LOC100987460 (olfactory receptor 52E8) - Rat Genome Database

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Gene: LOC100987460 (olfactory receptor 52E8) Pan paniscus
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Symbol: LOC100987460 (Ensembl: OR52E8)
Name: olfactory receptor 52E8 (Ensembl:olfactory receptor family 52 subfamily E member 8)
RGD ID: 11972440
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v298,295,392 - 8,296,345 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1118,253,041 - 8,253,994 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0115,991,273 - 5,992,321 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1115,672,436 - 5,673,484 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl115,672,505 - 5,673,458 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003819055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSPPAT00000012550   ⟹   ENSPPAP00000002647
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl115,672,505 - 5,673,458 (-)Ensembl
RefSeq Acc Id: XM_003819055   ⟹   XP_003819103
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v298,295,392 - 8,296,345 (-)NCBI
NHGRI_mPanPan1118,253,041 - 8,253,994 (-)NCBI
Mhudiblu_PPA_v0115,991,273 - 5,992,321 (-)NCBI
PanPan1.1115,672,436 - 5,673,484 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003819103 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000002647
  ENSPPAP00000002647.1
RefSeq Acc Id: XP_003819103   ⟸   XM_003819055
- UniProtKB: A0A2R8ZCN6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000002647   ⟸   ENSPPAT00000012550

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000011541 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000012550.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report pps:100987460 UniProtKB/TrEMBL
NCBI Gene LOC100987460 ENTREZGENE
PANTHER OLFACTORY RECEPTOR 52E8 UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 56B1-RELATED UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A2R8ZCN6 ENTREZGENE, UniProtKB/TrEMBL