ANKRD44 (ankyrin repeat domain 44) - Rat Genome Database

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Gene: ANKRD44 (ankyrin repeat domain 44) Pan paniscus
Analyze
Symbol: ANKRD44
Name: ankyrin repeat domain 44
RGD ID: 11970307
Description: INVOLVED IN protein localization to ciliary inversin compartment (inferred); ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN ciliary inversin compartment (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21399,580,890 - 99,924,995 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B99,595,881 - 99,939,986 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B84,230,570 - 84,554,326 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B202,128,829 - 202,328,703 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B202,128,829 - 202,331,534 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ANKRD44
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21399,580,890 - 99,924,995 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B99,595,881 - 99,939,986 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B84,230,570 - 84,554,326 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B202,128,829 - 202,328,703 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B202,128,829 - 202,331,534 (-)Ensemblpanpan1.1panPan2
ANKRD44
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382196,967,014 - 197,310,780 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2196,967,017 - 197,311,173 (-)EnsemblGRCh38hg38GRCh38
GRCh372197,851,386 - 198,175,504 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362197,567,495 - 197,771,007 (-)NCBINCBI36Build 36hg18NCBI36
Celera2191,615,131 - 191,818,640 (-)NCBICelera
Cytogenetic Map2q33.1NCBI
HuRef2189,704,373 - 189,904,880 (-)NCBIHuRef
CHM1_12197,857,237 - 198,181,262 (-)NCBICHM1_1
T2T-CHM13v2.02197,446,277 - 197,794,518 (-)NCBIT2T-CHM13v2.0
Ankrd44
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39154,684,499 - 54,968,142 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl154,684,499 - 54,965,546 (-)EnsemblGRCm39 Ensembl
GRCm38154,645,340 - 54,928,983 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl154,645,340 - 54,926,387 (-)EnsemblGRCm38mm10GRCm38
MGSCv37154,702,184 - 54,983,231 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36154,589,885 - 54,870,932 (-)NCBIMGSCv36mm8
Celera155,170,354 - 55,451,587 (-)NCBICelera
Cytogenetic Map1C1.2NCBI
cM Map127.7NCBI
Ankrd44
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8963,621,193 - 63,921,999 (-)NCBIGRCr8
mRatBN7.2956,126,746 - 56,427,661 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl956,126,747 - 56,427,508 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx964,650,438 - 64,938,126 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0969,766,336 - 70,054,024 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0968,051,783 - 68,345,438 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0961,229,252 - 61,529,532 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl961,231,988 - 61,528,882 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0960,910,883 - 61,100,315 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4953,425,161 - 53,622,961 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera953,619,185 - 53,910,099 (-)NCBICelera
Cytogenetic Map9q31NCBI
Ankrd44
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554033,299,083 - 3,462,661 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554033,228,360 - 3,476,988 (+)NCBIChiLan1.0ChiLan1.0
ANKRD44
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1376,500,741 - 6,756,505 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl376,541,554 - 6,753,028 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha377,448,149 - 7,811,318 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0376,391,070 - 6,755,454 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl376,390,418 - 6,755,458 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1376,390,678 - 6,754,530 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0376,357,832 - 6,721,346 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0376,379,412 - 6,744,626 (-)NCBIUU_Cfam_GSD_1.0
Ankrd44
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303154,665,244 - 154,957,989 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365061,879,955 - 2,167,675 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365061,880,001 - 2,167,663 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKRD44
