 27,677,521 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3127,674,107 - 27,676,822 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3127,667,931 - 27,670,007 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03127,878,129 - 27,880,215 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3127,878,117 - 27,880,829 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13127,745,936 - 27,748,017 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03127,755,719 - 27,757,790 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03128,259,002 - 28,261,083 (+)NCBIUU_Cfam_GSD_1.0
Olig2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497128,219,922 - 28,222,625 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365009,245,880 - 9,247,756 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365009,244,595 - 9,247,756 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
OLIG2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13196,599,822 - 196,600,793 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113196,596,838 - 196,602,197 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213206,661,824 - 206,663,897 (+)NCBISscrofa10.2Sscrofa10.2susScr3
OLIG2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1259,151,151 - 59,161,253 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl259,152,487 - 59,153,458 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660711,690,456 - 1,693,867 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Olig2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474521,270,965 - 21,272,932 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474521,270,804 - 21,274,225 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: XM_003823992   ⟹   XP_003824040
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22229,138,290 - 29,141,729 (+)NCBI
NHGRI_mPanPan12123,998,222 - 24,001,643 (+)NCBI
Mhudiblu_PPA_v02119,387,860 - 19,391,291 (+)NCBI
PanPan1.12132,766,039 - 32,769,408 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003824040 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_003824040   ⟸   XM_003823992
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene OLIG2 ENTREZGENE