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15100,868,472 - 101,211,242 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115100,868,469 - 101,211,172 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215112,049,216 - 112,388,834 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ANKRD44
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11082,476,650 - 82,817,635 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1082,501,795 - 82,817,629 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040116,621,650 - 116,956,462 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ankrd44
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248892,883,624 - 3,124,709 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248892,883,639 - 3,126,011 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000043628   ⟹   ENSPPAP00000020831
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2B202,128,829 - 202,328,702 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000043644   ⟹   ENSPPAP00000020847
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2B202,131,750 - 202,331,534 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000043651   ⟹   ENSPPAP00000020854
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2B202,153,073 - 202,267,766 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000043660   ⟹   ENSPPAP00000020863
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2B202,220,664 - 202,328,696 (-)Ensembl
RefSeq Acc Id: XM_034954726   ⟹   XP_034810617
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21399,606,503 - 99,924,977 (-)NCBI
NHGRI_mPanPan12B99,621,498 - 99,939,986 (-)NCBI
Mhudiblu_PPA_v02B84,230,578 - 84,554,219 (-)NCBI
RefSeq Acc Id: XM_034954727   ⟹   XP_034810618
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21399,606,503 - 99,924,977 (-)NCBI
NHGRI_mPanPan12B99,621,498 - 99,939,971 (-)NCBI
Mhudiblu_PPA_v02B84,230,578 - 84,554,219 (-)NCBI
RefSeq Acc Id: XM_034954728   ⟹   XP_034810619
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21399,606,503 - 99,924,977 (-)NCBI
NHGRI_mPanPan12B99,621,498 - 99,939,971 (-)NCBI
Mhudiblu_PPA_v02B84,230,570 - 84,554,325 (-)NCBI
RefSeq Acc Id: XM_034954729   ⟹   XP_034810620
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21399,606,503 - 99,924,976 (-)NCBI
NHGRI_mPanPan12B99,621,498 - 99,939,970 (-)NCBI
Mhudiblu_PPA_v02B84,230,578 - 84,554,219 (-)NCBI
RefSeq Acc Id: XM_057301464   ⟹   XP_057157447
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21399,580,890 - 99,924,995 (-)NCBI
NHGRI_mPanPan12B99,595,881 - 99,939,986 (-)NCBI
RefSeq Acc Id: XM_063595508   ⟹   XP_063451578
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21399,606,503 - 99,924,977 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_034810619   ⟸   XM_034954728
- Peptide Label: isoform X3
RefSeq Acc Id: XP_034810620   ⟸   XM_034954729
- Peptide Label: isoform X5
RefSeq Acc Id: XP_034810618   ⟸   XM_034954727
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034810617   ⟸   XM_034954726
- Peptide Label: isoform X1
RefSeq Acc Id: ENSPPAP00000020831   ⟸   ENSPPAT00000043628
RefSeq Acc Id: ENSPPAP00000020847   ⟸   ENSPPAT00000043644
RefSeq Acc Id: ENSPPAP00000020854   ⟸   ENSPPAT00000043651
RefSeq Acc Id: ENSPPAP00000020863   ⟸   ENSPPAT00000043660
RefSeq Acc Id: XP_057157447   ⟸   XM_057301464
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063451578   ⟸   XM_063595508
- Peptide Label: isoform X6


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000033556 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000043628.1 UniProtKB/TrEMBL
  ENSPPAT00000043644.1 UniProtKB/TrEMBL
  ENSPPAT00000043651.1 UniProtKB/TrEMBL
  ENSPPAT00000043660.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
NCBI Gene ANKRD44 ENTREZGENE
PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED UniProtKB/TrEMBL
  ANKYRIN REPEAT-CONTAINING UniProtKB/TrEMBL
  MOLTING PROTEIN MLT-4 UniProtKB/TrEMBL
  SERINE_THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY ANKYRIN REPEAT SUBUNIT B UniProtKB/TrEMBL
  SERINE_THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY ANKYRIN REPEAT SUBUNIT C UniProtKB/TrEMBL
  TRANSIENT RECEPTOR POTENTIAL CHANNEL PYREXIA UniProtKB/TrEMBL
Pfam Ank UniProtKB/TrEMBL
  Ank_2 UniProtKB/TrEMBL
  Ank_4 UniProtKB/TrEMBL
PRINTS ANKYRIN UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/TrEMBL
UniProt A0A2R9AU44_PANPA UniProtKB/TrEMBL
  A0A2R9AU58_PANPA UniProtKB/TrEMBL
  A0A2R9AUI6_PANPA UniProtKB/TrEMBL
  A0A2R9B0D8_PANPA UniProtKB/TrEMBL